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PI0002839 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002839
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr11:23033752..23034171
RNA-Seq ExpressionPI0002839
SyntenyPI0002839
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046821.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-5375.74Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEKS AG FAD+W +LDN+S+L +LSVEIPLS+GKSAWVLQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G +TKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]5.1e-5375Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEK  AG FAD+W  LDN+S+L +LSVE+PLS+GKSAWVLQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G VTKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.1e-5375Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEK  AG FAD+W  LDN+S+L +LSVEIPLS+GKSAW+LQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G VTKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
TYK04516.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-5375.74Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEKS AG FAD+W +LDN+S+L +LSVEIPLS+GKSAWVLQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G +TKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]6.7e-5375Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEK  AG FAD+W  LDN+S+L +LSVE+PLS+GKSAWVLQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G VTKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein3.2e-5375Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEK  AG FAD+W  LDN+S+L +LSVE+PLS+GKSAWVLQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G VTKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
A0A5A7TX42 Uncharacterized protein2.5e-5375Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEK  AG FAD+W  LDN+S+L +LSVE+PLS+GKSAWVLQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G VTKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
A0A5A7TZN9 Putative mitochondrial protein1.1e-5375.74Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEKS AG FAD+W +LDN+S+L +LSVEIPLS+GKSAWVLQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G +TKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
A0A5A7UET3 Putative mitochondrial protein2.5e-5375Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEK  AG FAD+W  LDN+S+L +LSVEIPLS+GKSAW+LQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G VTKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
A0A5D3C267 Putative mitochondrial protein1.1e-5375.74Show/hide
Query:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW
        MVYFTERFLSG RHL I +D NQPREDGLSL+VEKS AG FAD+W +LDN+S+L +LSVEIPLS+GKSAWVLQSSIH EAPN+ R LTLG R+IEGQT W
Subjt:  MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
        G +TKVPGEFCFTDCYWEWLE VVGR    +T L+Y
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRMGDFSTMLVY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACCGAACGATTCTTGTCTGGGAATAGGCACCTTACAATCCATACTGATGAGAATCAACCAAGAGAAGACGGTCTCAGTCTCCTTGTAGAGAAGTCATT
GGCGGGTCCTTTTGCAGATTATTGGTCGAACCTAGACAACAGCTCGATTCTTTCCAAATTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAGCGCATGGGTCCTGCAAT
CTTCTATCCATGGTGAGGCTCCTAATGCCGATCGAGTCCTCACTCTCGGACATCGTATAATTGAAGGCCAAACCCCTTGGGGTGCTGTGACTAAAGTCCCAGGAGAATTT
TGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTTGTAGTTGGTCGAATGGGCGACTTCTCTACGATGCTCGTTTATTTGGCGCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACCGAACGATTCTTGTCTGGGAATAGGCACCTTACAATCCATACTGATGAGAATCAACCAAGAGAAGACGGTCTCAGTCTCCTTGTAGAGAAGTCATT
GGCGGGTCCTTTTGCAGATTATTGGTCGAACCTAGACAACAGCTCGATTCTTTCCAAATTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAGCGCATGGGTCCTGCAAT
CTTCTATCCATGGTGAGGCTCCTAATGCCGATCGAGTCCTCACTCTCGGACATCGTATAATTGAAGGCCAAACCCCTTGGGGTGCTGTGACTAAAGTCCCAGGAGAATTT
TGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTTGTAGTTGGTCGAATGGGCGACTTCTCTACGATGCTCGTTTATTTGGCGCCGTAA
Protein sequenceShow/hide protein sequence
MVYFTERFLSGNRHLTIHTDENQPREDGLSLLVEKSLAGPFADYWSNLDNSSILSKLSVEIPLSQGKSAWVLQSSIHGEAPNADRVLTLGHRIIEGQTPWGAVTKVPGEF
CFTDCYWEWLEFVVGRMGDFSTMLVYLAP