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PI0002785 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002785
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription factor UPBEAT1
Genome locationchr04:13808545..13809353
RNA-Seq ExpressionPI0002785
SyntenyPI0002785
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038125.1 basic helix-loop-helix protein [Cucumis melo var. makuwa]4.8e-3695.56Show/hide
Query:  MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        ME LAKDTVSDRRIAKQVIKKKVEMVSR SRSSEKRICLKRIR+LRKMIPKS+SMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
Subjt:  MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
KAE9618351.1 putative myc-type, basic helix-loop-helix (bHLH) domain-containing protein [Lupinus albus]1.7e-0950.57Show/hide
Query:  LAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        LAK +V  +R  K V+KK+V      SR   K I  +R+R L++++P S+S+EL+GLF ETADYI+ LQ +VR+MQ +V+VL GSDE
Subjt:  LAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
KAG6787023.1 hypothetical protein POTOM_008650 [Populus tomentosa]1.9e-0864.71Show/hide
Query:  KRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        +R+R L+K+IP S+SM L+GLFRETADYI+ LQM+VR+MQ +V VL GSD+
Subjt:  KRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
KGN58133.1 hypothetical protein Csa_017541 [Cucumis sativus]1.3e-3695.56Show/hide
Query:  MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        ME LAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRL+KM+PKS+SMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
Subjt:  MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
XP_034911859.1 transcription factor UPBEAT1-like [Populus alba]1.9e-0864.71Show/hide
Query:  KRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        +R+R L+K+IP S+SM L+GLFRETADYI+ LQM+VR+MQ +V VL GSD+
Subjt:  KRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
TrEMBL top hitse value%identityAlignment
A0A0A0L8J6 Uncharacterized protein6.1e-3795.56Show/hide
Query:  MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        ME LAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRL+KM+PKS+SMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
Subjt:  MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
A0A4V5ZXB7 Uncharacterized protein9.2e-0964.71Show/hide
Query:  KRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        +R+R L+K+IP S+SM L+GLFRETADYI+ LQM+VR+MQ +V VL GSD+
Subjt:  KRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
A0A5A7T9M0 Basic helix-loop-helix protein2.3e-3695.56Show/hide
Query:  MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        ME LAKDTVSDRRIAKQVIKKKVEMVSR SRSSEKRICLKRIR+LRKMIPKS+SMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
Subjt:  MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
A0A6A4QW51 Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein8.3e-1050.57Show/hide
Query:  LAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        LAK +V  +R  K V+KK+V      SR   K I  +R+R L++++P S+S+EL+GLF ETADYI+ LQ +VR+MQ +V+VL GSDE
Subjt:  LAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
B9GSV5 Uncharacterized protein1.6e-0862.75Show/hide
Query:  KRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
        +R+R L+K+IP S+SM L+GLFRETADYI+ LQM+V++MQ +V VL GSD+
Subjt:  KRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE
SwissProt top hitse value%identityAlignment
O22901 Transcription factor UPBEAT11.1e-0639.74Show/hide
Query:  RRIAKQVIKKKVEMVSRSSRSSEKRICL---KRIRRLRKMIPKSQSME-LNGLFRETADYIVWLQMKVRMMQALVHVL
        R+ A++ + KK+ +  R S  + +R C    +R++ L++++P +++ E L+GLFR+TADYI+ L+MKV++MQ +V VL
Subjt:  RRIAKQVIKKKVEMVSRSSRSSEKRICL---KRIRRLRKMIPKSQSME-LNGLFRETADYIVWLQMKVRMMQALVHVL
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators7.7e-0839.74Show/hide
Query:  RRIAKQVIKKKVEMVSRSSRSSEKRICL---KRIRRLRKMIPKSQSME-LNGLFRETADYIVWLQMKVRMMQALVHVL
        R+ A++ + KK+ +  R S  + +R C    +R++ L++++P +++ E L+GLFR+TADYI+ L+MKV++MQ +V VL
Subjt:  RRIAKQVIKKKVEMVSRSSRSSEKRICL---KRIRRLRKMIPKSQSME-LNGLFRETADYIVWLQMKVRMMQALVHVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATTTGGCAAAAGATACGGTCTCGGACAGGCGAATTGCAAAACAAGTGATAAAGAAGAAGGTAGAGATGGTGTCGAGGTCGTCAAGGTCGTCGGAGAAGAGGAT
TTGTTTGAAAAGGATTAGGAGGCTGAGGAAGATGATTCCAAAGAGTCAATCTATGGAGTTGAATGGTCTTTTTAGAGAGACAGCTGATTATATTGTGTGGTTGCAAATGA
AGGTGAGGATGATGCAAGCTTTGGTTCATGTGCTTAATGGCTCTGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGCCAATCAGCTACGCCAATATAGCTCCTTAATTATAAGTTTTTACACACTTCAAATTTTTTGAACAACCAGCCCTTCAAAAAACTAAAATACTTCCCTTTTTCA
TGTGTTGACAACATTATATATGTTGCATGTTTTGTGGTCCCTTTGCCCTAAATTTTATGCATTATCCTCACAATCTCAAAACTTTAAGCTTTTTGAAATCCATTTTTCAT
CATATAAAAACCCCTCATTTTATGTTCTTTTGAATCATCATGAAGGTTTGAAGAGATCTAGCTAGTTTAAGTAATTTATTGAGAGGCATGGAAAATTTGGCAAAAGATAC
GGTCTCGGACAGGCGAATTGCAAAACAAGTGATAAAGAAGAAGGTAGAGATGGTGTCGAGGTCGTCAAGGTCGTCGGAGAAGAGGATTTGTTTGAAAAGGATTAGGAGGC
TGAGGAAGATGATTCCAAAGAGTCAATCTATGGAGTTGAATGGTCTTTTTAGAGAGACAGCTGATTATATTGTGTGGTTGCAAATGAAGGTGAGGATGATGCAAGCTTTG
GTTCATGTGCTTAATGGCTCTGATGAGTGATTATACTGAATCAATCCATTCTATATGTGTACATATATTGATGTATTTTCTTTTCTTCTTTCCTTCCTTTTCTACTTAAG
TTTTATTCTTTGTGTTGTTTATTTCTGGGTTGTGGATTGTAAAAGAAAAACCCTTTCATTTGAATGTCTTAGCTTGAGATCAAAGGGGTGAATTTGTTTACACCTTCATA
AGTTTTTTTTTAATACTAATTAATTAGTTTGATACCTTC
Protein sequenceShow/hide protein sequence
MENLAKDTVSDRRIAKQVIKKKVEMVSRSSRSSEKRICLKRIRRLRKMIPKSQSMELNGLFRETADYIVWLQMKVRMMQALVHVLNGSDE