; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002775 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002775
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein MODIFIER OF SNC1 11-like isoform X1
Genome locationchr08:21979588..21980667
RNA-Seq ExpressionPI0002775
SyntenyPI0002775
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017329.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-5978.4Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSEN LPGPK  LPL+ G  AAGNG VDQHQNRRS           +ATKEG ESQ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        EKRFSRAERFGIDSVCGP+EM  AEELKRKARAERFELLTLSMATDEE KKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

XP_008442609.1 PREDICTED: protein MODIFIER OF SNC1 11-like isoform X1 [Cucumis melo]2.6e-7195.36Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF EELSEN LPGPKQTLPLDFGITAAGNGHVDQHQNR SSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        IDSVCGP+EMA AEELKRKARAERFELLTLSMATDEE KKKARLARFAP L
Subjt:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

XP_011651924.1 protein MODIFIER OF SNC1 11 isoform X1 [Cucumis sativus]6.5e-7092.72Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFT+ELS+N LPGPKQTLPL FGI AAGNGHVDQHQNRRS  TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        IDSVCGP+EMA AEELKRKARAERFELLTLS+ATDEE KKKARLARFAPCL
Subjt:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

XP_023527279.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo]6.8e-5978.4Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDF+EELSEN LPGPK  LPL+ G  AAGNG VDQHQNRRS           +ATKEG ESQ +A+GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        EKRFSRAERFGIDSVCGP+EM  AEELKRKARAERFELLTLSMATDEE KKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

XP_038904188.1 protein MODIFIER OF SNC1 11-like [Benincasa hispida]7.7e-6386.93Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSA--TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER
        MAT+FTEELSEN LPGPKQTLPL+ G  AAGNG VDQHQNRRSSA  TKE IESQ +AVGRIPE H SVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSA--TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAER

Query:  FGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        FGIDSVCGP+EM  AEELKRKARAERFELLTLSMAT EE KKKARLARFAP L
Subjt:  FGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein3.2e-7092.72Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDFT+ELS+N LPGPKQTLPL FGI AAGNGHVDQHQNRRS  TKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        IDSVCGP+EMA AEELKRKARAERFELLTLS+ATDEE KKKARLARFAPCL
Subjt:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X11.3e-7195.36Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF EELSEN LPGPKQTLPLDFGITAAGNGHVDQHQNR SSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        IDSVCGP+EMA AEELKRKARAERFELLTLSMATDEE KKKARLARFAP L
Subjt:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X11.3e-7195.36Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
        MATDF EELSEN LPGPKQTLPLDFGITAAGNGHVDQHQNR SSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFG

Query:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        IDSVCGP+EMA AEELKRKARAERFELLTLSMATDEE KKKARLARFAP L
Subjt:  IDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like9.5e-5977.78Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSEN LPGPK  LPL+ G  AAGNG VDQHQNRRS           +ATKEG ESQ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        EKRFSRAERFGIDSVCGP+EM  AEELKRKARAERFELLTLS+ATDEE KKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

A0A6J1J7D8 protein MODIFIER OF SNC1 11-like2.1e-5877.16Show/hide
Query:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSEN LPGPK  LPL+ G  AAGNG VDQHQNRR+           +ATKEG ES+ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRS-----------SATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL
        EKRFSRAERFGIDSVCGP+EM  AEELKRKARAERFELLTLSMATDEE KKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPNEMANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL

SwissProt top hitse value%identityAlignment
Q9LZ08 Protein MODIFIER OF SNC1 111.6e-1560.92Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPNEMANAEELKRKARAERFELLTLSMATD---EETKKKARLARF
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G      AEELKRKARA+RF + + +  TD   EE KKKARLARF
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPNEMANAEELKRKARAERFELLTLSMATD---EETKKKARLARF

Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein1.2e-1660.92Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPNEMANAEELKRKARAERFELLTLSMATD---EETKKKARLARF
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G      AEELKRKARA+RF + + +  TD   EE KKKARLARF
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPNEMANAEELKRKARAERFELLTLSMATD---EETKKKARLARF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGATTTCACAGAAGAACTGAGCGAAAACATTCTTCCAGGACCAAAACAAACCCTACCGCTAGATTTTGGAATCACAGCCGCTGGTAATGGCCATGTAGATCA
ACACCAAAATCGCCGTTCTTCCGCTACAAAGGAAGGTATTGAATCTCAAAGTTCCGCCGTGGGGAGAATACCGGAGTCTCATGCTTCTGTTTTTGATATCTTTAAGAAGA
TCCGTCGAGCGGAGCGATTTGGGATCCCCGTACGTTTATCGGAGGCAGAAAAGCGATTCTCTCGAGCTGAGAGGTTCGGCATTGATTCAGTGTGTGGACCGAATGAAATG
GCCAACGCAGAAGAGCTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCTTAACTCTGTCTATGGCTACTGACGAAGAGACAAAGAAGAAAGCTCGGCTTGCCAGATT
TGCCCCGTGTTTATAG
mRNA sequenceShow/hide mRNA sequence
TTTATATTATCGATTCTAAATTTCGCGCAGGTCCCGATCTTCCTTCTTCAATGGCGACCGATTTCACAGAAGAACTGAGCGAAAACATTCTTCCAGGACCAAAACAAACC
CTACCGCTAGATTTTGGAATCACAGCCGCTGGTAATGGCCATGTAGATCAACACCAAAATCGCCGTTCTTCCGCTACAAAGGAAGGTATTGAATCTCAAAGTTCCGCCGT
GGGGAGAATACCGGAGTCTCATGCTTCTGTTTTTGATATCTTTAAGAAGATCCGTCGAGCGGAGCGATTTGGGATCCCCGTACGTTTATCGGAGGCAGAAAAGCGATTCT
CTCGAGCTGAGAGGTTCGGCATTGATTCAGTGTGTGGACCGAATGAAATGGCCAACGCAGAAGAGCTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCTTAACTCTG
TCTATGGCTACTGACGAAGAGACAAAGAAGAAAGCTCGGCTTGCCAGATTTGCCCCGTGTTTATAGAATTCCCTTTTGGTTGAACAACGAAGCAACATCAACAATTCTTA
TGCACAGCCAAACTATTATTCATTTGATTGACCAATTGAACAAGCCGAGCTTACCTATAATAACCAACTTCTTGCCTCAAACACCCTGTGGTTATTCGTATCCTGAATAG
TTTAAGGATGCGGAAATTATTT
Protein sequenceShow/hide protein sequence
MATDFTEELSENILPGPKQTLPLDFGITAAGNGHVDQHQNRRSSATKEGIESQSSAVGRIPESHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDSVCGPNEM
ANAEELKRKARAERFELLTLSMATDEETKKKARLARFAPCL