; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002805 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002805
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr07:19152698..19153737
RNA-Seq ExpressionPI0002805
SyntenyPI0002805
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031748.1 uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa]3.0e-1031.74Show/hide
Query:  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV------PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNT
        DSDEQ  + LA L++K                 N   T+S  P+I+   + ++SS++V       +  S  +P+  S++  P+ +D P +   I + +  
Subjt:  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV------PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNT

Query:  IPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEENVQK------------------P
           T   +  +P V+       +     T   P  S+P  K      +N T  +   KIP N+ +VPIDGISFH EENVQ+                   
Subjt:  IPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEENVQK------------------P

Query:  FYPRLIKELIVNLPSQFNDPSNPDYYTIHI
        FY +LI+E IVNL S FNDPS+PDY T+HI
Subjt:  FYPRLIKELIVNLPSQFNDPSNPDYYTIHI

KAA0032911.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.1e-1131.74Show/hide
Query:  DSDSDEQDHISLADLVRKSK--------QKGKQC---VANTYPISDN-----PPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAP
        D D D+ D +  A L++K+         Q G      ++ + P   N      P   S EP + T V +     + P       PNI SE V    D+ P
Subjt:  DSDSDEQDHISLADLVRKSK--------QKGKQC---VANTYPISDN-----PPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAP

Query:  NLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEEN-------VQKP
            ++P AS  IP  + P+ +                              KS+  +   T  ++  KIPPN+ +VPIDGISFH+EEN       VQ+ 
Subjt:  NLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEEN-------VQKP

Query:  FYPRLIKELIVNLPSQFNDPSNPDYYTIHI
            LI+E IVNLP +FNDPS+PDY T+HI
Subjt:  FYPRLIKELIVNLPSQFNDPSNPDYYTIHI

KAA0056211.1 uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa]7.8e-1127.25Show/hide
Query:  MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSD
        MVNT K  Y  + S +A P+A   S S  +      +R K  P R  +     K +   ++  +  +   +V +      P  P   ++       +D D
Subjt:  MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSD

Query:  SDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHP
        SD QD++ L  L+ K     K   A   P SD P    S+E      V      D          P ISS + + V+     L  S P+A+   P+    
Subjt:  SDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHP

Query:  SSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------
                        PPP+  P+ P          +P  P  K++  +   T  +   KIP NV +VPIDGISFH+EE+VQ                  
Subjt:  SSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------

Query:  ------------------------KPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI
                                 PFYP+LI+E IVNLP++FN+PS+ DY T+HI
Subjt:  ------------------------KPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI

TYK08882.1 uncharacterized protein E5676_scaffold1411G00040 [Cucumis melo var. makuwa]1.7e-1033.03Show/hide
Query:  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV------PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNT
        DSDEQD + LA L++K                 N   T+S  P+I+   + ++SS++V       +  S  +P   S++  P+ +D P +   I + +  
Subjt:  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV------PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNT

Query:  IPQTTHPSSKQPSV---FQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEENV---QKPFYPRLIKELIVN
           T   +  +P V   FQ +          T      S+P  K      +N T  +   KIP N+ +VPIDGISFH EEN     + FY +LI++ IVN
Subjt:  IPQTTHPSSKQPSV---FQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEENV---QKPFYPRLIKELIVN

Query:  LPSQFNDPSNPDYYTIHI
        L S FNDPS+PDY T+HI
Subjt:  LPSQFNDPSNPDYYTIHI

XP_008465030.1 PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo]7.8e-1127.25Show/hide
Query:  MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSD
        MVNT K  Y  + S +A P+A   S S  +      +R K  P R  +     K +   ++  +  +   +V +      P  P   ++       +D D
Subjt:  MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSD

Query:  SDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHP
        SD QD++ L  L+ K     K   A   P SD P    S+E      V      D          P ISS + + V+     L  S P+A+   P+    
Subjt:  SDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHP

Query:  SSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------
                        PPP+  P+ P          +P  P  K++  +   T  +   KIP NV +VPIDGISFH+EE+VQ                  
Subjt:  SSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------

Query:  ------------------------KPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI
                                 PFYP+LI+E IVNLP++FN+PS+ DY T+HI
Subjt:  ------------------------KPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI

TrEMBL top hitse value%identityAlignment
A0A1S3CMY0 uncharacterized protein LOC1035027463.8e-1127.25Show/hide
Query:  MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSD
        MVNT K  Y  + S +A P+A   S S  +      +R K  P R  +     K +   ++  +  +   +V +      P  P   ++       +D D
Subjt:  MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSD

Query:  SDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHP
        SD QD++ L  L+ K     K   A   P SD P    S+E      V      D          P ISS + + V+     L  S P+A+   P+    
Subjt:  SDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHP

Query:  SSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------
                        PPP+  P+ P          +P  P  K++  +   T  +   KIP NV +VPIDGISFH+EE+VQ                  
Subjt:  SSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------

Query:  ------------------------KPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI
                                 PFYP+LI+E IVNLP++FN+PS+ DY T+HI
Subjt:  ------------------------KPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI

A0A5A7STQ8 Gag-pol polyprotein9.9e-1231.74Show/hide
Query:  DSDSDEQDHISLADLVRKSK--------QKGKQC---VANTYPISDN-----PPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAP
        D D D+ D +  A L++K+         Q G      ++ + P   N      P   S EP + T V +     + P       PNI SE V    D+ P
Subjt:  DSDSDEQDHISLADLVRKSK--------QKGKQC---VANTYPISDN-----PPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAP

Query:  NLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEEN-------VQKP
            ++P AS  IP  + P+ +                              KS+  +   T  ++  KIPPN+ +VPIDGISFH+EEN       VQ+ 
Subjt:  NLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEEN-------VQKP

Query:  FYPRLIKELIVNLPSQFNDPSNPDYYTIHI
            LI+E IVNLP +FNDPS+PDY T+HI
Subjt:  FYPRLIKELIVNLPSQFNDPSNPDYYTIHI

A0A5A7URQ6 Uncharacterized protein3.8e-1127.25Show/hide
Query:  MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSD
        MVNT K  Y  + S +A P+A   S S  +      +R K  P R  +     K +   ++  +  +   +V +      P  P   ++       +D D
Subjt:  MVNTRKCKYKSQHSSEAIPHA---SASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQ--NPLKPFGPRAFSFS------NDSD

Query:  SDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHP
        SD QD++ L  L+ K     K   A   P SD P    S+E      V      D          P ISS + + V+     L  S P+A+   P+    
Subjt:  SDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHP

Query:  SSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------
                        PPP+  P+ P          +P  P  K++  +   T  +   KIP NV +VPIDGISFH+EE+VQ                  
Subjt:  SSKQPSVFQAKSSAQNPPPSSTPVDP----------NPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQ------------------

Query:  ------------------------KPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI
                                 PFYP+LI+E IVNLP++FN+PS+ DY T+HI
Subjt:  ------------------------KPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI

A0A5D3CC65 Uncharacterized protein8.4e-1133.03Show/hide
Query:  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV------PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNT
        DSDEQD + LA L++K                 N   T+S  P+I+   + ++SS++V       +  S  +P   S++  P+ +D P +   I + +  
Subjt:  DSDEQDHISLADLVRKSKQKGKQCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNV------PFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNT

Query:  IPQTTHPSSKQPSV---FQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEENV---QKPFYPRLIKELIVN
           T   +  +P V   FQ +          T      S+P  K      +N T  +   KIP N+ +VPIDGISFH EEN     + FY +LI++ IVN
Subjt:  IPQTTHPSSKQPSV---FQAKSSAQNPPPSSTPVDPNPSKPHSKSKVPKVKN-TNLSSNTKIPPNVLTVPIDGISFHNEENV---QKPFYPRLIKELIVN

Query:  LPSQFNDPSNPDYYTIHI
        L S FNDPS+PDY T+HI
Subjt:  LPSQFNDPSNPDYYTIHI

A0A5D3DB71 Reverse transcriptase Ty1/copia-type domain-containing protein1.4e-1045.26Show/hide
Query:  PVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQK-------------PFYPRLIKELIVNLPSQFNDPSNPDYYTIHI
        P DP       + + PKV         KIP N+ +VPI+GISFH EENVQ+             PFYP+ I+E IVN+P +FN+PS+PDY T+HI
Subjt:  PVDPNPSKPHSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQK-------------PFYPRLIKELIVNLPSQFNDPSNPDYYTIHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAATACTCGAAAGTGCAAATACAAGTCTCAGCATTCTTCTGAAGCCATTCCGCATGCCTCTGCCTCCAGGGACAATGCTTCTTCTCCTCATTCCAAAAGGCTCAA
AATGATTCCCACAAGGCATCCGTTTGGAAGATCGGTTAACAAAGATAAGTCTTCTTTTTCTACTGCATTTAAACACTTCATGCATCAAAGTTCTGTTCAACAAAATCCTC
TAAAACCCTTTGGTCCAAGAGCATTTAGTTTTTCTAATGATTCTGATTCTGATGAACAAGATCATATAAGTTTAGCAGACCTTGTTAGGAAATCCAAACAAAAAGGAAAA
CAATGTGTTGCTAATACATATCCTATTTCTGATAACCCTCCTCAAACTCAATCAAAAGAACCTGTCATCAATACTCATGTTGAGTCAAATAATTCGTCTGATAATGTTCC
TTTTGAAAAATCTTCCACAAAACCAAATATCTCATCTGAGAATGTTAATCCTGTCTATGACGATGCCCCTAATTTATCAAATTCCATTCCTGAAGCATCAAATACTATCC
CACAAACCACTCATCCTTCTTCTAAACAACCATCTGTTTTTCAGGCTAAGTCTTCTGCTCAAAATCCACCCCCATCTTCTACACCAGTTGATCCTAATCCTTCTAAACCA
CACTCTAAGTCTAAAGTTCCTAAAGTCAAAAATACTAATCTATCATCTAATACAAAAATTCCTCCAAATGTTCTTACAGTACCTATAGATGGAATTTCCTTCCACAATGA
AGAAAATGTCCAAAAACCTTTTTATCCTCGATTAATCAAAGAACTTATTGTTAATCTTCCATCTCAATTCAATGATCCAAGCAATCCTGATTATTATACAATTCATATAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAATACTCGAAAGTGCAAATACAAGTCTCAGCATTCTTCTGAAGCCATTCCGCATGCCTCTGCCTCCAGGGACAATGCTTCTTCTCCTCATTCCAAAAGGCTCAA
AATGATTCCCACAAGGCATCCGTTTGGAAGATCGGTTAACAAAGATAAGTCTTCTTTTTCTACTGCATTTAAACACTTCATGCATCAAAGTTCTGTTCAACAAAATCCTC
TAAAACCCTTTGGTCCAAGAGCATTTAGTTTTTCTAATGATTCTGATTCTGATGAACAAGATCATATAAGTTTAGCAGACCTTGTTAGGAAATCCAAACAAAAAGGAAAA
CAATGTGTTGCTAATACATATCCTATTTCTGATAACCCTCCTCAAACTCAATCAAAAGAACCTGTCATCAATACTCATGTTGAGTCAAATAATTCGTCTGATAATGTTCC
TTTTGAAAAATCTTCCACAAAACCAAATATCTCATCTGAGAATGTTAATCCTGTCTATGACGATGCCCCTAATTTATCAAATTCCATTCCTGAAGCATCAAATACTATCC
CACAAACCACTCATCCTTCTTCTAAACAACCATCTGTTTTTCAGGCTAAGTCTTCTGCTCAAAATCCACCCCCATCTTCTACACCAGTTGATCCTAATCCTTCTAAACCA
CACTCTAAGTCTAAAGTTCCTAAAGTCAAAAATACTAATCTATCATCTAATACAAAAATTCCTCCAAATGTTCTTACAGTACCTATAGATGGAATTTCCTTCCACAATGA
AGAAAATGTCCAAAAACCTTTTTATCCTCGATTAATCAAAGAACTTATTGTTAATCTTCCATCTCAATTCAATGATCCAAGCAATCCTGATTATTATACAATTCATATAT
GA
Protein sequenceShow/hide protein sequence
MVNTRKCKYKSQHSSEAIPHASASRDNASSPHSKRLKMIPTRHPFGRSVNKDKSSFSTAFKHFMHQSSVQQNPLKPFGPRAFSFSNDSDSDEQDHISLADLVRKSKQKGK
QCVANTYPISDNPPQTQSKEPVINTHVESNNSSDNVPFEKSSTKPNISSENVNPVYDDAPNLSNSIPEASNTIPQTTHPSSKQPSVFQAKSSAQNPPPSSTPVDPNPSKP
HSKSKVPKVKNTNLSSNTKIPPNVLTVPIDGISFHNEENVQKPFYPRLIKELIVNLPSQFNDPSNPDYYTIHI