; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002671 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002671
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionserine/arginine-rich splicing factor SR34A
Genome locationchr09:48508..54811
RNA-Seq ExpressionPI0002671
SyntenyPI0002671
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011654574.2 serine/arginine-rich splicing factor SR34A [Cucumis sativus]5.3e-12990.16Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  G-------------------GGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL
        G                        GGGG GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL
Subjt:  G-------------------GGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKL

Query:  DDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQA
        DDTEFRNPWARAYIRVKKYDGSPT  RSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSP+KSSRPRSKSRSGSP QA
Subjt:  DDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQA

Query:  REGSE
        REGSE
Subjt:  REGSE

XP_022137780.1 serine/arginine-rich splicing factor SR34A [Momordica charantia]2.4e-12993.03Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-GGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY GGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-GGGG

Query:  GGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK
        GGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKK
Subjt:  GGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK

Query:  YDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE
        YDGSPTRSRSRSRSRSRSRSRS+SRSRS          ARRNRSKS E RSVSRSVSRSRSPSPVKSSRPRSKSRSGSP + REGSE
Subjt:  YDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE

XP_022974340.1 serine/arginine-rich splicing factor SR34A-like isoform X1 [Cucurbita maxima]1.8e-12188.36Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI
        GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YI
Subjt:  GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI

Query:  RVKKYDGSPTRSRSRSRSRS---------------------RSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS
        RVKKYDGSPTRSRSRSRSRS                     RSRSR+RS+SRSRSRSRSRSR+AR NRSKSAE RSVSRSVSRSRSPSPVKS
Subjt:  RVKKYDGSPTRSRSRSRSRS---------------------RSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS

XP_023533518.1 serine/arginine-rich splicing factor SR34A-like isoform X2 [Cucurbita pepo subsp. pepo]1.8e-12188.77Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSSSD RS+Y     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
         GG GGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKKY
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGS
        +GSPTR RSR+RSRSRSRSRSRSRSRSRS        ARRNRSKSAE +SVSRSVSRSRS SPVKSSR RSKSRSGSP +AREGS
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGS

XP_038907230.1 serine/arginine-rich splicing factor SR34A [Benincasa hispida]7.1e-13496.15Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        GGGG GGGGG GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA+RKLDDTEFRNPWARAYIRVKKY
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE
        DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSR ARRNRSKSAE RSVSRSVSRSRSPSPVKSSRPRSKSRSGSP QAREGSE
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE

TrEMBL top hitse value%identityAlignment
A0A0A0KLR9 Uncharacterized protein7.7e-13494.83Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY    G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY----G

Query:  GGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
        GGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
Subjt:  GGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE
        VKKYDGSPT        RSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSP+KSSRPRSKSRSGSP QAREGSE
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE

A0A6J1C7M8 serine/arginine-rich splicing factor SR34A1.1e-12993.03Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-GGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY GGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-GGGG

Query:  GGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK
        GGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIRVKK
Subjt:  GGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK

Query:  YDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE
        YDGSPTRSRSRSRSRSRSRSRS+SRSRS          ARRNRSKS E RSVSRSVSRSRSPSPVKSSRPRSKSRSGSP + REGSE
Subjt:  YDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE

A0A6J1E2U1 serine/arginine-rich splicing factor SR34A-like4.4e-12186.82Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY  GGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YIRVKKY
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSR------------------------------SRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS
        DGSPTRSRSRSRSRS+SRSRSRSRSRSRSR                              SRSRSR+AR NRSKSAE RSVSRSVSRSRSPSPVKS
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSR------------------------------SRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS

A0A6J1IB34 serine/arginine-rich splicing factor SR34A-like isoform X18.8e-12288.36Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY-----

Query:  GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI
        GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YI
Subjt:  GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI

Query:  RVKKYDGSPTRSRSRSRSRS---------------------RSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS
        RVKKYDGSPTRSRSRSRSRS                     RSRSR+RS+SRSRSRSRSRSR+AR NRSKSAE RSVSRSVSRSRSPSPVKS
Subjt:  RVKKYDGSPTRSRSRSRSRS---------------------RSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS

A0A6J1IB38 serine/arginine-rich splicing factor SR34A-like isoform X29.7e-12188.15Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YIRVKKY
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRS---------------------RSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS
        DGSPTRSRSRSRSRS                     RSRSR+RS+SRSRSRSRSRSR+AR NRSKSAE RSVSRSVSRSRSPSPVKS
Subjt:  DGSPTRSRSRSRSRS---------------------RSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS

SwissProt top hitse value%identityAlignment
A2RVS6 Serine/arginine-rich splicing factor SR34A5.0e-10675.17Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  Y  GGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        G G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSR----SRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-------------SRPRSKSRSGSPHQARE
        + S +RSRS SRSRSRSRSRSRSR R    SRSRS SRS++ R++ SKS  RRS+SRS+S+SRSPSP K              SR RS+S S SP + RE
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSR----SRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-------------SRPRSKSRSGSPHQARE

Query:  GS
        GS
Subjt:  GS

F4JHI7 Serine/arginine-rich splicing factor SR34B1.1e-7365.11Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRTIYVGNLP DI+E E+EDLF KYG ++ I+LKIPPRPP Y FVEFE+ RDA+DAI  RDGY+FDG  LRVELAHGGR  SS D R SY    G
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
         G GG GGG GGG   G S+RSEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD  GT GIVDYT+Y+DMKYA   LDDTEFRN ++  Y+RV++Y
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSP
        D     SR  SRS SR RS S+SRSR RS SRSRSR+  R++S+S + +S+ RS ++S S SP   SR RSKSRS SP
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSP

O22315 Serine/arginine-rich-splicing factor SR342.2e-7763.61Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF++ RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        GGG G G GG      G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++Y
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRS---RTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE
        D      SP+R RS S+SRSRSR RS SRSRSRSRSRSRS   +++RR+ +KS  R    R  S+SRSPSP    R RS+SRS  P   +EGS+
Subjt:  DG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRS---RTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE

Q6DII2 Serine/arginine-rich splicing factor 16.2e-5660.71Show/hide
Query:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGGGGGG
        IYVGNLP DI+  +IED+FYKYG I DI+LK     P + FVEFE+ RDAEDA+  RDGY++DG RLRVE    GRG          GGGGGGGGGGGGG
Subjt:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGGGGGG

Query:  GGGGG------GRFG-VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVKKY
        GGGGG      GR+G  S+RSEYRV+V GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+FR +    AYIRV K 
Subjt:  GGGGG------GRFG-VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVKKY

Query:  DG--SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRS
        DG  SP+  RSRSRSRSRSRSRSRS SRSRS S  RSR + R   + +  RS
Subjt:  DG--SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTARRNRSKSAERRS

Q9XFR5 Serine/arginine-rich splicing factor SR304.6e-6760.28Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGR--GPSSSDRRSSYGGG
        MSSR++RTIYVGNLP DI++ E+EDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+DAI  RDGY+FDGCRLRVE+AHGGR   PS     SSY   
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGR--GPSSSDRRSSYGGG

Query:  GGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVK
                            S+RS+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV  D +G  G+VDY+NYDDMKYAIRKLD TEFRN ++ AYIRV+
Subjt:  GGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVK

Query:  KYDGSPTRSRSRSRSRSRS-RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-SRPRSKSRSGSP
        +Y+   +RS SRS   S+S RSRSRSR  S S S S+SR+    RS S   R +SRS S   S S  +S S+ RS+SRS SP
Subjt:  KYDGSPTRSRSRSRSRSRS-RSRSRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-SRPRSKSRSGSP

Arabidopsis top hitse value%identityAlignment
AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-7863.61Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF++ RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        GGG G G GG      G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++Y
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRS---RTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE
        D      SP+R RS S+SRSRSR RS SRSRSRSRSRSRS   +++RR+ +KS  R    R  S+SRSPSP    R RS+SRS  P   +EGS+
Subjt:  DG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRS---RTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE

AT1G02840.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-7863.61Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF++ RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        GGG G G GG      G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV++Y
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRS---RTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE
        D      SP+R RS S+SRSRSR RS SRSRSRSRSRSRS   +++RR+ +KS  R    R  S+SRSPSP    R RS+SRS  P   +EGS+
Subjt:  DG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSRS---RTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE

AT3G49430.1 SER/ARG-rich protein 34A3.5e-10775.17Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  Y  GGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        G G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSR----SRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-------------SRPRSKSRSGSPHQARE
        + S +RSRS SRSRSRSRSRSRSR R    SRSRS SRS++ R++ SKS  RRS+SRS+S+SRSPSP K              SR RS+S S SP + RE
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSR----SRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-------------SRPRSKSRSGSPHQARE

Query:  GS
        GS
Subjt:  GS

AT3G49430.2 SER/ARG-rich protein 34A5.1e-10679.12Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  Y  GGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        G G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSR----SRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRP
        + S +RSRS SRSRSRSRSRSRSR R    SRSRS SRS++ R++ SKS  RRS+SRS+S+SRSPSP K   P
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSR----SRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRP

AT3G49430.3 SER/ARG-rich protein 34A3.5e-10775.17Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  Y  GGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY
        G G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRVKKY
Subjt:  GGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSR----SRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-------------SRPRSKSRSGSPHQARE
        + S +RSRS SRSRSRSRSRSRSR R    SRSRS SRS++ R++ SKS  RRS+SRS+S+SRSPSP K              SR RS+S S SP + RE
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSR----SRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKS-------------SRPRSKSRSGSPHQARE

Query:  GS
        GS
Subjt:  GS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCCTCAGACATAAAAGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGA
ATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAATGTTAGGGATGCAGAAGATGCAATCAGAGCTCGTGATGGATATAATTTTGATGGTTGCC
GTCTAAGGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGG
GGGGGGGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTGAAGGATCATATGCGCAAGGC
GGGGGATGTGTGTTTTGCTGAAGTTTCACGTGATAGCGAAGGGACGTTTGGGATCGTTGATTATACTAACTACGACGACATGAAATATGCTATACGAAAACTTGATGATA
CTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGCAGGAGCAGGAGCAGAAGCCGTAGTAGAAGCAGAAGCCGA
AGCCGAAGCCGAAGCCGAAGCCGTAGCCGTAGCCGAAGCCGAAGCCGGACTGCTAGACGAAATAGGAGCAAATCAGCAGAACGACGATCTGTTTCTAGATCAGTTTCAAG
ATCAAGATCTCCATCTCCTGTTAAATCTTCAAGGCCACGGTCAAAATCAAGATCTGGATCACCACATCAGGCACGAGAAGGAAGCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCCTCAGACATAAAAGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGA
ATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAATGTTAGGGATGCAGAAGATGCAATCAGAGCTCGTGATGGATATAATTTTGATGGTTGCC
GTCTAAGGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGG
GGGGGGGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTGAAGGATCATATGCGCAAGGC
GGGGGATGTGTGTTTTGCTGAAGTTTCACGTGATAGCGAAGGGACGTTTGGGATCGTTGATTATACTAACTACGACGACATGAAATATGCTATACGAAAACTTGATGATA
CTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGCAGGAGCAGGAGCAGAAGCCGTAGTAGAAGCAGAAGCCGA
AGCCGAAGCCGAAGCCGAAGCCGTAGCCGTAGCCGAAGCCGAAGCCGGACTGCTAGACGAAATAGGAGCAAATCAGCAGAACGACGATCTGTTTCTAGATCAGTTTCAAG
ATCAAGATCTCCATCTCCTGTTAAATCTTCAAGGCCACGGTCAAAATCAAGATCTGGATCACCACATCAGGCACGAGAAGGAAGCGAGTGATGCAAAGCTATGATTATAT
GCATGGTTGTTATAATATTCAGGATGTGACATTGCCTTGGAATTCATTTTAGTTTAGGACCTATGCAGTGCAGACTGGTTATATGAGGGGTTGAGTTAGATGGAAAATGG
CATGAGTTGTATGGATATTCTTTTGAATCCTTCCTACATCACTTTGTTTTGAGACATTTTTAGGTATCTGCATTCTCAAGTTACTTGCACACTGGTTTCCCTGACTGATA
ACTATTCAGATTTTGTTTGAAAGTTGAAAATGAAATTGTTATTAAATGGGATTTTAGACCTTGTAATTAGAAATTTTAGACCTTGGATATTCTTCTCTTTTTGATTCTTT
TCTCGTTCCCTGCTGTTGACCACCATGAGGGACACAGAGGTTGAAGAGAC
Protein sequenceShow/hide protein sequence
MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGGGGGGGG
GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSR
SRSRSRSRSRSRSRSRTARRNRSKSAERRSVSRSVSRSRSPSPVKSSRPRSKSRSGSPHQAREGSE