; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002798 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002798
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionHistone H2B
Genome locationchr08:17096793..17097200
RNA-Seq ExpressionPI0002798
SyntenyPI0002798
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000558 - Histone H2B
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143285.1 probable histone H2B.3 [Cucumis sativus]2.3e-5895.68Show/hide
Query:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAP+AEKKPAEKKPAEKAPAGEKKPRAEKKI KDASSSDKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

XP_008462509.1 PREDICTED: probable histone H2B.3 [Cucumis melo]1.3e-5896.4Show/hide
Query:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKI KDASSSDKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

XP_023754570.1 histone H2B.3 [Lactuca sativa]2.0e-5493.57Show/hide
Query:  MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN
        MAPKAEKKPAEKKP AEKAPA EKKPRAEKK+ KDASS+DKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN
Subjt:  MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN

Query:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

XP_038882933.1 probable histone H2B.3 [Benincasa hispida]4.8e-5694.2Show/hide
Query:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK---KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK
        MAPKAEKK AEKKPAEKAPAGEKKPRAEKK+ KDASS  KK   KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK
Subjt:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK---KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK

Query:  PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

XP_042475367.1 histone H2B.3-like [Macadamia integrifolia]2.0e-5487.16Show/hide
Query:  MAPKAEKKPAEKKP---------AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE
        MAPKAEKKPAEKKP         AEKAP GEKKP+AEKK+ K+A+SSDKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE
Subjt:  MAPKAEKKPAEKKP---------AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE

Query:  SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

TrEMBL top hitse value%identityAlignment
A0A0A0KHB8 Histone H2B1.1e-5895.68Show/hide
Query:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAP+AEKKPAEKKPAEKAPAGEKKPRAEKKI KDASSSDKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A1S3CH60 Histone H2B6.5e-5996.4Show/hide
Query:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKI KDASSSDKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A2J6LYU1 Histone H2B9.7e-5593.57Show/hide
Query:  MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN
        MAPKAEKKPAEKKP AEKAPA EKKPRAEKK+ KDASS+DKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN
Subjt:  MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN

Query:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A5A7SJ40 Histone H2B6.5e-5996.4Show/hide
Query:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKI KDASSSDKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A6S7PJY9 Histone H2B9.7e-5593.57Show/hide
Query:  MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN
        MAPKAEKKPAEKKP AEKAPA EKKPRAEKK+ KDASS+DKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN
Subjt:  MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN

Query:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

SwissProt top hitse value%identityAlignment
O22582 Histone H2B2.6e-5284.46Show/hide
Query:  MAPKAEKKPAEKKP-------AEKAPAGEKKPRAEKKILKD--ASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE
        MAPKAEKKPAEKKP       AEKAPA EKKP+A KK+ K+  A++ DKK    KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE
Subjt:  MAPKAEKKPAEKKP-------AEKAPAGEKKPRAEKKILKD--ASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE

Query:  SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        +SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

O65819 Histone H2B.3 (Fragment)5.7e-5288.24Show/hide
Query:  AEKKPAEKKP-AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPT
        AEKKPAEK P AEKAPA EKKP+A KK+ KDA++ DKK    KK+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPT
Subjt:  AEKKPAEKKP-AEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPT

Query:  ITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        ITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  ITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Q1SU99 Probable histone H2B.33.2e-5591.85Show/hide
Query:  KAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK---KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTI
        KAEKKPAEKKPAEKAPA EKKP+AEKKI K+ SS  KK   KKSVETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTI
Subjt:  KAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK---KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTI

Query:  TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Q9LFF6 Histone H2B.81.1e-5287.77Show/hide
Query:  MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKKKKS---VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAPK AEKKPA KKPAEKAPA EK P+AEKKI K+  S  KKKKS   +ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKKKKS---VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Q9ZUS0 Histone H2B.42.3e-5388.49Show/hide
Query:  MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN
        MAPK AEKKPAEKKPA KAPA EK P+AEKKI KDA  S+KK    KKSVETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQESS+LARYN
Subjt:  MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN

Query:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
        KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Subjt:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS

Arabidopsis top hitse value%identityAlignment
AT2G28720.1 Histone superfamily protein3.4e-5280.13Show/hide
Query:  MAPKAEKKPAEKKPAEKAPA----------GEKKPRAEKKILKDASSS--DKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL
        MAPKA KKPAEKKPAEKAPA           EKKP+A KK+ K+A +   +KK    KKS ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL
Subjt:  MAPKAEKKPAEKKPAEKAPA----------GEKKPRAEKKILKDASSS--DKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL

Query:  AQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        AQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  AQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT2G37470.1 Histone superfamily protein1.6e-5488.49Show/hide
Query:  MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN
        MAPK AEKKPAEKKPA KAPA EK P+AEKKI KDA  S+KK    KKSVETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQESS+LARYN
Subjt:  MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKK----KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYN

Query:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
        KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Subjt:  KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS

AT3G46030.1 Histone superfamily protein5.3e-5384.93Show/hide
Query:  MAPKAEKKPAEKKP------AEKAPAGEKKPRAEKKILKDA-SSSDK----KKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS
        MAPKAEKKPAEKKP      AEKAPA EKKP+A KK+ K+A +  DK    KKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS
Subjt:  MAPKAEKKPAEKKP------AEKAPAGEKKPRAEKKILKDA-SSSDK----KKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS

Query:  RLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        +LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  RLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT3G53650.1 Histone superfamily protein8.1e-5487.77Show/hide
Query:  MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKKKKS---VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAPK AEKKPA KKPAEKAPA EK P+AEKKI K+  S  KKKKS   +ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKKKKS---VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT5G59910.1 Histone superfamily protein1.2e-5282.12Show/hide
Query:  MAPKAEKKPAEKKP-----------AEKAPAGEKKPRAEKKILKDA-SSSDK----KKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL
        MAPKAEKKPAEKKP           AEKAPA EKKP+A KK+ K+A +  DK    KKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL
Subjt:  MAPKAEKKPAEKKP-----------AEKAPAGEKKPRAEKKILKDA-SSSDK----KKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL

Query:  AQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        AQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  AQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAAAGGCAGAGAAGAAGCCTGCCGAGAAGAAACCAGCCGAGAAGGCTCCAGCCGGCGAGAAGAAGCCTCGAGCGGAGAAAAAGATTCTGAAAGATGCTTCGTC
GTCAGATAAGAAGAAGAAGAGCGTCGAGACTTACAAGATTTACATCTTCAAGGTCTTGAAGCAGGTCCATCCCGATATTGGAATCTCTAGCAAGGCCATGGGGATTATGA
ACAGTTTTATTAACGACATTTTTGAGAAGCTTGCTCAGGAATCGTCGCGATTGGCTAGGTATAACAAGAAGCCGACCATCACCTCAAGGGAAATCCAAACGGCTGTTCGA
CTTGTGCTTCCTGGTGAACTTGCGAAGCATGCTGTATCGGAAGGGACGAAAGCGGTTACCAAATTCACCAGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAAAGGCAGAGAAGAAGCCTGCCGAGAAGAAACCAGCCGAGAAGGCTCCAGCCGGCGAGAAGAAGCCTCGAGCGGAGAAAAAGATTCTGAAAGATGCTTCGTC
GTCAGATAAGAAGAAGAAGAGCGTCGAGACTTACAAGATTTACATCTTCAAGGTCTTGAAGCAGGTCCATCCCGATATTGGAATCTCTAGCAAGGCCATGGGGATTATGA
ACAGTTTTATTAACGACATTTTTGAGAAGCTTGCTCAGGAATCGTCGCGATTGGCTAGGTATAACAAGAAGCCGACCATCACCTCAAGGGAAATCCAAACGGCTGTTCGA
CTTGTGCTTCCTGGTGAACTTGCGAAGCATGCTGTATCGGAAGGGACGAAAGCGGTTACCAAATTCACCAGTTCTTAG
Protein sequenceShow/hide protein sequence
MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKILKDASSSDKKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR
LVLPGELAKHAVSEGTKAVTKFTSS