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PI0002522 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002522
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr05:14119789..14129352
RNA-Seq ExpressionPI0002522
SyntenyPI0002522
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031742890.1 uncharacterized protein LOC116404512 [Cucumis sativus]5.7e-0532.24Show/hide
Query:  LGKYRWVLGMPITMTAWFSLYSLGLNVRFVVKVLEPSSRENCNSPPTQGRRCRECFSAAFQGARRG-GRG----GRGADQAQSVEPPVEQNVNPAAPVTQ
        LG+Y W   +       F   +  +++ F V +   + R +    P +G           +G RRG GRG    GRGA + Q  E   EQ + PAAPVT 
Subjt:  LGKYRWVLGMPITMTAWFSLYSLGLNVRFVVKVLEPSSRENCNSPPTQGRRCRECFSAAFQGARRG-GRG----GRGADQAQSVEPPVEQNVNPAAPVTQ

Query:  ADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPS
         +  ALS  +E RF +++T   + N Q P +P  P++PP+  A P+  +PP+
Subjt:  ADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPS

XP_031743557.1 uncharacterized protein LOC116404620 isoform X1 [Cucumis sativus]3.3e-0543.82Show/hide
Query:  QGARRGGRGGR--GADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPS
        +G RRGGR GR  GA + Q  E   EQ V P APVT  + AALS  +E RF +++T   + N Q P +P  P++PP+  A P+  +PP+
Subjt:  QGARRGGRGGR--GADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPS

XP_031743561.1 uncharacterized protein LOC116404620 isoform X2 [Cucumis sativus]3.3e-0543.82Show/hide
Query:  QGARRGGRGGR--GADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPS
        +G RRGGR GR  GA + Q  E   EQ V P APVT  + AALS  +E RF +++T   + N Q P +P  P++PP+  A P+  +PP+
Subjt:  QGARRGGRGGR--GADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPS

XP_031745519.1 oleosin-B6-like [Cucumis sativus]5.7e-0532.24Show/hide
Query:  LGKYRWVLGMPITMTAWFSLYSLGLNVRFVVKVLEPSSRENCNSPPTQGRRCRECFSAAFQGARRG-GRG----GRGADQAQSVEPPVEQNVNPAAPVTQ
        LG+Y W   +       F   +  +++ F V +   + R +    P +G           +G RRG GRG    GRGA + Q  E   EQ + PAAPVT 
Subjt:  LGKYRWVLGMPITMTAWFSLYSLGLNVRFVVKVLEPSSRENCNSPPTQGRRCRECFSAAFQGARRG-GRG----GRGADQAQSVEPPVEQNVNPAAPVTQ

Query:  ADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPS
         +  ALS  +E RF +++T   + N Q P +P  P++PP+  A P+  +PP+
Subjt:  ADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPS

TrEMBL top hitse value%identityAlignment
A0A5A7T5I2 Gag protease polyprotein8.9e-0444.44Show/hide
Query:  QGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPSP
        +GARRGGRG  GRGA + Q    PV Q  +PAAPVT ADLAA    +E RF D++ Q        P  P    +P L+ A P+    P P
Subjt:  QGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPSP

A0A5A7TXM6 Reverse transcriptase8.9e-0444.44Show/hide
Query:  QGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPSP
        +GARRGGRG  GRGA + Q    PV +  +PAAPVT ADLAA    +E RF D++ Q        P  P L   P  +QA P+    P P
Subjt:  QGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPSP

A0A5A7V1L1 Reverse transcriptase6.8e-0449.37Show/hide
Query:  QGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQ-TPHLPHLPLLPPLI
        +GARRGGRG  GRGA + Q    PV Q  +PAAPVT ADLAA    +E RFMD++ Q      Q  P  P L   P L+
Subjt:  QGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQ-TPHLPHLPLLPPLI

A0A5A7VKY9 Reverse transcriptase6.8e-0435Show/hide
Query:  MTAWFSLYSLGLNVRFVVK-VLEPSSRENCNSPPTQGRRCRECFSAAFQGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFM
        +TA  SL ++G    F  K   +   +      PT+GR+  E   +  +GARRGGRG  GRGA + Q    PV Q  +PAAPVT ADLAA    +E RF 
Subjt:  MTAWFSLYSLGLNVRFVVK-VLEPSSRENCNSPPTQGRRCRECFSAAFQGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFM

Query:  DIVTQKTSNNVQ------TPHLPHLPLLPPLIQANPSRQS
        D++ Q      Q      +P    +P++P ++  + S ++
Subjt:  DIVTQKTSNNVQ------TPHLPHLPLLPPLIQANPSRQS

A0A5D3C4U9 Reverse transcriptase6.8e-0449.37Show/hide
Query:  QGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQ-TPHLPHLPLLPPLI
        +GARRGGRG  GRGA + Q    PV Q  +PAAPVT ADLAA    +E RFMD++ Q      Q  P  P L   P L+
Subjt:  QGARRGGRG--GRGADQAQSVEPPVEQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQ-TPHLPHLPLLPPLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAAGACCTCGTACAACGTGCAGACCCCTCATCTTCCTCTTCTCCTCTTCTTCCTCCTCTCATCCAAGCAAACTCTAGCCGCCAGCCGCCGCCGCCAGTCACCGC
CGTCGCCCTACTTTTTCCGATCGCGAACCACCGCCAGCAGCCGCGCCGTTCGTCCGCGTCCCACCGCCAGCCGTCGCGCCGTTCGTCCGCGCCCAGCCGCGCCGTTCGTC
CGGGTTTCCCCAGCCGCGAGCCGGTCGCGTTCCCCAGCCGCGAGCCGTCCGCGATCCCCCAACGCTGCGCCGTCTGCCGCGATCCTTCAGCCGCTGCGCCGCGCCGCCCG
CCAGTCGCTCACCTTTCGCCTGCCGCCGATCAAATCGTGTTGACCCTCCTCCTTGTGAGCCATTTGAGCTTTTGTGGCTACCTTGGTAAGTATCGATGGGTTCTTGGGAT
GCCCATCACCATGACTGCTTGGTTCTCCTTGTATAGTCTTGGTCTTAATGTTAGGTTTGTTGTGAAGGTCTTGGAGCCAAGCAGCAGAGAGAACTGCAATTCGCCTCCCA
CTCAAGGTCGTCGGTGTAGGGAGTGTTTCTCAGCAGCCTTTCAGGGTGCACGAAGGGGAGGTCGTGGAGGTCGAGGTGCGGATCAAGCTCAGTCTGTCGAGCCGCCTGTC
GAGCAGAATGTCAACCCTGCGGCACCCGTTACTCAGGCTGATCTAGCCGCCTTATCCAACCAGTTAGAGCCGCGATTCATGGACATTGTGACCCAGAAGACCTCGAACAA
CGTGCAGACCCCTCATCTTCCTCATCTTCCTCTTCTTCCTCCTCTCATCCAAGCAAACCCTAGCCGCCAGTCACCGCCGTCGCCCTACTTTTTCCGATCGCGAACCACGC
CAGCAGTCGCGCCGTTCGTCCGCATTTCCCTAGCCGCGAGCCGTCCGCGATCCCCCAGCGCCGCGCTGTCTGCCGCGATCCTTCAGCCGCTGCGCCGCGCCGCCCGCCAG
CCGCTCACCCTTCGCCTGCCGCCGATCAAATCGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAAGACCTCGTACAACGTGCAGACCCCTCATCTTCCTCTTCTCCTCTTCTTCCTCCTCTCATCCAAGCAAACTCTAGCCGCCAGCCGCCGCCGCCAGTCACCGC
CGTCGCCCTACTTTTTCCGATCGCGAACCACCGCCAGCAGCCGCGCCGTTCGTCCGCGTCCCACCGCCAGCCGTCGCGCCGTTCGTCCGCGCCCAGCCGCGCCGTTCGTC
CGGGTTTCCCCAGCCGCGAGCCGGTCGCGTTCCCCAGCCGCGAGCCGTCCGCGATCCCCCAACGCTGCGCCGTCTGCCGCGATCCTTCAGCCGCTGCGCCGCGCCGCCCG
CCAGTCGCTCACCTTTCGCCTGCCGCCGATCAAATCGTGTTGACCCTCCTCCTTGTGAGCCATTTGAGCTTTTGTGGCTACCTTGGTAAGTATCGATGGGTTCTTGGGAT
GCCCATCACCATGACTGCTTGGTTCTCCTTGTATAGTCTTGGTCTTAATGTTAGGTTTGTTGTGAAGGTCTTGGAGCCAAGCAGCAGAGAGAACTGCAATTCGCCTCCCA
CTCAAGGTCGTCGGTGTAGGGAGTGTTTCTCAGCAGCCTTTCAGGGTGCACGAAGGGGAGGTCGTGGAGGTCGAGGTGCGGATCAAGCTCAGTCTGTCGAGCCGCCTGTC
GAGCAGAATGTCAACCCTGCGGCACCCGTTACTCAGGCTGATCTAGCCGCCTTATCCAACCAGTTAGAGCCGCGATTCATGGACATTGTGACCCAGAAGACCTCGAACAA
CGTGCAGACCCCTCATCTTCCTCATCTTCCTCTTCTTCCTCCTCTCATCCAAGCAAACCCTAGCCGCCAGTCACCGCCGTCGCCCTACTTTTTCCGATCGCGAACCACGC
CAGCAGTCGCGCCGTTCGTCCGCATTTCCCTAGCCGCGAGCCGTCCGCGATCCCCCAGCGCCGCGCTGTCTGCCGCGATCCTTCAGCCGCTGCGCCGCGCCGCCCGCCAG
CCGCTCACCCTTCGCCTGCCGCCGATCAAATCGTGTTGA
Protein sequenceShow/hide protein sequence
MTKDLVQRADPSSSSSPLLPPLIQANSSRQPPPPVTAVALLFPIANHRQQPRRSSASHRQPSRRSSAPSRAVRPGFPSREPVAFPSREPSAIPQRCAVCRDPSAAAPRRP
PVAHLSPAADQIVLTLLLVSHLSFCGYLGKYRWVLGMPITMTAWFSLYSLGLNVRFVVKVLEPSSRENCNSPPTQGRRCRECFSAAFQGARRGGRGGRGADQAQSVEPPV
EQNVNPAAPVTQADLAALSNQLEPRFMDIVTQKTSNNVQTPHLPHLPLLPPLIQANPSRQSPPSPYFFRSRTTPAVAPFVRISLAASRPRSPSAALSAAILQPLRRAARQ
PLTLRLPPIKSC