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PI0002886 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002886
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr08:6719850..6720518
RNA-Seq ExpressionPI0002886
SyntenyPI0002886
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7826900.1 Transposon Ty3-G Gag-Pol polyprotein [Senna tora]5.0e-1133.51Show/hide
Query:  MQLLETLINVRLDRLEQRFQDRERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREERLGPRHGSRGRRGL--RNSYHVDQIMLPLFFRSFSNPDAYL
        M ++   I  RLDR +QRF      E    V G+ D E  S  +    D  +    R ER    H  +  R +  RN+  +   + P  F+  S+ D Y+
Subjt:  MQLLETLINVRLDRLEQRFQDRERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREERLGPRHGSRGRRGL--RNSYHVDQIMLPLFFRSFSNPDAYL

Query:  LWEEKIDAIYEYHHYSEKEKIELDVSTFEEYALTWQ----TLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML
         WE K++ ++  H+YSE++K++L    F +YA+ W      LKQGSKSV  YY+E+ + +   NI E++E TM  F  GLN++I +++
Subjt:  LWEEKIDAIYEYHHYSEKEKIELDVSTFEEYALTWQ----TLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML

KAG2411297.1 hypothetical protein I3760_Q013700, partial [Carya illinoinensis]7.0e-1334.48Show/hide
Query:  QDRERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKIDAIYEYHHYSEKE
        +DR R E RR+   + + E DSE  E     V  G  R  R   G R   RGR G+       ++ +P  F+  ++P+AYL WE+KI+ I+E H+YSE++
Subjt:  QDRERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKIDAIYEYHHYSEKE

Query:  KIELDVSTFEEYALTW---------QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML
        K++L V  F +YA+ W         +  ++GS+SV  Y++E+ + +   N+ E++E TM  F  GLN +I +++
Subjt:  KIELDVSTFEEYALTW---------QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML

PKI52812.1 hypothetical protein CRG98_026812, partial [Punica granatum]8.5e-1135.35Show/hide
Query:  FRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKIELDVSTFEEYALTW----QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML
        F+  ++PD Y+ WE K++ +++ H+YSE++K++L    F +YA+ W      LKQGSK+V  Y++E+ + +   N+ E++E TM  F  G N +I +++
Subjt:  FRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKIELDVSTFEEYALTW----QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML

XP_024447566.1 uncharacterized protein LOC112325356 [Populus trichocarpa]6.5e-1137.74Show/hide
Query:  FRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKIELDVSTFEEYALTWQTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML-----
        F+   +P+AYL WE+K++ I+  H YSE++K++L V  F +YA+ W     G+KSV  Y +EL + +   NI +++E TM+ F  GLN  I +++     
Subjt:  FRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKIELDVSTFEEYALTWQTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML-----

Query:  IDQEEI
        +D EE+
Subjt:  IDQEEI

XP_040955923.1 uncharacterized protein LOC107906583 [Gossypium hirsutum]1.0e-1135.2Show/hide
Query:  DQIMLP-LFFRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKIELDVSTFEEYALTW---------------------QTLKQGSKSVNTYYEELLLLLEEV
        D+  LP L  +  ++PDAYL WE +++ ++E ++YSE++K+ L V  F +YAL W                     Q++KQG++SV  YY+E+ + + + 
Subjt:  DQIMLP-LFFRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKIELDVSTFEEYALTW---------------------QTLKQGSKSVNTYYEELLLLLEEV

Query:  NIYEEKETTMNLFYTGLNEKIVDML
        NI E++E TM  F  GLN KI +++
Subjt:  NIYEEKETTMNLFYTGLNEKIVDML

TrEMBL top hitse value%identityAlignment
A0A2N9EJA0 Retrotrans_gag domain-containing protein4.4e-1334.34Show/hide
Query:  RERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKI
        R+R +  R+V  + + E D E  E     V  G  R  R   G      G  G+  S    ++ +P  F+  +NP  YL WE+KID +++ H+YSE++K+
Subjt:  RERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKI

Query:  ELDVSTFEEYALTW------QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIV
        +L V  F +YA+ W      Q L QGS+SV  Y++E+ + +   NI E++E TM  F +GLN  ++
Subjt:  ELDVSTFEEYALTW------QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIV

A0A2N9FXN5 Retrotrans_gag domain-containing protein6.8e-1433.7Show/hide
Query:  INVRLDRLEQRFQDRE---RHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREERLGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKI
        ++ R+D++E R +++    R+  RR+ V   ++EE+   + FD +   D      R G R G    R   N   + ++ +P  F+  S+P+AYL WE+K+
Subjt:  INVRLDRLEQRFQDRE---RHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREERLGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKI

Query:  DAIYEYHHYSEKEKIELDVSTFEEYALT-----WQTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVD
        + +++ H+YSE +K++L V  F EYA+T     ++ L+QGS+SV  YY+E+ + +   N+ E++E TM  F  GLN +I D
Subjt:  DAIYEYHHYSEKEKIELDVSTFEEYALT-----WQTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVD

A0A2N9GBV6 Uncharacterized protein6.8e-1434.32Show/hide
Query:  RERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKI
        R+R    R+V  + + E D E  E     V  G  R  R   G      GR G+  S    ++ +P  F+  ++P+ YL WE+KID +++YH+YSE++K+
Subjt:  RERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKIDAIYEYHHYSEKEKI

Query:  ELDVSTFEEYALTW------QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML
        +L V  F +YA+ W      Q L Q S+SV  Y++E+ + +   N+ E++E TM  F +GLN  I ++L
Subjt:  ELDVSTFEEYALTW------QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML

A0A2N9GTF8 CCHC-type domain-containing protein2.0e-1332.61Show/hide
Query:  RLDRLEQRFQD----RERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKI
        R+D  E   ++    R+R    R+V  + + E D E  E     V  G  R  R   G      GR G+  S    ++ +P  F+  ++P+ YL WE+KI
Subjt:  RLDRLEQRFQD----RERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKI

Query:  DAIYEYHHYSEKEKIELDVSTFEEYALTW------QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML
        D +++ H+YSE++K++L V  F +YA+ W      Q L QGS+SV  Y++E+ + +   N+ E++E TM  F +GLN  I +++
Subjt:  DAIYEYHHYSEKEKIELDVSTFEEYALTW------QTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML

A0A2N9IYR8 Reverse transcriptase domain-containing protein7.5e-1332.58Show/hide
Query:  RLDRLEQRFQD----RERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKI
        R+D  E   ++    R+R    R+V  + + E D E  E     V  G  R  R   G      GR G+  S    ++ +P  F+  ++P+ YL WE+KI
Subjt:  RLDRLEQRFQD----RERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREER--LGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKI

Query:  DAIYEYHHYSEKEKIELDVSTFEEYALTWQTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML
        D +++YH+YSE++K++L V  F  YA+ W     G +SV  Y++E+ + +   NI E++E TM  F++GLN  I +++
Subjt:  DAIYEYHHYSEKEKIELDVSTFEEYALTWQTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTCTTAGAAACTTTAATCAATGTGAGGTTAGATAGACTAGAACAAAGGTTTCAAGATAGGGAAAGACATGAAGTAAGGAGACAAGTTGTGGGGGATCCTGACAA
GGAAGAAGATTCAGAGCAAAATGAATTTGACTTTGACCCTGTTATAGATGGGCCTAGGAGAGAGGAGCGACTTGGCCCGAGACATGGCTCGAGGGGAAGAAGAGGTTTGA
GAAATAGTTACCATGTTGATCAAATCATGCTTCCATTATTCTTTAGAAGTTTTTCAAATCCAGATGCATATCTTTTGTGGGAGGAGAAAATTGATGCCATATATGAATAT
CACCATTACAGTGAAAAGGAAAAGATAGAACTTGATGTTTCTACGTTCGAAGAATATGCACTAACATGGCAGACTTTGAAACAAGGGAGCAAAAGTGTGAACACTTACTA
TGAAGAGTTGTTGTTACTACTTGAGGAGGTTAACATATACGAGGAAAAGGAAACTACCATGAATCTATTCTACACTGGACTTAATGAGAAAATTGTCGATATGCTTATCG
ACCAAGAAGAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTCTTAGAAACTTTAATCAATGTGAGGTTAGATAGACTAGAACAAAGGTTTCAAGATAGGGAAAGACATGAAGTAAGGAGACAAGTTGTGGGGGATCCTGACAA
GGAAGAAGATTCAGAGCAAAATGAATTTGACTTTGACCCTGTTATAGATGGGCCTAGGAGAGAGGAGCGACTTGGCCCGAGACATGGCTCGAGGGGAAGAAGAGGTTTGA
GAAATAGTTACCATGTTGATCAAATCATGCTTCCATTATTCTTTAGAAGTTTTTCAAATCCAGATGCATATCTTTTGTGGGAGGAGAAAATTGATGCCATATATGAATAT
CACCATTACAGTGAAAAGGAAAAGATAGAACTTGATGTTTCTACGTTCGAAGAATATGCACTAACATGGCAGACTTTGAAACAAGGGAGCAAAAGTGTGAACACTTACTA
TGAAGAGTTGTTGTTACTACTTGAGGAGGTTAACATATACGAGGAAAAGGAAACTACCATGAATCTATTCTACACTGGACTTAATGAGAAAATTGTCGATATGCTTATCG
ACCAAGAAGAAATTTGA
Protein sequenceShow/hide protein sequence
MQLLETLINVRLDRLEQRFQDRERHEVRRQVVGDPDKEEDSEQNEFDFDPVIDGPRREERLGPRHGSRGRRGLRNSYHVDQIMLPLFFRSFSNPDAYLLWEEKIDAIYEY
HHYSEKEKIELDVSTFEEYALTWQTLKQGSKSVNTYYEELLLLLEEVNIYEEKETTMNLFYTGLNEKIVDMLIDQEEI