; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002890 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002890
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr11:27289866..27294264
RNA-Seq ExpressionPI0002890
SyntenyPI0002890
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605088.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.5e-12787.59Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASL FSV+SHNR SS+PQLS RNS RSIVSA+PRPYGDSSTIGLSSKT GAPLNLD+ DFL TSTSYGPI A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAA          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD MYAAFTGQ +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_004148854.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucumis sativus]8.3e-12987.59Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        MVVASPFTASLSFSVAS+NR SSI QLSRRNSHRSIVSA PRPYGDSSTIGLSSKTNGAPLNLDDKDFL TSTSY PI AR+ NPP+MPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ A          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++KMYAAFTGQSIE +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]1.7e-13794.53Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        MVVASPFTASL+FSVAS NRTSSIPQLSRR SHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD MYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]7.0e-12887.96Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASL FSV+SHNR SS+PQLSRRNS RSIVSA+PRPYGDSSTIGLSSKT GAPLNLD+ DFL TSTSYGPI A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAA          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD MYAAFTGQ +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]1.9e-13391.61Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        M VAS FTASLSFSV+SHNRTSSI QLSRRNSHRSIVSALPRPYGDSSTIGLSSKT G PL++DDKDFL TSTSYGPIEARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+DKMYAAFTGQ IEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit4.0e-12987.59Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        MVVASPFTASLSFSVAS+NR SSI QLSRRNSHRSIVSA PRPYGDSSTIGLSSKTNGAPLNLDDKDFL TSTSY PI AR+ NPP+MPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ A          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++KMYAAFTGQSIE +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit8.1e-13894.53Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        MVVASPFTASL+FSVAS NRTSSIPQLSRR SHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD MYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit3.8e-12787.55Show/hide
Query:  VVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLS
        + AS FTASL+FSV+S+NRTSSIP LSRRNS RS+VS LPRPYGDSSTIGLSSK+  APL+LDDKDFL  STSY PIEA+KGNPPIMPAVMTPGGPLDLS
Subjt:  VVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA          +KGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKM++AFTGQ +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit3.4e-12887.96Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        MVVAS FTASL FSV+SHNR SS+PQLSRRNS RSIVSA+PRPYGDSSTIGLSSKT GAPLNLD+ DFL TSTSYGPI A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAA          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD MYAAFTGQ +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit2.9e-12787.23Show/hide
Query:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL
        M VAS FTASL FSV+SHNR SS+PQLSRRNS RSIVSA+PRPYGDSSTIGLSSKT G PLNLD+ DFL TSTSYGPI A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAA          +KGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD MYAAFTGQ +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

SwissProt top hitse value%identityAlignment
Q2L256 ATP-dependent Clp protease proteolytic subunit1.9e-3544.19Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNS
        D+ S L R R+IF+  PVN   A  V++QL+ L + + D DI  Y+N PGGS Y+ +AI+D M ++KP V T+C G+AA          KKG R+++PNS
Subjt:  DLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVL
        RIMIHQP  G  G   D++ Q  E +  R +++++ A  TGQS+E++   TERD F+S  +AL +GL+D VL
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVL

Q59993 ATP-dependent Clp protease proteolytic subunit 28.6e-3642.5Show/hide
Query:  PIEARKGN--PPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGT
        P+    GN    ++P V+   G      D+ S L R RIIF+G PV+  VA  +++QL+ L   D + DI +Y+N PGGS Y+ LAIYD M  I+P V T
Subjt:  PIEARKGN--PPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGT

Query:  VCFGVAAK----------KGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVL
        +CFG+AA           KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQ +EK+Q+ TERD F+S  EA E+GLID V+
Subjt:  VCFGVAAK----------KGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVL

Q7W8X2 ATP-dependent Clp protease proteolytic subunit1.9e-3544.19Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNS
        D+ S L R R+IF+  PVN   A  V++QL+ L + + D DI  Y+N PGGS Y+ +AIYD M +IKP V T+C G+AA          KKG R+ +PNS
Subjt:  DLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVL
        RIMIHQP  G  G   D++ Q  E +  R +++++ A  TGQ +E++   TERD F+S  +A+ +GL+D VL
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVL

Q7WK83 ATP-dependent Clp protease proteolytic subunit1.9e-3544.19Show/hide
Query:  DLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNS
        D+ S L R R+IF+  PVN   A  V++QL+ L + + D DI  Y+N PGGS Y+ +AIYD M +IKP V T+C G+AA          KKG R+ +PNS
Subjt:  DLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVL
        RIMIHQP  G  G   D++ Q  E +  R +++++ A  TGQ +E++   TERD F+S  +A+ +GL+D VL
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVL

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic1.2e-10171.32Show/hide
Query:  LSFSVASHN-RTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSAL  PYGDS   GLSS  +G+P+ +D+K     +  +G IEA+KGNPP+MP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVASHN-RTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRIMIHQPQSGC
        IFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAA          +KGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRIMIHQPQSGC

Query:  GGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        GGHVEDVRRQVNEA+++R K+D+MYAAFTGQ +EKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  GGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 59.7e-3541.18Show/hide
Query:  DFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKP
        D  + S+ Y P  A+   PP M           + S LF+ RII  G  V+  +A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P
Subjt:  DFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKP

Query:  KVGTVCFGVAAK----------KGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLI
         V TVC G+AA           KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQS+EK+ Q T+RD F+S  EA E+GLI
Subjt:  KVGTVCFGVAAK----------KGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLI

Query:  DGVL
        DGV+
Subjt:  DGVL

AT1G11750.1 CLP protease proteolytic subunit 68.3e-10371.32Show/hide
Query:  LSFSVASHN-RTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSAL  PYGDS   GLSS  +G+P+ +D+K     +  +G IEA+KGNPP+MP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVASHN-RTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRIMIHQPQSGC
        IFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAA          +KGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPNSRIMIHQPQSGC

Query:  GGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        GGHVEDVRRQVNEA+++R K+D+MYAAFTGQ +EKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  GGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

AT1G11750.2 CLP protease proteolytic subunit 61.4e-10269.42Show/hide
Query:  LSFSVASHN-RTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDK----------DFLLTSTSY---GPIEARKGNPPIMPAVMTPGG
        LSFS  + N + +S    ++RN  R IVSAL  PYGDS   GLSS  +G+P+ +D+K          + L +ST Y   G IEA+KGNPP+MP+VMTPGG
Subjt:  LSFSVASHN-RTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDK----------DFLLTSTSY---GPIEARKGNPPIMPAVMTPGG

Query:  PLDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMP
        PLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAA          +KGMRYAMP
Subjt:  PLDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMP

Query:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        N+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D+MYAAFTGQ +EKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

AT1G66670.1 CLP protease proteolytic subunit 35.9e-3239.66Show/hide
Query:  LDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPN
        LD +++L R RI+F+G  V+   A  VISQL+ L   D + DI +++N PGGS  + + IYD M   K  V TVC G+AA           KG RY MPN
Subjt:  LDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA----------KKGMRYAMPN

Query:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLE
        S++MIHQP    GG   ++  ++ E +  + K++K+++  TG+   +++  T+RD FL+  EA E+GLID V++
Subjt:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLE

AT5G45390.1 CLP protease P49.1e-3339.55Show/hide
Query:  GGPLDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAAK----------KGMRYA
        G   D+  +L R RI+F+G  ++  VA  ++SQL+ L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AA           KG R+A
Subjt:  GGPLDLSSVLFRNRIIFIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAAK----------KGMRYA

Query:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLE
        MPN+RIMIHQP  G  G   DV  Q  E + +++ V  + A  T +S E+V +  +RDR++S  EA+E+GLIDGV++
Subjt:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTAGCTTCACCTTTTACTGCATCTCTCAGTTTCTCTGTCGCTTCGCACAATCGAACGTCATCAATTCCTCAACTTTCTCGAAGAAATTCTCACAGGTCCATAGT
CTCTGCTTTGCCGAGGCCTTATGGCGACTCCTCCACAATTGGATTATCGAGTAAAACAAATGGGGCACCTCTAAATCTTGACGATAAAGATTTTCTTCTCACCAGTACAA
GTTATGGACCTATAGAGGCTAGGAAAGGTAATCCACCCATTATGCCTGCAGTGATGACACCAGGAGGGCCATTGGATCTCTCGTCTGTGTTATTTAGGAATCGTATTATA
TTTATTGGTCAACCTGTCAACTCAACCGTGGCACAGCGAGTTATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCAGATATTCTGGTATATCTGAATTGCCC
TGGTGGAAGTACATACTCAGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAAAAAGGGAATGCGCTATG
CTATGCCAAATTCTCGAATTATGATTCATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTT
GACAAGATGTATGCTGCATTTACTGGCCAATCTATAGAGAAAGTACAACAATACACGGAGAGGGATCGATTTTTGTCTGTTTCCGAGGCTTTAGAGTTTGGGCTTATTGA
TGGTGTGCTGGAAACAGAATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTAGCTTCACCTTTTACTGCATCTCTCAGTTTCTCTGTCGCTTCGCACAATCGAACGTCATCAATTCCTCAACTTTCTCGAAGAAATTCTCACAGGTCCATAGT
CTCTGCTTTGCCGAGGCCTTATGGCGACTCCTCCACAATTGGATTATCGAGTAAAACAAATGGGGCACCTCTAAATCTTGACGATAAAGATTTTCTTCTCACCAGTACAA
GTTATGGACCTATAGAGGCTAGGAAAGGTAATCCACCCATTATGCCTGCAGTGATGACACCAGGAGGGCCATTGGATCTCTCGTCTGTGTTATTTAGGAATCGTATTATA
TTTATTGGTCAACCTGTCAACTCAACCGTGGCACAGCGAGTTATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCAGATATTCTGGTATATCTGAATTGCCC
TGGTGGAAGTACATACTCAGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAAAAAGGGAATGCGCTATG
CTATGCCAAATTCTCGAATTATGATTCATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTT
GACAAGATGTATGCTGCATTTACTGGCCAATCTATAGAGAAAGTACAACAATACACGGAGAGGGATCGATTTTTGTCTGTTTCCGAGGCTTTAGAGTTTGGGCTTATTGA
TGGTGTGCTGGAAACAGAATACTGA
Protein sequenceShow/hide protein sequence
MVVASPFTASLSFSVASHNRTSSIPQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTNGAPLNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRII
FIGQPVNSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAAKKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKV
DKMYAAFTGQSIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY