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PI0002695 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002695
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr01:7964112..7964768
RNA-Seq ExpressionPI0002695
SyntenyPI0002695
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.7e-2641.18Show/hide
Query:  MSFSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILA
        + F  +AINALY L N+    G +  ++P  R  ++ LE I W G  W+  PT KYQL+P+ L TE SVWL FIKK   PTRHDSTI++E  MLLY    
Subjt:  MSFSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILA

Query:  KKHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHK
            N  E+    +++W++ P GA PF    + L +KA P L   Q + +  G+C    L+  IT H +K
Subjt:  KKHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]1.4e-3344.39Show/hide
Query:  FSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK
        F+ E IN LYDLPND+   PGQ  +    +  A++++++I W  A    TPT + QL+PHQLT EA+VWLFFIKKK FPT HDSTI  E A++LYCI AK
Subjt:  FSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK

Query:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAV-PFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKT------LGDTHEGMPQAERKRK
        K  NLG ++  + LSWMR PK A PFP+T++ LCLK +      I  I + GG CN      + T      ++R+A T      LG  ++ +    RK++
Subjt:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAV-PFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKT------LGDTHEGMPQAERKRK

Query:  SPVVA
           VA
Subjt:  SPVVA

KAA0062748.1 hypothetical protein E6C27_scaffold382G00810 [Cucumis melo var. makuwa]8.1e-2944.44Show/hide
Query:  SFSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILA
        SF+ +AIN LY+LP+D +  P Q +   PI+ + + +L+VI WLGA WE  PTG+ QLYPHQLT EA+VWLFFIKKK FPTRHDST  L  ++    I  
Subjt:  SFSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILA

Query:  KKHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHKE
         ++  LG   A        AP+      +TI  LCLK +  L+ +   ++ GG CN   LN +I  H ++E
Subjt:  KKHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHKE

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-3352Show/hide
Query:  FSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK
        F+ E IN LY+ PND E  GQ  V    K +A+E L+V+AW G   EV P   +YQLYPH LTT+A+VW+FF K K FPT +DSTI+++  ++LYCI+ K
Subjt:  FSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK

Query:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIP
        K +NL E+I  +IL+WM  PK AMPFPS +E LCLK +P L      +IP
Subjt:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.4e-3344.39Show/hide
Query:  FSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK
        F+ E IN LYDLPND+   PGQ  +    +  A++++++I W  A    TPT + QL+PHQLT EA+VWLFFIKKK FPT HDSTI  E A++LYCI AK
Subjt:  FSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK

Query:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAV-PFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKT------LGDTHEGMPQAERKRK
        K  NLG ++  + LSWMR PK A PFP+T++ LCLK +      I  I + GG CN      + T      ++R+A T      LG  ++ +    RK++
Subjt:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAV-PFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKT------LGDTHEGMPQAERKRK

Query:  SPVVA
           VA
Subjt:  SPVVA

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase6.9e-3444.39Show/hide
Query:  FSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK
        F+ E IN LYDLPND+   PGQ  +    +  A++++++I W  A    TPT + QL+PHQLT EA+VWLFFIKKK FPT HDSTI  E A++LYCI AK
Subjt:  FSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK

Query:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAV-PFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKT------LGDTHEGMPQAERKRK
        K  NLG ++  + LSWMR PK A PFP+T++ LCLK +      I  I + GG CN      + T      ++R+A T      LG  ++ +    RK++
Subjt:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAV-PFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKT------LGDTHEGMPQAERKRK

Query:  SPVVA
           VA
Subjt:  SPVVA

A0A5A7V6M5 Gag/pol protein5.3e-3452Show/hide
Query:  FSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK
        F+ E IN LY+ PND E  GQ  V    K +A+E L+V+AW G   EV P   +YQLYPH LTT+A+VW+FF K K FPT +DSTI+++  ++LYCI+ K
Subjt:  FSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK

Query:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIP
        K +NL E+I  +IL+WM  PK AMPFPS +E LCLK +P L      +IP
Subjt:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIP

A0A5D3CBF2 Uncharacterized protein3.9e-2944.44Show/hide
Query:  SFSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILA
        SF+ +AIN LY+LP+D +  P Q +   PI+ + + +L+VI WLGA WE  PTG+ QLYPHQLT EA+VWLFFIKKK FPTRHDST  L  ++    I  
Subjt:  SFSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILA

Query:  KKHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHKE
         ++  LG   A        AP+      +TI  LCLK +  L+ +   ++ GG CN   LN +I  H ++E
Subjt:  KKHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHKE

A0A5D3CVL7 Uncharacterized protein6.9e-3444.39Show/hide
Query:  FSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK
        F+ E IN LYDLPND+   PGQ  +    +  A++++++I W  A    TPT + QL+PHQLT EA+VWLFFIKKK FPT HDSTI  E A++LYCI AK
Subjt:  FSAEAINALYDLPNDVET-PGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAK

Query:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAV-PFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKT------LGDTHEGMPQAERKRK
        K  NLG ++  + LSWMR PK A PFP+T++ LCLK +      I  I + GG CN      + T      ++R+A T      LG  ++ +    RK++
Subjt:  KHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAV-PFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKT------LGDTHEGMPQAERKRK

Query:  SPVVA
           VA
Subjt:  SPVVA

A0A5D3CW17 Uncharacterized protein8.1e-2741.18Show/hide
Query:  MSFSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILA
        + F  +AINALY L N+    G +  ++P  R  ++ LE I W G  W+  PT KYQL+P+ L TE SVWL FIKK   PTRHDSTI++E  MLLY    
Subjt:  MSFSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILA

Query:  KKHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHK
            N  E+    +++W++ P GA PF    + L +KA P L   Q + +  G+C    L+  IT H +K
Subjt:  KKHVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCAGCGCGGAGGCCATCAACGCGTTGTATGATTTGCCCAATGACGTTGAAACTCCAGGGCAAATATACGTAGACAGTCCTATAAAGAGGATGGCCCGTGAAGT
GCTGGAAGTCATCGCATGGCTTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAGCTAACCACTGAAGCAAGCGTGTGGTTGTTCTTTA
TCAAGAAGAAAACCTTCCCAACGCGCCATGATAGCACCATCAATTTAGAGTCAGCGATGCTACTCTATTGTATCCTGGCGAAGAAGCATGTTAACCTTGGCGAACTTATA
GCCACATCCATTCTGTCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCCTTAAAGCTGTGCCATTCTTATCCGCCATCCAAAC
CATCTCAATACCAGGCGGGCTGTGTAATCAAATGGCCTTGAACCACATGATTACTTTCCATGGACACAAGGAGATGGAAAGGCGGGCAAAGACATTAGGCGACACACATG
AAGGAATGCCCCAAGCAGAAAGAAAAAGGAAATCCCCAGTCGTCGCATCAACCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAGCAGCCTCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCAGCGCGGAGGCCATCAACGCGTTGTATGATTTGCCCAATGACGTTGAAACTCCAGGGCAAATATACGTAGACAGTCCTATAAAGAGGATGGCCCGTGAAGT
GCTGGAAGTCATCGCATGGCTTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAGCTAACCACTGAAGCAAGCGTGTGGTTGTTCTTTA
TCAAGAAGAAAACCTTCCCAACGCGCCATGATAGCACCATCAATTTAGAGTCAGCGATGCTACTCTATTGTATCCTGGCGAAGAAGCATGTTAACCTTGGCGAACTTATA
GCCACATCCATTCTGTCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCCTTAAAGCTGTGCCATTCTTATCCGCCATCCAAAC
CATCTCAATACCAGGCGGGCTGTGTAATCAAATGGCCTTGAACCACATGATTACTTTCCATGGACACAAGGAGATGGAAAGGCGGGCAAAGACATTAGGCGACACACATG
AAGGAATGCCCCAAGCAGAAAGAAAAAGGAAATCCCCAGTCGTCGCATCAACCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAGCAGCCTCCACTGA
Protein sequenceShow/hide protein sequence
MSFSAEAINALYDLPNDVETPGQIYVDSPIKRMAREVLEVIAWLGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKTFPTRHDSTINLESAMLLYCILAKKHVNLGELI
ATSILSWMRAPKGAMPFPSTIEALCLKAVPFLSAIQTISIPGGLCNQMALNHMITFHGHKEMERRAKTLGDTHEGMPQAERKRKSPVVASTPHLKPKKQRFLRRSSLH