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PI0002634 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002634
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description60S ribosomal protein L28-2 isoform B
Genome locationchr01:28884109..28884360
RNA-Seq ExpressionPI0002634
SyntenyPI0002634
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059447.1 hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa]1.0e-3293.98Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR
        MSVKKSLSLTKAEEAKRL RHEAARKRR+SFDLCFSYPELPMERG SLKEM+SEKLKTGIKKWAKAVVAYARTVSDRFGS RR
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR

KAG6575488.1 hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia]8.3e-2784.15Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR
        MSVKKS SLTKAEEAKR  RH+AARKRR+SFDLCFS PELPME G SLKEMDSEKLK  I+KWAKAVVAYARTVS+RFGS R
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR

KAG6593505.1 hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2985.54Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR
        MSVKKSLSLTKAEEAKR  RH+AARKRR+SFDLCFS P+L MERG SLKEMDSEKLK+GI+KWAK+VVAYAR VSDRFGSWRR
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR

KGN45542.1 hypothetical protein Csa_016865 [Cucumis sativus]1.7e-3292.77Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR
        MSVKKSLSLTKAEEAKRL RHEAARKRR+SFDLCFSYPE+PMERG SLKEM+SEKLKTGIKKWAKAVVAYARTVSDRFGS RR
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR

PON96105.1 hypothetical protein TorRG33x02_080350 [Trema orientale]4.8e-1462.2Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR
        MSVKK+LSL + E A   K H+ + +R K +  CFS+ ELPMERG +LKEMDS KLK  IK+WAKAVVAYAR VS RFG  R
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR

TrEMBL top hitse value%identityAlignment
A0A0A0KB03 Uncharacterized protein8.4e-3392.77Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR
        MSVKKSLSLTKAEEAKRL RHEAARKRR+SFDLCFSYPE+PMERG SLKEM+SEKLKTGIKKWAKAVVAYARTVSDRFGS RR
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR

A0A2P5FE88 Uncharacterized protein2.3e-1462.2Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR
        MSVKK+LSL + E A   K H+ + +R K +  CFS+ ELPMERG +LKEMDS KLK  IK+WAKAVVAYAR VS RFG  R
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR

A0A498IZM5 Uncharacterized protein1.1e-1362.03Show/hide
Query:  KKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR
        +K+LSL   E  K      AA++ R  FD CFS+ E+  E G SLKEMDSEKLK+GIK+WAKAVVAYAR VSDRFGS R
Subjt:  KKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR

A0A5A7UXU0 Uncharacterized protein4.9e-3393.98Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR
        MSVKKSLSLTKAEEAKRL RHEAARKRR+SFDLCFSYPELPMERG SLKEM+SEKLKTGIKKWAKAVVAYARTVSDRFGS RR
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR

A0A7J6HUR0 Uncharacterized protein1.1e-1359.76Show/hide
Query:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR
        MSVKK+LSL + E A   K  E + KR K +  CFS+ E+ ME G +LKEMDS KLK  IK+WAKAVVAYAR VS RFG  R
Subjt:  MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCAAAAGGCATGAAGCTGCCAGAAAGCGCAGGAAATCTTTTGATCTCTGTTTTTCGTA
CCCAGAGCTACCAATGGAACGTGGAAATTCTTTGAAAGAGATGGATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCCGTGGTGGCTTATGCCCGCACAG
TAAGCGATCGCTTTGGAAGCTGGCGTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCAAAAGGCATGAAGCTGCCAGAAAGCGCAGGAAATCTTTTGATCTCTGTTTTTCGTA
CCCAGAGCTACCAATGGAACGTGGAAATTCTTTGAAAGAGATGGATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCCGTGGTGGCTTATGCCCGCACAG
TAAGCGATCGCTTTGGAAGCTGGCGTCGCTAA
Protein sequenceShow/hide protein sequence
MSVKKSLSLTKAEEAKRLKRHEAARKRRKSFDLCFSYPELPMERGNSLKEMDSEKLKTGIKKWAKAVVAYARTVSDRFGSWRR