CuGenDBv2

Gene ID	PI0002580
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Mitochondrial ribosomal protein L37
Genome location	chr08:11292602..11300966
RNA-Seq Expression	PI0002580
Synteny	PI0002580
Gene Ontology terms	GO:0005762 - mitochondrial large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR013870 - Ribosomal protein L37, mitochondrial

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8649745.1 hypothetical protein Csa_012025 [Cucumis sativus]

1.9e-57

93.08

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIRLFRRNIIVSSK+LIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVG NILKEGADPKIMADSEYP WLW+LL+KHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        AESL Y DLKRF+KLD RARIKENNSIKAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

XP_004144674.3 39S ribosomal protein L54, mitochondrial [Cucumis sativus]

1.9e-57

93.08

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIRLFRRNIIVSSK+LIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVG NILKEGADPKIMADSEYP WLW+LL+KHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        AESL Y DLKRF+KLD RARIKENNSIKAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

XP_008442187.1 PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]

2.9e-58

93.85

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIR FRRNIIVSSKDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVG NILKEGADPKIMADSEYP WLWHLLDKHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        AESL Y DL+RFVKLD RARIKENNSIKAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

XP_016899597.1 PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]

2.9e-58

93.85

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIR FRRNIIVSSKDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVG NILKEGADPKIMADSEYP WLWHLLDKHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        AESL Y DL+RFVKLD RARIKENNSIKAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]

4.4e-54

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIRLFRR+ IV+SKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKAS LSKEVKSTTVVG NILKEGADPKIMADSEYP WLWHLLDKHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
         E+L Y DLKRFVKLD RA+IKENNS KAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYS4 Uncharacterized protein

1.2e-57

92.31

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQ+RLFRRNIIVSSK+LIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVG NILKEGADPKIMADSEYP WLW+LL+KHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        AESL Y DLKRF+KLD RARIKENNSIKAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X2

1.4e-58

93.85

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIR FRRNIIVSSKDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVG NILKEGADPKIMADSEYP WLWHLLDKHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        AESL Y DL+RFVKLD RARIKENNSIKAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

A0A1S4DUD4 39S ribosomal protein L54, mitochondrial isoform X1

1.4e-58

93.85

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIR FRRNIIVSSKDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVG NILKEGADPKIMADSEYP WLWHLLDKHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        AESL Y DL+RFVKLD RARIKENNSIKAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

A0A5D3CXE8 39S ribosomal protein L54

1.4e-58

93.85

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIR FRRNIIVSSKDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVG NILKEGADPKIMADSEYP WLWHLLDKHPPLSELRRKN
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        AESL Y DL+RFVKLD RARIKENNSIKAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like

1.0e-48

82.31

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Query:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN
        SQIRLFRR+++ ++KDLI+LT+VRTFAAGGK KKGSKGGAA DAPKASILSKEVKSTTVVG NILKEGADPK+MADSEYPDWLW L+DK P LSELRRK+
Subjt:  SQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKN

Query:  AESLSYGDLKRFVKLDNRARIKENNSIKAK
        A++L Y DLKRFVKLD RARIKENNS KAK
Subjt:  AESLSYGDLKRFVKLDNRARIKENNSIKAK

SwissProt top hits

e value

%identity

Alignment

P36532 54S ribosomal protein L37, mitochondrial

7.4e-04

36.51

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Query:  NILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNAESLSYGDLKRFVKLDNRARIKENN
        NI K G D   + D EYP+WLW +LD    + E   ++ E  +    ++ ++  NR RIK+NN
Subjt:  NILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNAESLSYGDLKRFVKLDNRARIKENN

Q9CPW3 39S ribosomal protein L54, mitochondrial

3.0e-05

37.5

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Query:  KGSKGGAAADAPK-ASILSKEVKSTT-VVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNAESLSYGDLKRFVKLDNRARIKENNSI
        KG KGG AA+A K   + +   + TT  +G NI KEG D  + ADSEYP WL+  ++  PP  +L     ES  Y  L R   +    R+ +N  +
Subjt:  KGSKGGAAADAPK-ASILSKEVKSTT-VVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNAESLSYGDLKRFVKLDNRARIKENNSI

Arabidopsis top hits

e value

%identity

Alignment

AT3G01740.1 Mitochondrial ribosomal protein L37

2.0e-41

71.43

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Query:  SSKDLIQLTSVRTF-AAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNAESLSYGDLKR
        SSKD+++    RTF AA  K+KKG KGG A+DAPK S L+KE+KSTTVVG N LK+G+DPKI+ DS+YPDWLWHLLDK P LSELRRKN E+L Y DLKR
Subjt:  SSKDLIQLTSVRTF-AAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNAESLSYGDLKR

Query:  FVKLDNRARIKENNSIKAK
        FVKLD R +IKENNSIKAK
Subjt:  FVKLDNRARIKENNSIKAK

AT5G14290.1 Mitochondrial ribosomal protein L37

1.2e-36

63.57

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Query:  IRLFRRNIIVSSKDLIQLTSVRTFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNA
        IR+F  + I  SKD+++    RTFA A GK+KK  +G    DAPKAS LSKE+KS+ VV  N LK+G DPKI+ +S++PD+LWHLLDK P LSELRRKN 
Subjt:  IRLFRRNIIVSSKDLIQLTSVRTFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNA

Query:  ESLSYGDLKRFVKLDNRARIKENNSIKAK
        E+LS+ DLKRFVKLD RARIKEN+SIKAK
Subjt:  ESLSYGDLKRFVKLDNRARIKENNSIKAK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGAGCCAAATTAGATTGTTTAGAAGGAACATTATTGTCAGTAGCAAAGATCTAATACAACTGACATCGGTACGAACATTCGCTGCCGGAGGCAAATCAAAGAAGGG
ATCTAAAGGGGGTGCAGCTGCTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACTACTGTAGTTGGTGGCAATATTCTCAAGGAAGGTGCAGATCCAA
AAATTATGGCAGACTCAGAGTACCCTGATTGGCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCCGAAAGTCTTTCCTACGGAGAT
CTCAAACGCTTTGTTAAATTGGATAATCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAA

mRNA sequence

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GTACACCATTTATTTCCTAAAACTAATCGAAAATAAAATAGCCCACGAGCCCTCTCCATCTCGCTCTTTCTCGCAGAACCGCACCTCCCACCGCAGTCCGCCGTATTATT
CGACCGCCGTCCAGCCAGTCGCTCCGCTGATCTCTCTTCCATTGCCGAAGAAGAAAAAAATGGGGAGCCAAATTAGATTGTTTAGAAGGAACATTATTGTCAGTAGCAAA
GATCTAATACAACTGACATCGGTACGAACATTCGCTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATGCTCCTAAAGCATCAATTCTAAGTAA
AGAGGTGAAGTCTACTACTGTAGTTGGTGGCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAGTACCCTGATTGGCTGTGGCATTTGCTTGATA
AGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCCGAAAGTCTTTCCTACGGAGATCTCAAACGCTTTGTTAAATTGGATAATCGAGCAAGGATCAAGGAAAACAAT
TCTATTAAGGCCAAGTAACAATATAGTAGAGGCAGACTTTCTTTTTGTTTCTTTTGTGAATGTAATGCAACTCTTTCCCAAACTCTGTAATGACTATCAATAAGTCCTGA
CTTGCATTCTCTCTCTTTTAGTTACTATCAAAGTCCATTTTAATGTCTACTTTCAGATGAAATTCGACCAGTTCGGCTTTAATTTGAAAGCCAATCTTGTTATAATTTGC
TTTCACAGTAAAAATGAGAGTTGGAGAGTCAAGTCAATCTTGTTATATTTCTTCTGAATGCAAGTGAGAGGGAAGTAGGTAACGCAAGTGAGAGGAAATTCTGATGGAGG
CTAAAAATTCCCACTCCAACCTTTGGTTTCC

Protein sequence

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MGSQIRLFRRNIIVSSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGGNILKEGADPKIMADSEYPDWLWHLLDKHPPLSELRRKNAESLSYGD
LKRFVKLDNRARIKENNSIKAK

PI0002580 (gene) of Melon (PI 482460) v1 genome