; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002692 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002692
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr09:8900763..8901554
RNA-Seq ExpressionPI0002692
SyntenyPI0002692
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-5649.57Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI
        M +SSR PKH WTKEE+  LVECLVELV+ GGWRSDNGTFRPGY + L +M+A ++PG NI A TID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI

Query:  IAEKDLFDSW----------------------------------------VKVPPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGL
        +AEK++FD W                                           PPG++        D + P MYS GL+MSPDD+M  R+ R+SE R   
Subjt:  IAEKDLFDSW----------------------------------------VKVPPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGL

Query:  SGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE
        SGSKRK+ G A ++ +I+R+ +EY N+QL  IAE
Subjt:  SGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE

KAA0048377.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-5549.57Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI
        M +SSR PKH WTKEE+  LVECLVELV+ GGWRSDNGTFRPGY + L +M+A ++PG NI A TID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI

Query:  IAEKDLFDSW----------------------------------------VKVPPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGL
        +AEK++FD W                                           PPG++        D + P MYS GL+MSPDD+M  R+ R+SE R   
Subjt:  IAEKDLFDSW----------------------------------------VKVPPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGL

Query:  SGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE
        SGSKRK+ G A ++ +I+R+ +EY N+QL  IAE
Subjt:  SGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE

KAA0060663.1 retrotransposon protein [Cucumis melo var. makuwa]5.3e-5655.45Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI
        M +SSR PKH WTKEE+      LVELV+ GGWRSDNGTFRPGY + L +M+A ++PG NI A TID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI

Query:  IAEKDLFDSWVKV--------PPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAI
        +AEK++FD W +         P G++ FP     D + P MYS GL+MSPDD+M  R+ R+SE R   +GSKRK+ G A ++ +I+R+ +EY N+QL  I
Subjt:  IAEKDLFDSWVKV--------PPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAI

Query:  AE
        AE
Subjt:  AE

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-5751.27Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI
        M +SSR PKH WTKEE+  LVECLVELV+ GGWRSDNGTFRPGY + L +M+A ++PG NI A TID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI

Query:  IAEKDLFDSWVKVPPGFEG-----FPHYDG-------------------------------------NDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARA
        + EK+LFD WVK  P  +G     F HYD                                       D + P MYS GL+MSPDD+M  R+ R+SE R 
Subjt:  IAEKDLFDSWVKVPPGFEG-----FPHYDG-------------------------------------NDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARA

Query:  GLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE
          SGSKRK+ G A ++ +I+R+ +EY N+QL  IAE
Subjt:  GLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.3e-5750Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNI-TAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKC
        M + SR PKH WTKEE+   VECLVELVS GGWRSDNGTF+PGY + LQ+M+AE++PG NI  + TIDC +K++K+ + AI+EMRGP+CSGFGWN+E +C
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNI-TAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKC

Query:  IIAEKDLFDSWVKVPPGFEG-----FPHY--------------------------------------DGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEA
        IIAE+DLFDSW+K  P  +G     FP+Y                                      D +D +IPTMYSQG+ MSPD++   R+ + SE 
Subjt:  IIAEKDLFDSWVKVPPGFEG-----FPHY--------------------------------------DGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEA

Query:  RAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE
        R   S SKRK+G +  E  E+IRSVME+ N+QLKAIA+
Subjt:  RAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859536.1e-5850Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNI-TAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKC
        M + SR PKH WTKEE+   VECLVELVS GGWRSDNGTF+PGY + LQ+M+AE++PG NI  + TIDC +K++K+ + AI+EMRGP+CSGFGWN+E +C
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNI-TAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKC

Query:  IIAEKDLFDSWVKVPPGFEG-----FPHY--------------------------------------DGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEA
        IIAE+DLFDSW+K  P  +G     FP+Y                                      D +D +IPTMYSQG+ MSPD++   R+ + SE 
Subjt:  IIAEKDLFDSWVKVPPGFEG-----FPHY--------------------------------------DGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEA

Query:  RAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE
        R   S SKRK+G +  E  E+IRSVME+ N+QLKAIA+
Subjt:  RAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE

A0A5A7U0H7 Retrotransposon protein6.1e-5850Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNI-TAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKC
        M + SR PKH WTKEE+   VECLVELVS GGWRSDNGTF+PGY + LQ+M+AE++PG NI  + TIDC +K++K+ + AI+EMRGP+CSGFGWN+E +C
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNI-TAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKC

Query:  IIAEKDLFDSWVKVPPGFEG-----FPHY--------------------------------------DGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEA
        IIAE+DLFDSW+K  P  +G     FP+Y                                      D +D +IPTMYSQG+ MSPD++   R+ + SE 
Subjt:  IIAEKDLFDSWVKVPPGFEG-----FPHY--------------------------------------DGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEA

Query:  RAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE
        R   S SKRK+G +  E  E+IRSVME+ N+QLKAIA+
Subjt:  RAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE

A0A5A7UXH8 Retrotransposon protein2.5e-5655.45Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI
        M +SSR PKH WTKEE+      LVELV+ GGWRSDNGTFRPGY + L +M+A ++PG NI A TID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI

Query:  IAEKDLFDSWVKV--------PPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAI
        +AEK++FD W +         P G++ FP     D + P MYS GL+MSPDD+M  R+ R+SE R   +GSKRK+ G A ++ +I+R+ +EY N+QL  I
Subjt:  IAEKDLFDSWVKV--------PPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAI

Query:  AE
        AE
Subjt:  AE

A0A5D3C1M0 Retrotransposon protein6.1e-5851.27Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI
        M +SSR PKH WTKEE+  LVECLVELV+ GGWRSDNGTFRPGY + L +M+A ++PG NI A TID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI

Query:  IAEKDLFDSWVKVPPGFEG-----FPHYDG-------------------------------------NDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARA
        + EK+LFD WVK  P  +G     F HYD                                       D + P MYS GL+MSPDD+M  R+ R+SE R 
Subjt:  IAEKDLFDSWVKVPPGFEG-----FPHYDG-------------------------------------NDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARA

Query:  GLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE
          SGSKRK+ G A ++ +I+R+ +EY N+QL  IAE
Subjt:  GLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE

A0A5D3DPR5 Retrotransposon protein4.3e-5649.57Show/hide
Query:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI
        M +SSR PKH WTKEE+  LVECLVELV+ GGWRSDNGTFRPGY + L +M+A ++PG NI A TID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCI

Query:  IAEKDLFDSW----------------------------------------VKVPPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGL
        +AEK++FD W                                           PPG++        D + P MYS GL+MSPDD+M  R+ R+SE R   
Subjt:  IAEKDLFDSW----------------------------------------VKVPPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGL

Query:  SGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE
        SGSKRK+ G A ++ +I+R+ +EY N+QL  IAE
Subjt:  SGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTTCTTCAAGGACCCCGAAGCACCACTGGACAAAAGAGGAGGATGTCGTCCTCGTTGAATGTCTAGTGGAGTTGGTATCTTTTGGCGGGTGGAGGTCGGATAA
TGGGACGTTTAGACCCGGATACCATAGTCATCTACAGAAAATGATTGCCGAAAGGATGCCGGGACATAACATAACGGCTATGACAATAGATTGTCGAATCAAGACAATGA
AAAGAGCATTTCAAGCGATATCTGAAATGAGGGGCCCGACATGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGG
GTGAAGGTGCCTCCAGGCTTCGAAGGATTTCCCCACTATGATGGGAACGATATGGAGATCCCAACGATGTACAGTCAGGGCCTGGACATGTCGCCTGACGACATAATGAC
TCCACGATCGGTTCGTATGTCTGAGGCTAGGGCTGGTTTGAGCGGGTCGAAGAGGAAACAGGGAGGGCAGGCATTGGAGGCGGCAGAAATTATTCGCAGTGTCATGGAAT
ATGCTAATGACCAACTTAAAGCCATTGCAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTTCTTCAAGGACCCCGAAGCACCACTGGACAAAAGAGGAGGATGTCGTCCTCGTTGAATGTCTAGTGGAGTTGGTATCTTTTGGCGGGTGGAGGTCGGATAA
TGGGACGTTTAGACCCGGATACCATAGTCATCTACAGAAAATGATTGCCGAAAGGATGCCGGGACATAACATAACGGCTATGACAATAGATTGTCGAATCAAGACAATGA
AAAGAGCATTTCAAGCGATATCTGAAATGAGGGGCCCGACATGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGG
GTGAAGGTGCCTCCAGGCTTCGAAGGATTTCCCCACTATGATGGGAACGATATGGAGATCCCAACGATGTACAGTCAGGGCCTGGACATGTCGCCTGACGACATAATGAC
TCCACGATCGGTTCGTATGTCTGAGGCTAGGGCTGGTTTGAGCGGGTCGAAGAGGAAACAGGGAGGGCAGGCATTGGAGGCGGCAGAAATTATTCGCAGTGTCATGGAAT
ATGCTAATGACCAACTTAAAGCCATTGCAGAATGA
Protein sequenceShow/hide protein sequence
METSSRTPKHHWTKEEDVVLVECLVELVSFGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITAMTIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSW
VKVPPGFEGFPHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGLSGSKRKQGGQALEAAEIIRSVMEYANDQLKAIAE