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PI0002737 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002737
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr10:10478409..10478903
RNA-Seq ExpressionPI0002737
SyntenyPI0002737
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.2e-5879.5Show/hide
Query:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ
        MA  SS+SDL        ES  S N SVPTSTLFLLSNICN VPIRLDSTNY+LWKYQVSSILKAHSLFGH+D++LPCP KHL S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK
        WLSRDQALITLIN TLSSSALAHVV SVSSK LWLSLEKRYSSNTRSNILDLR ALYTI K
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK

KAA0067173.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-4777.7Show/hide
Query:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ
        MA  SS+SDL+       ES  S N+ VPTSTLFLLSNICN VPIRLDSTNYILWKYQVSSILKAHS FGH+D++LPCP KHL+S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEK
        WLSR QALITLINATLSSSALAHVVGSVSSK LWLSLEK
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEK

TYJ97594.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-4676.26Show/hide
Query:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ
        MA  S +SDL+       ES  S N  VPTSTLFLLSNICN VPIRLDSTNY+LWKYQVSSILKAHSLFGH+D++LPCP KHL S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEK
        WLSRDQALITLINATLSSSAL HVVGSV+SK LWLSLEK
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEK

TYK11141.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.2e-5382.48Show/hide
Query:  SGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALA
        S N SVPTSTLFLLSNICN VPIRLDSTNY+LWKYQVSSILKAHSLFGH+D++LPCP KH  S T   + EINPEY+QWLSRDQALITLINATLSSSALA
Subjt:  SGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALA

Query:  HVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTI
        HVVGSVSSK LWLSLEKRYSSN RSNILDL  A  +I
Subjt:  HVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTI

XP_016902970.1 PREDICTED: uncharacterized protein LOC107991968 [Cucumis melo]2.7e-5377.08Show/hide
Query:  TESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLS
        +E   S N S+PTSTLFLLS+ICN VPIRLDSTNY+LWKYQVSSILKA+S FGH+D++LPCP KHL   T   + +INPEYLQWLS DQALITLIN TLS
Subjt:  TESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLS

Query:  SSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK
        SSALA+VVGSVSSK LWLSLEKRYSSNT+SNILDL  ALYT+KK
Subjt:  SSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK

TrEMBL top hitse value%identityAlignment
A0A1S4E4S1 uncharacterized protein LOC1079919681.3e-5377.08Show/hide
Query:  TESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLS
        +E   S N S+PTSTLFLLS+ICN VPIRLDSTNY+LWKYQVSSILKA+S FGH+D++LPCP KHL   T   + +INPEYLQWLS DQALITLIN TLS
Subjt:  TESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLS

Query:  SSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK
        SSALA+VVGSVSSK LWLSLEKRYSSNT+SNILDL  ALYT+KK
Subjt:  SSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK

A0A5A7T8B0 Retrotransposon protein1.3e-5377.08Show/hide
Query:  TESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLS
        +E   S N S+PTSTLFLLS+ICN VPIRLDSTNY+LWKYQVSSILKA+S FGH+D++LPCP KHL   T   + +INPEYLQWLS DQALITLIN TLS
Subjt:  TESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLS

Query:  SSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK
        SSALA+VVGSVSSK LWLSLEKRYSSNT+SNILDL  ALYT+KK
Subjt:  SSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK

A0A5A7UZE5 Putative mitochondrial protein3.0e-5879.5Show/hide
Query:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ
        MA  SS+SDL        ES  S N SVPTSTLFLLSNICN VPIRLDSTNY+LWKYQVSSILKAHSLFGH+D++LPCP KHL S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK
        WLSRDQALITLIN TLSSSALAHVV SVSSK LWLSLEKRYSSNTRSNILDLR ALYTI K
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKK

A0A5A7VGG0 Retrotransposon protein1.1e-4777.7Show/hide
Query:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ
        MA  SS+SDL+       ES  S N+ VPTSTLFLLSNICN VPIRLDSTNYILWKYQVSSILKAHS FGH+D++LPCP KHL+S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEK
        WLSR QALITLINATLSSSALAHVVGSVSSK LWLSLEK
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEK

A0A5D3CH60 Putative mitochondrial protein5.9e-5482.48Show/hide
Query:  SGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALA
        S N SVPTSTLFLLSNICN VPIRLDSTNY+LWKYQVSSILKAHSLFGH+D++LPCP KH  S T   + EINPEY+QWLSRDQALITLINATLSSSALA
Subjt:  SGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALA

Query:  HVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTI
        HVVGSVSSK LWLSLEKRYSSN RSNILDL  A  +I
Subjt:  HVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTI

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.9e-0929.73Show/hide
Query:  RLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNT
        +L STNY++W  QV ++   + L G LD S   P    A+  +DA P +NP+Y +W  +D+ + + +   +S S    V  + ++  +W +L K Y++ +
Subjt:  RLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNT

Query:  RSNILDLRFAL
          ++  LR  L
Subjt:  RSNILDLRFAL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.9e-1132.11Show/hide
Query:  RLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNT
        +L STNY++W  QV ++   + L G LD S P P    A+  +DA P +NP+Y +W  +D+ + + I   +S S    V  + ++  +W +L K Y++ +
Subjt:  RLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNT

Query:  RSNILDLRF
          ++  LRF
Subjt:  RSNILDLRF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCCAGCTCAGAATCTGACCTCACCCCAGTCATCCCAACCTCCACCGAATCATCACATTCAGGCAATACCTCTGTCCCTACTTCCACTCTCTTCTTACTATC
CAATATTTGCAATCGTGTACCTATTCGTTTAGATTCCACCAATTACATTCTCTGGAAGTATCAAGTCTCCTCTATTCTTAAAGCACACTCTCTTTTTGGCCACCTTGATG
AATCCCTGCCCTGCCCATCCAAACATCTTGCCTCACCCACCTCTGATGCCCACCCGGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACT
CTCATCAACGCTACGTTATCGTCCTCTGCCCTTGCCCATGTAGTCGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACGATACTCCTCCAACACCAGATC
CAACATTCTTGATTTAAGGTTTGCCCTTTATACCATAAAAAAAATCTTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCCAGCTCAGAATCTGACCTCACCCCAGTCATCCCAACCTCCACCGAATCATCACATTCAGGCAATACCTCTGTCCCTACTTCCACTCTCTTCTTACTATC
CAATATTTGCAATCGTGTACCTATTCGTTTAGATTCCACCAATTACATTCTCTGGAAGTATCAAGTCTCCTCTATTCTTAAAGCACACTCTCTTTTTGGCCACCTTGATG
AATCCCTGCCCTGCCCATCCAAACATCTTGCCTCACCCACCTCTGATGCCCACCCGGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACT
CTCATCAACGCTACGTTATCGTCCTCTGCCCTTGCCCATGTAGTCGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACGATACTCCTCCAACACCAGATC
CAACATTCTTGATTTAAGGTTTGCCCTTTATACCATAAAAAAAATCTTCTTCTGA
Protein sequenceShow/hide protein sequence
MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALIT
LINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKKIFF