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PI0002887 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002887
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionagamous-like MADS-box protein AGL62
Genome locationchr12:12347321..12347904
RNA-Seq ExpressionPI0002887
SyntenyPI0002887
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65064.2 hypothetical protein Csa_022797 [Cucumis sativus]5.4e-3449.3Show/hide
Query:  KSLGRQKIEIKKLGKKSRQQVKTFRQGR------QTFPSLRCLDRRPRLLLTR--IIYTFRHPN-----------NIVPLKPAEAYLPI-----------
        KS GR+KIEIK+L K + +QV TF + R          SL C      LL +    +YTF HPN           N +P KPAEAYLP+           
Subjt:  KSLGRQKIEIKKLGKKSRQQVKTFRQGR------QTFPSLRCLDRRPRLLLTR--IIYTFRHPN-----------NIVPLKPAEAYLPI-----------

Query:  AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQCLELFHLAEN
        AEFEIEK+RA +RLR S+RFWWDE LE MR++ELK F SSL++LRANVA RLEKI AMR  D  VTPS        W    SI L   NQC   FH+ EN
Subjt:  AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQCLELFHLAEN

Query:  GSVAMDWKPENWG
         S AMDW+ E WG
Subjt:  GSVAMDWKPENWG

XP_004139610.1 agamous-like MADS-box protein AGL62 [Cucumis sativus]6.4e-3549.77Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGR------QTFPSLRCLDRRPRLLLTR--IIYTFRHPN-----------NIVPLKPAEAYLPI---------
        MKKS GR+KIEIK+L K + +QV TF + R          SL C      LL +    +YTF HPN           N +P KPAEAYLP+         
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGR------QTFPSLRCLDRRPRLLLTR--IIYTFRHPN-----------NIVPLKPAEAYLPI---------

Query:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQCLELFHLA
          AEFEIEK+RA +RLR S+RFWWDE LE MR++ELK F SSL++LRANVA RLEKI AMR  D  VTPS        W    SI L   NQC   FH+ 
Subjt:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQCLELFHLA

Query:  ENGSVAMDWKPENWG
        EN S AMDW+ E WG
Subjt:  ENGSVAMDWKPENWG

XP_008458954.1 PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]1.9e-4757.87Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLLLTR--IIYTFRHP------------NNIVPLKPAEAYLPI---------
        MKKSLGR+KIEIKKL KKS QQV   ++    F      S+ C      L+ +    IYTF HP            NN VP KPAEAYLPI         
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLLLTR--IIYTFRHP------------NNIVPLKPAEAYLPI---------

Query:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAE-NNQCLELFHL
          AEFEIEKRRA +R R S+RFWWDEPLE M+I+ELKRF SSLVELRANV ERLEKI        CVTPSIDI E+IQWP TSSI LA  NN CL  FH+
Subjt:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAE-NNQCLELFHL

Query:  AENGSVAMDWKPENWG
        AEN SVAMDW+ E WG
Subjt:  AENGSVAMDWKPENWG

XP_022986583.1 agamous-like MADS-box protein AGL61 [Cucurbita maxima]3.1e-2949.75Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLL--LTRIIYTFRHPN-----------NIVPLKPAEAYLPI----------
        MKKSLGR+KIEIKKL KKS QQV   ++    F      S+ C      L+   +  +YTF HPN           N  P KPAEAYLP+          
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLL--LTRIIYTFRHPN-----------NIVPLKPAEAYLPI----------

Query:  -AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACV-------TPSIDIVENIQW-PLTSSIDLAENNQ
         AEF+IEKRRA +RL ++DRFWWDEPLE M+I+ELKRF SSLVELR  VAER+EK +AMR   + +        PSI +V N+Q  P T SIDL EN Q
Subjt:  -AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACV-------TPSIDIVENIQW-PLTSSIDLAENNQ

XP_038895446.1 agamous-like MADS-box protein AGL61 [Benincasa hispida]1.2e-3651.64Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGR------QTFPSLRCLDRRPRLLLT--RIIYTFRHPN-----------NIVPLKP--------AEAYLPIA
        MKK LGR+KIEIKKL KKS QQV TF + R          S+ C      L+ T    IYTF HPN           N V  KP        +EA    A
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGR------QTFPSLRCLDRRPRLLLT--RIIYTFRHPN-----------NIVPLKP--------AEAYLPIA

Query:  EFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQC-LELFHLAEN
        EFE+EKR A +RLR SDRFWWD+ LECMRI+ELKRF SSL++LRANVA+R+E   AM+  D  VTPSI+   N+ WP +SS   A NNQC    FHL  N
Subjt:  EFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQC-LELFHLAEN

Query:  GSVAMDWKPENWG
         S AMDW+PE WG
Subjt:  GSVAMDWKPENWG

TrEMBL top hitse value%identityAlignment
A0A0A0LW53 MADS-box domain-containing protein3.1e-3549.77Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGR------QTFPSLRCLDRRPRLLLTR--IIYTFRHPN-----------NIVPLKPAEAYLPI---------
        MKKS GR+KIEIK+L K + +QV TF + R          SL C      LL +    +YTF HPN           N +P KPAEAYLP+         
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGR------QTFPSLRCLDRRPRLLLTR--IIYTFRHPN-----------NIVPLKPAEAYLPI---------

Query:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQCLELFHLA
          AEFEIEK+RA +RLR S+RFWWDE LE MR++ELK F SSL++LRANVA RLEKI AMR  D  VTPS        W    SI L   NQC   FH+ 
Subjt:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQCLELFHLA

Query:  ENGSVAMDWKPENWG
        EN S AMDW+ E WG
Subjt:  ENGSVAMDWKPENWG

A0A1S3CAA4 agamous-like MADS-box protein AGL629.3e-4857.87Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLLLTR--IIYTFRHP------------NNIVPLKPAEAYLPI---------
        MKKSLGR+KIEIKKL KKS QQV   ++    F      S+ C      L+ +    IYTF HP            NN VP KPAEAYLPI         
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLLLTR--IIYTFRHP------------NNIVPLKPAEAYLPI---------

Query:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAE-NNQCLELFHL
          AEFEIEKRRA +R R S+RFWWDEPLE M+I+ELKRF SSLVELRANV ERLEKI        CVTPSIDI E+IQWP TSSI LA  NN CL  FH+
Subjt:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAE-NNQCLELFHL

Query:  AENGSVAMDWKPENWG
        AEN SVAMDW+ E WG
Subjt:  AENGSVAMDWKPENWG

A0A5D3CLQ1 Agamous-like MADS-box protein AGL629.3e-4857.87Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLLLTR--IIYTFRHP------------NNIVPLKPAEAYLPI---------
        MKKSLGR+KIEIKKL KKS QQV   ++    F      S+ C      L+ +    IYTF HP            NN VP KPAEAYLPI         
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLLLTR--IIYTFRHP------------NNIVPLKPAEAYLPI---------

Query:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAE-NNQCLELFHL
          AEFEIEKRRA +R R S+RFWWDEPLE M+I+ELKRF SSLVELRANV ERLEKI        CVTPSIDI E+IQWP TSSI LA  NN CL  FH+
Subjt:  --AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAE-NNQCLELFHL

Query:  AENGSVAMDWKPENWG
        AEN SVAMDW+ E WG
Subjt:  AENGSVAMDWKPENWG

A0A6J1FUA9 agamous-like MADS-box protein AGL612.1e-2846.01Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLLLT--RIIYTFRHPN-----------NIVPLKPAEAYLPI----------
        MKKSLGR+KIEIKKL KKS QQV   ++    F      S+ C      L+ +    +YTF HPN           N  P KPAEAYLP+          
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLLLT--RIIYTFRHPN-----------NIVPLKPAEAYLPI----------

Query:  -AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDA-------CVTPSIDIVE----------------NIQ
         AE++IEKRR  +RL ++DRFWWDEPLE M+I++LKRF SSLV+LR  VAER+EK +AMR   +          PSID+VE                N+Q
Subjt:  -AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDA-------CVTPSIDIVE----------------NIQ

Query:  WPLT-SSIDLAEN
        WPLT  SIDL EN
Subjt:  WPLT-SSIDLAEN

A0A6J1JGY4 agamous-like MADS-box protein AGL611.5e-2949.75Show/hide
Query:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLL--LTRIIYTFRHPN-----------NIVPLKPAEAYLPI----------
        MKKSLGR+KIEIKKL KKS QQV   ++    F      S+ C      L+   +  +YTF HPN           N  P KPAEAYLP+          
Subjt:  MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFP-----SLRCLDRRPRLL--LTRIIYTFRHPN-----------NIVPLKPAEAYLPI----------

Query:  -AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACV-------TPSIDIVENIQW-PLTSSIDLAENNQ
         AEF+IEKRRA +RL ++DRFWWDEPLE M+I+ELKRF SSLVELR  VAER+EK +AMR   + +        PSI +V N+Q  P T SIDL EN Q
Subjt:  -AEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACV-------TPSIDIVENIQW-PLTSSIDLAENNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17310.1 MADS-box transcription factor family protein2.5e-0526.95Show/hide
Query:  KKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTF---PSLRCLDRRPRLLLT----RIIYTFRHPNNIVPLKPAEAYLPIAEFEIEKRRATKRL-RTSDRFW
        K + GRQKIEIKK+ +++++QV   ++ R  F     L  L      ++T      IY F H + ++     + YL  +  ++E           S R W
Subjt:  KKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTF---PSLRCLDRRPRLLLT----RIIYTFRHPNNIVPLKPAEAYLPIAEFEIEKRRATKRL-RTSDRFW

Query:  WDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAEN
        W+ P+E +  EEL+ + ++L  LR N+ +++  +   RT D      I++   + W  T  +   EN
Subjt:  WDEPLECMRIEELKRFCSSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATCTTTAGGGCGTCAAAAGATTGAGATCAAAAAGCTTGGGAAAAAGAGTAGACAGCAAGTTAAAACTTTTCGACAAGGCCGCCAAACTTTCCCTTCTCTACG
ATGCTTAGATCGTCGTCCTCGTCTTCTCTTGACGCGGATAATCTATACATTCCGCCATCCCAATAATATTGTTCCGCTCAAGCCGGCGGAGGCCTACCTCCCTATTGCGG
AGTTTGAAATCGAGAAAAGGCGCGCGACGAAGAGATTGAGGACTAGTGATCGATTTTGGTGGGATGAGCCGCTGGAATGTATGAGAATCGAGGAGTTGAAGCGATTTTGT
TCTTCATTGGTCGAATTGAGAGCAAATGTGGCGGAGAGACTGGAGAAAATTTCGGCGATGAGAACGAGAGATGCTTGTGTAACTCCATCCATTGACATCGTCGAAAACAT
CCAATGGCCGTTAACGTCGTCGATTGACCTTGCCGAAAACAACCAATGTCTGGAGTTGTTTCATCTTGCTGAAAATGGCTCTGTGGCGATGGATTGGAAACCGGAGAATT
GGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATCTTTAGGGCGTCAAAAGATTGAGATCAAAAAGCTTGGGAAAAAGAGTAGACAGCAAGTTAAAACTTTTCGACAAGGCCGCCAAACTTTCCCTTCTCTACG
ATGCTTAGATCGTCGTCCTCGTCTTCTCTTGACGCGGATAATCTATACATTCCGCCATCCCAATAATATTGTTCCGCTCAAGCCGGCGGAGGCCTACCTCCCTATTGCGG
AGTTTGAAATCGAGAAAAGGCGCGCGACGAAGAGATTGAGGACTAGTGATCGATTTTGGTGGGATGAGCCGCTGGAATGTATGAGAATCGAGGAGTTGAAGCGATTTTGT
TCTTCATTGGTCGAATTGAGAGCAAATGTGGCGGAGAGACTGGAGAAAATTTCGGCGATGAGAACGAGAGATGCTTGTGTAACTCCATCCATTGACATCGTCGAAAACAT
CCAATGGCCGTTAACGTCGTCGATTGACCTTGCCGAAAACAACCAATGTCTGGAGTTGTTTCATCTTGCTGAAAATGGCTCTGTGGCGATGGATTGGAAACCGGAGAATT
GGGGTTAG
Protein sequenceShow/hide protein sequence
MKKSLGRQKIEIKKLGKKSRQQVKTFRQGRQTFPSLRCLDRRPRLLLTRIIYTFRHPNNIVPLKPAEAYLPIAEFEIEKRRATKRLRTSDRFWWDEPLECMRIEELKRFC
SSLVELRANVAERLEKISAMRTRDACVTPSIDIVENIQWPLTSSIDLAENNQCLELFHLAENGSVAMDWKPENWG