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PI0002713 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002713
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:16470697..16471287
RNA-Seq ExpressionPI0002713
SyntenyPI0002713
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050146.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.6e-3655.5Show/hide
Query:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTH-GRRRGRR-
        +++YTSRIKA +DKL A SVSLEDEEILVHTLNGL A FN FRTSIRTR+  ISLEELHTL I+EETT+ K + ++  P A+AAFHP   H  R RGRR 
Subjt:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTH-GRRRGRR-

Query:  --NGNPNPNS--NSFSR----ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSN----FGPHTPSPFSNSNQRGIIGSAS--GSSFGPDTNIGPIGRIF
           GNPN NS  NS +R    ASG  G+G+NN         NF      FRPN N    F P +     + NQRGIIGS+   G SF P+TN G  GRIF
Subjt:  --NGNPNPNS--NSFSR----ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSN----FGPHTPSPFSNSNQRGIIGSAS--GSSFGPDTNIGPIGRIF

KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.1e-3257.58Show/hide
Query:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR-
        ++QYTSRIKA +DKL AASVSLEDEEILVHTLNGLPA FN FRTSIRTRSG ISLEELHTLLI+EET I K + ++  P A+AAFHP   HG R RGRR 
Subjt:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR-

Query:  --NGNPNPNSNSFSR------ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSNFGPHTPSPFS
           GNPN NS+S S       ASG  G+G+NN         NF  +  +    +   P  PSP++
Subjt:  --NGNPNPNSNSFSR------ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSNFGPHTPSPFS

KAA0067173.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-3354.17Show/hide
Query:  KAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR---------
        K  IDKLVAAS+SLEDEEILVHTLNGLP +FN FRTSIRTRSG ISLEELHTLLI+EETT+ K + ++  P A+AAFHPS  H  R RGRR         
Subjt:  KAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR---------

Query:  NGNPNPNSNSFSRASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPN-SNFGPH-TPSPFS--NSNQRGIIGS--ASGSSFGPDTNIGPIGRIF
        N +PN ++   + ASG  G+ +NN         NF      F+PN +N GP   PS F+  + NQRGIIGS  + G SF  + N G  GRIF
Subjt:  NGNPNPNSNSFSRASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPN-SNFGPH-TPSPFS--NSNQRGIIGS--ASGSSFGPDTNIGPIGRIF

TYK06402.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.6e-3655.5Show/hide
Query:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTH-GRRRGRR-
        +++YTSRIKA +DKL A SVSLEDEEILVHTLNGL A FN FRTSIRTR+  ISLEELHTL I+EETT+ K + ++  P A+AAFHP   H  R RGRR 
Subjt:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTH-GRRRGRR-

Query:  --NGNPNPNS--NSFSR----ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSN----FGPHTPSPFSNSNQRGIIGSAS--GSSFGPDTNIGPIGRIF
           GNPN NS  NS +R    ASG  G+G+NN         NF      FRPN N    F P +     + NQRGIIGS+   G SF P+TN G  GRIF
Subjt:  --NGNPNPNS--NSFSR----ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSN----FGPHTPSPFSNSNQRGIIGSAS--GSSFGPDTNIGPIGRIF

XP_016902697.1 PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo]2.4e-4059Show/hide
Query:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR-
        ++QYTSRIKA +DKL AASVSLEDEEILVHTLNGLPA FN FRTSIRTR+G ISLEELHTLLI+EET + K + ++  P A+AAFHP   HG R RGRR 
Subjt:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR-

Query:  --NGNPNPNSNSFSR------ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPN-SNFGPH-TPSPFS--NSNQRGIIGS--ASGSSFGPDTNIGPIGRIF
           GNPN NS+S S       ASG  G+G+NN         NF      FRPN +N GP  +PS F+  + NQRGIIGS  + G SF P+TN G  GRIF
Subjt:  --NGNPNPNSNSFSR------ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPN-SNFGPH-TPSPFS--NSNQRGIIGS--ASGSSFGPDTNIGPIGRIF

TrEMBL top hitse value%identityAlignment
A0A1S4E394 uncharacterized protein LOC1079918251.2e-4059Show/hide
Query:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR-
        ++QYTSRIKA +DKL AASVSLEDEEILVHTLNGLPA FN FRTSIRTR+G ISLEELHTLLI+EET + K + ++  P A+AAFHP   HG R RGRR 
Subjt:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR-

Query:  --NGNPNPNSNSFSR------ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPN-SNFGPH-TPSPFS--NSNQRGIIGS--ASGSSFGPDTNIGPIGRIF
           GNPN NS+S S       ASG  G+G+NN         NF      FRPN +N GP  +PS F+  + NQRGIIGS  + G SF P+TN G  GRIF
Subjt:  --NGNPNPNSNSFSR------ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPN-SNFGPH-TPSPFS--NSNQRGIIGS--ASGSSFGPDTNIGPIGRIF

A0A5A7U7J4 Putative mitochondrial protein1.7e-3655.5Show/hide
Query:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTH-GRRRGRR-
        +++YTSRIKA +DKL A SVSLEDEEILVHTLNGL A FN FRTSIRTR+  ISLEELHTL I+EETT+ K + ++  P A+AAFHP   H  R RGRR 
Subjt:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTH-GRRRGRR-

Query:  --NGNPNPNS--NSFSR----ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSN----FGPHTPSPFSNSNQRGIIGSAS--GSSFGPDTNIGPIGRIF
           GNPN NS  NS +R    ASG  G+G+NN         NF      FRPN N    F P +     + NQRGIIGS+   G SF P+TN G  GRIF
Subjt:  --NGNPNPNS--NSFSR----ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSN----FGPHTPSPFSNSNQRGIIGSAS--GSSFGPDTNIGPIGRIF

A0A5A7UZE5 Putative mitochondrial protein1.5e-3257.58Show/hide
Query:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR-
        ++QYTSRIKA +DKL AASVSLEDEEILVHTLNGLPA FN FRTSIRTRSG ISLEELHTLLI+EET I K + ++  P A+AAFHP   HG R RGRR 
Subjt:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR-

Query:  --NGNPNPNSNSFSR------ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSNFGPHTPSPFS
           GNPN NS+S S       ASG  G+G+NN         NF  +  +    +   P  PSP++
Subjt:  --NGNPNPNSNSFSR------ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSNFGPHTPSPFS

A0A5A7VGG0 Retrotransposon protein8.1e-3454.17Show/hide
Query:  KAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR---------
        K  IDKLVAAS+SLEDEEILVHTLNGLP +FN FRTSIRTRSG ISLEELHTLLI+EETT+ K + ++  P A+AAFHPS  H  R RGRR         
Subjt:  KAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRR-RGRR---------

Query:  NGNPNPNSNSFSRASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPN-SNFGPH-TPSPFS--NSNQRGIIGS--ASGSSFGPDTNIGPIGRIF
        N +PN ++   + ASG  G+ +NN         NF      F+PN +N GP   PS F+  + NQRGIIGS  + G SF  + N G  GRIF
Subjt:  NGNPNPNSNSFSRASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPN-SNFGPH-TPSPFS--NSNQRGIIGS--ASGSSFGPDTNIGPIGRIF

A0A5D3C579 Putative mitochondrial protein1.7e-3655.5Show/hide
Query:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTH-GRRRGRR-
        +++YTSRIKA +DKL A SVSLEDEEILVHTLNGL A FN FRTSIRTR+  ISLEELHTL I+EETT+ K + ++  P A+AAFHP   H  R RGRR 
Subjt:  MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTH-GRRRGRR-

Query:  --NGNPNPNS--NSFSR----ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSN----FGPHTPSPFSNSNQRGIIGSAS--GSSFGPDTNIGPIGRIF
           GNPN NS  NS +R    ASG  G+G+NN         NF      FRPN N    F P +     + NQRGIIGS+   G SF P+TN G  GRIF
Subjt:  --NGNPNPNS--NSFSR----ASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSN----FGPHTPSPFSNSNQRGIIGSAS--GSSFGPDTNIGPIGRIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAATACACCAGCCGCATCAAAGCATTCATCGACAAACTTGTTGCCGCATCCGTCTCCTTAGAAGATGAAGAAATTTTAGTTCATACCTTAAATGGTCTTCCAGC
TACTTTTAATGATTTTCGCACCTCCATTCGAACTCGTAGCGGCACCATCTCCCTTGAAGAACTTCATACTTTGCTCATTGCAGAAGAAACCACCATTAACAAACATGCCG
TCGTCGACCCTACTCCCATCGCAATAGCCGCTTTTCATCCCTCTCCCACTCATGGCCGCAGACGAGGAAGACGAAATGGTAACCCTAATCCTAATTCTAATTCTTTTTCG
CGTGCGTCAGGTGGTCATGGAATCGGGACAAATAATGGGCGTTTCAATGGAGCACCTCAGACAAATTTTCGGCCCAGCACAGGCCAATTTCGGCCCAACTCAAATTTTGG
CCCACATACTCCCAGTCCATTCTCCAACTCAAATCAGCGTGGCATTATTGGATCAGCTTCTGGATCTAGCTTTGGGCCTGACACAAATATTGGGCCTATTGGACGCATTT
TTTTGTCAAATCTGCCAAAAACCTGGTCATGGAGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAATACACCAGCCGCATCAAAGCATTCATCGACAAACTTGTTGCCGCATCCGTCTCCTTAGAAGATGAAGAAATTTTAGTTCATACCTTAAATGGTCTTCCAGC
TACTTTTAATGATTTTCGCACCTCCATTCGAACTCGTAGCGGCACCATCTCCCTTGAAGAACTTCATACTTTGCTCATTGCAGAAGAAACCACCATTAACAAACATGCCG
TCGTCGACCCTACTCCCATCGCAATAGCCGCTTTTCATCCCTCTCCCACTCATGGCCGCAGACGAGGAAGACGAAATGGTAACCCTAATCCTAATTCTAATTCTTTTTCG
CGTGCGTCAGGTGGTCATGGAATCGGGACAAATAATGGGCGTTTCAATGGAGCACCTCAGACAAATTTTCGGCCCAGCACAGGCCAATTTCGGCCCAACTCAAATTTTGG
CCCACATACTCCCAGTCCATTCTCCAACTCAAATCAGCGTGGCATTATTGGATCAGCTTCTGGATCTAGCTTTGGGCCTGACACAAATATTGGGCCTATTGGACGCATTT
TTTTGTCAAATCTGCCAAAAACCTGGTCATGGAGCCCTTGA
Protein sequenceShow/hide protein sequence
MNQYTSRIKAFIDKLVAASVSLEDEEILVHTLNGLPATFNDFRTSIRTRSGTISLEELHTLLIAEETTINKHAVVDPTPIAIAAFHPSPTHGRRRGRRNGNPNPNSNSFS
RASGGHGIGTNNGRFNGAPQTNFRPSTGQFRPNSNFGPHTPSPFSNSNQRGIIGSASGSSFGPDTNIGPIGRIFLSNLPKTWSWSP