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PI0002799 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002799
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr06:19518979..19519583
RNA-Seq ExpressionPI0002799
SyntenyPI0002799
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-4970.99Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IV+VDNN+ S+EEV+NS EI QRTSVFDRIKP T RSSVF RLSMATKEEENQCPTST  RTSAFKRL ISTSK+ R STSAFDRLK+T+ Q +R+MK+L
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIHS VPSRMKRKL V I+ E SLTVKP+ II  NP NEG++   DE+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
KAA0061331.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.2e-4969.14Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IVEVDNN+ S+EEV+NS EI Q+TSVFDRIKP T RSS+F RLSMATK+EENQCPT T  RTSAFKRL IS SK+DR +TSAFDRLK+T+ Q +R+MK+L
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIHS VPSRMKRKL V I+ E SLTVKP+ II  NPTNEG++   DE+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.2e-4969.75Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IVEVDNN+ S+EEV+NS EI QRTSVFDRIKP T RSSVF RLSMATKEE+NQCPTST  RTSAFKRL ISTSK+ R STS FDRLK+T+ Q +R+MK+L
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIH+ VPSRMKRKL V I+ E SLTVKP+ II  NP NEG++   DE+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.2e-4970.99Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IVEVDNN+ S +EVNNS EINQRTSVFDRIKPST RSSVF RLSMATKEEENQCPT    RTS FKRL ISTSK+DR STSAFDRLK+T+ Q +R+MK+ 
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIHS VPSRMKRKL V I+ E SLTVKP+ II  NPTNEG++    E+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
TYK14888.1 gag protease polyprotein [Cucumis melo var. makuwa]3.2e-4970.99Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IVEVDNN+ S +EVNNS EINQRTSVFDRIKPST RSSVF RLSMATKEEENQCPT    RTS FKRL ISTSK+DR STSAFDRLK+T+ Q +R+MK+ 
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIHS VPSRMKRKL V I+ E SLTVKP+ II  NPTNEG++    E+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein9.2e-5070.99Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IV+VDNN+ S+EEV+NS EI QRTSVFDRIKP T RSSVF RLSMATKEEENQCPTST  RTSAFKRL ISTSK+ R STSAFDRLK+T+ Q +R+MK+L
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIHS VPSRMKRKL V I+ E SLTVKP+ II  NP NEG++   DE+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
A0A5A7UI09 Retrotransposon gag protein3.5e-4969.75Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IVEVDNN+ S+EEV+NS EI QRTSVFDRIKP T RSSVF RLSMATKEE+NQCPTST  RTSAFKRL ISTSK+ R STS FDRLK+T+ Q +R+MK+L
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIH+ VPSRMKRKL V I+ E SLTVKP+ II  NP NEG++   DE+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
A0A5A7V6H5 Ty3-gypsy retrotransposon protein1.6e-4969.14Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IVEVDNN+ S+EEV+NS EI Q+TSVFDRIKP T RSS+F RLSMATK+EENQCPT T  RTSAFKRL IS SK+DR +TSAFDRLK+T+ Q +R+MK+L
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIHS VPSRMKRKL V I+ E SLTVKP+ II  NPTNEG++   DE+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
A0A5D3CD55 Ty3-gypsy retrotransposon protein1.6e-4970.99Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IVEVDNN+ S +EVNNS EINQRTSVFDRIKPST RSSVF RLSMATKEEENQCPT    RTS FKRL ISTSK+DR STSAFDRLK+T+ Q +R+MK+ 
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIHS VPSRMKRKL V I+ E SLTVKP+ II  NPTNEG++    E+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
A0A5D3CUI5 Gag protease polyprotein1.6e-4970.99Show/hide
Query:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL
        IVEVDNN+ S +EVNNS EINQRTSVFDRIKPST RSSVF RLSMATKEEENQCPT    RTS FKRL ISTSK+DR STSAFDRLK+T+ Q +R+MK+ 
Subjt:  IVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTL

Query:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
        KAK   E N++ KIHS VPSRMKRKL V I+ E SLTVKP+ II  NPTNEG++    E+KS
Subjt:  KAKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCAGCGACCTCAACGATCGCATAGTAGAAGTTGACAACAATCATGCATCTTTTGAAGAAGTCAACAATTCAAAGGAAATCAATCAAAGGACTTCTGTCTTTGA
TCGTATCAAGCCTTCAACTGCTCGATCTTCGGTCTTTCACAGGTTGAGTATGGCCACGAAAGAAGAAGAAAATCAATGTCCAACGTCTACTTCTATTCGAACTTCAGCTT
TCAAAAGGCTAAGAATCTCCACATCAAAAAGAGATCGATCTTCAACATCTGCTTTTGATCGTCTCAAAGTGACAAGCGGCCAACATGAAAGAAAGATGAAAACCTTGAAG
GCAAAATCATTATGTGAAGCAAACAATAATAGTAAAATTCATAGTCTTGTCCCTTCACGCATGAAAAGGAAGTTGTATGTTGTTATAAGTATAGAAGATTCCCTAACAGT
GAAGCCAAAACTCATCATATTGGCAAATCCCACAAATGAAGGAGAGGATCACAGTCACGATGAAAGTAAAAGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCAGCGACCTCAACGATCGCATAGTAGAAGTTGACAACAATCATGCATCTTTTGAAGAAGTCAACAATTCAAAGGAAATCAATCAAAGGACTTCTGTCTTTGA
TCGTATCAAGCCTTCAACTGCTCGATCTTCGGTCTTTCACAGGTTGAGTATGGCCACGAAAGAAGAAGAAAATCAATGTCCAACGTCTACTTCTATTCGAACTTCAGCTT
TCAAAAGGCTAAGAATCTCCACATCAAAAAGAGATCGATCTTCAACATCTGCTTTTGATCGTCTCAAAGTGACAAGCGGCCAACATGAAAGAAAGATGAAAACCTTGAAG
GCAAAATCATTATGTGAAGCAAACAATAATAGTAAAATTCATAGTCTTGTCCCTTCACGCATGAAAAGGAAGTTGTATGTTGTTATAAGTATAGAAGATTCCCTAACAGT
GAAGCCAAAACTCATCATATTGGCAAATCCCACAAATGAAGGAGAGGATCACAGTCACGATGAAAGTAAAAGCTTCTAA
Protein sequenceShow/hide protein sequence
MTSSDLNDRIVEVDNNHASFEEVNNSKEINQRTSVFDRIKPSTARSSVFHRLSMATKEEENQCPTSTSIRTSAFKRLRISTSKRDRSSTSAFDRLKVTSGQHERKMKTLK
AKSLCEANNNSKIHSLVPSRMKRKLYVVISIEDSLTVKPKLIILANPTNEGEDHSHDESKSF