; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002920 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002920
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:6197792..6199775
RNA-Seq ExpressionPI0002920
SyntenyPI0002920
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33754.1 retrotransposon protein [Cucumis melo subsp. melo]2.4e-7837.1Show/hide
Query:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA
        MIHESDLVC QST+MD+R F ILCHLLR   GL+STE++DVEEMV+MFLH++AHD+KNRVIQ+EFVRS ET+SRHFN+ LLAV+RL++EL+K+P PVT+ 
Subjt:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA

Query:  CTGPRWKWFQ------------------------------------------------------------------------------------------
        C   RWK F+                                                                                          
Subjt:  CTGPRWKWFQ------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --TKEEEAYLVEAL---------------------------VELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAE
          T  E+   +E                             +ELVS+GGWKSDNGTFR GYLAQL RMMAEK+SGC ++ +  IDCRIK +K+TFQAIAE
Subjt:  --TKEEEAYLVEAL---------------------------VELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAE

Query:  MHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVP-GGFEGFSADYGNDTEIPMMYS
        M GP+CSGF WNDE KCI+AE+ELFDNWV+S   AKGLLN PF +YD L YVFG+D ATG  AETF D+GSN P GG++ F    GN+ + P +YS
Subjt:  MHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVP-GGFEGFSADYGNDTEIPMMYS

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-8541.74Show/hide
Query:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA
        MIH SDLVC QST+MD+RCF ILCHLLRT  GL STEV+DVEEMV+MFLHI+AHD+KNRVIQREF+RS ETISRHFN+ LLAV+RLHDELLKKPQPV N 
Subjt:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA

Query:  CTGPRWKWFQ------------------------------------------------------------------------------------------
        CT  RW+WF+                                                                                          
Subjt:  CTGPRWKWFQ------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------TKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERE
              TKEEEA     LVELV+ GGW+SDNGTFR GYL QL RMMA K+ GCNI  S TID RIK MK+ F A+AEM GP+CSGF WNDE KCI+AE+E
Subjt:  ------TKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERE

Query:  LFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS
        +FD+W  SH  AKGLLNK F HYD L YVFGKD ATG RAE+F DIGSN P G++ F+AD   DT+   MYS
Subjt:  LFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS

KAA0035078.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-7553.04Show/hide
Query:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRV-----------------IQ--REFVRSRETISRHFNLDLL
        MIHESDLVC QST+MD++ F I CHLLR   GL+STE++DVEEMV  ++   A   +N +                 +Q  R    +    + +FN+   
Subjt:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRV-----------------IQ--REFVRSRETISRHFNLDLL

Query:  AVVRLHDELLKKPQPVTNACTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAE
             H       +       GP   W  TKEEE  LVE L+ELVS+GGWKSDNGTFR GYLAQL RMMAEK+ GC ++ +  IDCRIK +K+TFQAIAE
Subjt:  AVVRLHDELLKKPQPVTNACTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAE

Query:  MHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVP-GGFEGFSADYGNDTEIPMMYS
        M GP+CSGF WNDE KCIIAE+ELFDNWV+SH  AKGLLNKPF +YD L YVFG+D ATG  AETF D+GSN P GG++ F    G + + P MYS
Subjt:  MHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVP-GGFEGFSADYGNDTEIPMMYS

TYK04867.1 retrotransposon protein [Cucumis melo var. makuwa]5.2e-7345.48Show/hide
Query:  IHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNAC
        IHES+LVC QST+MD++ F IL HLLR   GL+STE++DVEEMV+ FLH++AHD+KNR+IQREFVRS ET+SR+FNL LLAVVR+++E +++    TN C
Subjt:  IHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNAC

Query:  TGPRWKWFQ---------------------------------------TKEEEAYLVE------------------------------------------
           RWK F+                                       TK +  Y++                                           
Subjt:  TGPRWKWFQ---------------------------------------TKEEEAYLVE------------------------------------------

Query:  -------------------ALVELVSV-GGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCII
                            ++  V V GGWKSDNGTFR GYLAQL  MMAEK+ GC ++ +  IDCRIK +K+TFQ IAEM GP+CSGF WNDE KCII
Subjt:  -------------------ALVELVSV-GGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCII

Query:  AERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGAR
        AE+ELFDNW++SH TAKGLLNK FS+YD L YVFG+D AT  R
Subjt:  AERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGAR

TYK05796.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-7654.23Show/hide
Query:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA
        MIHESDLVC QST+MD+R F ILCHLL+T  GL+STE++DVEEMV+MFLH++AHDMKN VIQREFVRS ET+SRHFNL LL VVRL++EL+K+P PVTN 
Subjt:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA

Query:  CTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRS--GYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNM------KKTFQAIAEMHGPSCSGFNW
        C   RW+ F     E  L       + V    +D  TFR+  G +A     +      C  +G     C + N            AI EM GP+CSGF W
Subjt:  CTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRS--GYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNM------KKTFQAIAEMHGPSCSGFNW

Query:  NDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS
        NDE KCII E+ELFDNWV+SH   KGLLNKPF +YD L YVFG+D ATG   ETF+++GSN P G++ F    GN+ E P +YS
Subjt:  NDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein2.2e-8541.74Show/hide
Query:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA
        MIH SDLVC QST+MD+RCF ILCHLLRT  GL STEV+DVEEMV+MFLHI+AHD+KNRVIQREF+RS ETISRHFN+ LLAV+RLHDELLKKPQPV N 
Subjt:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA

Query:  CTGPRWKWFQ------------------------------------------------------------------------------------------
        CT  RW+WF+                                                                                          
Subjt:  CTGPRWKWFQ------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------TKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERE
              TKEEEA     LVELV+ GGW+SDNGTFR GYL QL RMMA K+ GCNI  S TID RIK MK+ F A+AEM GP+CSGF WNDE KCI+AE+E
Subjt:  ------TKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERE

Query:  LFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS
        +FD+W  SH  AKGLLNK F HYD L YVFGKD ATG RAE+F DIGSN P G++ F+AD   DT+   MYS
Subjt:  LFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS

A0A5A7SWU2 Retrotransposon protein7.0e-7653.04Show/hide
Query:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRV-----------------IQ--REFVRSRETISRHFNLDLL
        MIHESDLVC QST+MD++ F I CHLLR   GL+STE++DVEEMV  ++   A   +N +                 +Q  R    +    + +FN+   
Subjt:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRV-----------------IQ--REFVRSRETISRHFNLDLL

Query:  AVVRLHDELLKKPQPVTNACTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAE
             H       +       GP   W  TKEEE  LVE L+ELVS+GGWKSDNGTFR GYLAQL RMMAEK+ GC ++ +  IDCRIK +K+TFQAIAE
Subjt:  AVVRLHDELLKKPQPVTNACTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAE

Query:  MHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVP-GGFEGFSADYGNDTEIPMMYS
        M GP+CSGF WNDE KCIIAE+ELFDNWV+SH  AKGLLNKPF +YD L YVFG+D ATG  AETF D+GSN P GG++ F    G + + P MYS
Subjt:  MHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVP-GGFEGFSADYGNDTEIPMMYS

A0A5D3BZA2 Retrotransposon protein2.5e-7345.48Show/hide
Query:  IHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNAC
        IHES+LVC QST+MD++ F IL HLLR   GL+STE++DVEEMV+ FLH++AHD+KNR+IQREFVRS ET+SR+FNL LLAVVR+++E +++    TN C
Subjt:  IHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNAC

Query:  TGPRWKWFQ---------------------------------------TKEEEAYLVE------------------------------------------
           RWK F+                                       TK +  Y++                                           
Subjt:  TGPRWKWFQ---------------------------------------TKEEEAYLVE------------------------------------------

Query:  -------------------ALVELVSV-GGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCII
                            ++  V V GGWKSDNGTFR GYLAQL  MMAEK+ GC ++ +  IDCRIK +K+TFQ IAEM GP+CSGF WNDE KCII
Subjt:  -------------------ALVELVSV-GGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCII

Query:  AERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGAR
        AE+ELFDNW++SH TAKGLLNK FS+YD L YVFG+D AT  R
Subjt:  AERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGAR

A0A5D3C620 Retrotransposon protein1.8e-7654.23Show/hide
Query:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA
        MIHESDLVC QST+MD+R F ILCHLL+T  GL+STE++DVEEMV+MFLH++AHDMKN VIQREFVRS ET+SRHFNL LL VVRL++EL+K+P PVTN 
Subjt:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA

Query:  CTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRS--GYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNM------KKTFQAIAEMHGPSCSGFNW
        C   RW+ F     E  L       + V    +D  TFR+  G +A     +      C  +G     C + N            AI EM GP+CSGF W
Subjt:  CTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRS--GYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNM------KKTFQAIAEMHGPSCSGFNW

Query:  NDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS
        NDE KCII E+ELFDNWV+SH   KGLLNKPF +YD L YVFG+D ATG   ETF+++GSN P G++ F    GN+ E P +YS
Subjt:  NDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS

E5GBB2 Retrotransposon protein1.2e-7837.1Show/hide
Query:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA
        MIHESDLVC QST+MD+R F ILCHLLR   GL+STE++DVEEMV+MFLH++AHD+KNRVIQ+EFVRS ET+SRHFN+ LLAV+RL++EL+K+P PVT+ 
Subjt:  MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNA

Query:  CTGPRWKWFQ------------------------------------------------------------------------------------------
        C   RWK F+                                                                                          
Subjt:  CTGPRWKWFQ------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --TKEEEAYLVEAL---------------------------VELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAE
          T  E+   +E                             +ELVS+GGWKSDNGTFR GYLAQL RMMAEK+SGC ++ +  IDCRIK +K+TFQAIAE
Subjt:  --TKEEEAYLVEAL---------------------------VELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAE

Query:  MHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVP-GGFEGFSADYGNDTEIPMMYS
        M GP+CSGF WNDE KCI+AE+ELFDNWV+S   AKGLLN PF +YD L YVFG+D ATG  AETF D+GSN P GG++ F    GN+ + P +YS
Subjt:  MHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVP-GGFEGFSADYGNDTEIPMMYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein2.1e-0826.06Show/hide
Query:  GPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAE
        GP  +W  T +E   L+E + +      W+  +G      +         K  GCN +       R+K +K  +Q+  ++   S SGF W+ E K   A 
Subjt:  GPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAE

Query:  RELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARA
         E++ +++K+H   K +  +   H+++L  +FG   ATG+ A
Subjt:  RELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATGARA

AT2G24960.2 unknown protein9.0e-0722.63Show/hide
Query:  RWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERE
        R + F T   + +L++ LVE V+ G       TF +    ++      K    +      +  R K++++ +  I  +     +GF+W+     +IA+ +
Subjt:  RWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERE

Query:  LFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATG
        +++ ++++H  A+    K    Y NLC++FGK+ + G
Subjt:  LFDNWVKSHHTAKGLLNKPFSHYDNLCYVFGKDHATG

AT4G02210.1 unknown protein1.3e-0526.47Show/hide
Query:  RIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFG
        R K++++ F AI  +      GF W++E + + A+  ++ +++K+H  A+  + +P  +Y +LC + G
Subjt:  RIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLLNKPFSHYDNLCYVFG

AT5G28730.1 unknown protein5.8e-0632.97Show/hide
Query:  IHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLK
        I+ +++ C    +M    F  LC +L   +GL S+  I ++E V++FL I A +   R I   F  ++ETI R F+  L A+ RL  E ++
Subjt:  IHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLK

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.4e-1229.66Show/hide
Query:  CHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRL---------HDELLKKPQPVTN
        C ++ +MDK  F+ LC LL+T   L  T  I +E  +++FL I+ H+++ R +Q  F  S ETISRHFN  L AV+ +         + + L+   P   
Subjt:  CHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRL---------HDELLKKPQPVTN

Query:  ACTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLA
         C G           +++ +  +V +   G +++ NG      LA
Subjt:  ACTGPRWKWFQTKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCATGAATCCGACCTAGTATGTCATCAAAGTACTAAAATGGACAAACGATGTTTTTTCATTCTATGCCACCTACTTAGGACGACTTTTGGATTAGCCTCGACGGA
AGTCATCGATGTCGAGGAGATGGTCTCCATGTTCCTACACATAGTCGCGCACGACATGAAGAACCGAGTGATCCAAAGGGAGTTCGTGCGGTCGAGGGAGACAATTTCGC
GACATTTCAATTTGGACTTGTTGGCAGTGGTACGCCTGCATGACGAGTTGTTGAAGAAACCTCAACCAGTGACGAACGCATGCACAGGTCCGAGATGGAAGTGGTTTCAG
ACGAAGGAGGAAGAGGCGTACCTAGTCGAGGCCTTGGTGGAGTTAGTATCTGTTGGCGGCTGGAAGTCAGACAACGGTACCTTTCGTTCGGGGTACCTAGCGCAGCTACA
ACGAATGATGGCGGAGAAGATGTCTGGATGTAATATCCAGGGTTCGCCGACAATTGACTGTCGGATAAAAAACATGAAGAAAACATTCCAGGCCATTGCAGAGATGCATG
GGCCGTCGTGTAGTGGGTTCAATTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCGACAATTGGGTTAAAAGTCACCATACTGCGAAGGGCCTCCTA
AATAAGCCATTTTCCCATTACGACAACCTGTGCTACGTCTTTGGGAAGGATCATGCGACAGGAGCTCGCGCGGAGACATTCATTGACATCGGGTCAAATGTGCCTGGAGG
GTTCGAGGGATTTTCCGCTGATTATGGAAACGATACGGAGATCCCTATGATGTACAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCCATGAATCCGACCTAGTATGTCATCAAAGTACTAAAATGGACAAACGATGTTTTTTCATTCTATGCCACCTACTTAGGACGACTTTTGGATTAGCCTCGACGGA
AGTCATCGATGTCGAGGAGATGGTCTCCATGTTCCTACACATAGTCGCGCACGACATGAAGAACCGAGTGATCCAAAGGGAGTTCGTGCGGTCGAGGGAGACAATTTCGC
GACATTTCAATTTGGACTTGTTGGCAGTGGTACGCCTGCATGACGAGTTGTTGAAGAAACCTCAACCAGTGACGAACGCATGCACAGGTCCGAGATGGAAGTGGTTTCAG
ACGAAGGAGGAAGAGGCGTACCTAGTCGAGGCCTTGGTGGAGTTAGTATCTGTTGGCGGCTGGAAGTCAGACAACGGTACCTTTCGTTCGGGGTACCTAGCGCAGCTACA
ACGAATGATGGCGGAGAAGATGTCTGGATGTAATATCCAGGGTTCGCCGACAATTGACTGTCGGATAAAAAACATGAAGAAAACATTCCAGGCCATTGCAGAGATGCATG
GGCCGTCGTGTAGTGGGTTCAATTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCGACAATTGGGTTAAAAGTCACCATACTGCGAAGGGCCTCCTA
AATAAGCCATTTTCCCATTACGACAACCTGTGCTACGTCTTTGGGAAGGATCATGCGACAGGAGCTCGCGCGGAGACATTCATTGACATCGGGTCAAATGTGCCTGGAGG
GTTCGAGGGATTTTCCGCTGATTATGGAAACGATACGGAGATCCCTATGATGTACAGTTAG
Protein sequenceShow/hide protein sequence
MIHESDLVCHQSTKMDKRCFFILCHLLRTTFGLASTEVIDVEEMVSMFLHIVAHDMKNRVIQREFVRSRETISRHFNLDLLAVVRLHDELLKKPQPVTNACTGPRWKWFQ
TKEEEAYLVEALVELVSVGGWKSDNGTFRSGYLAQLQRMMAEKMSGCNIQGSPTIDCRIKNMKKTFQAIAEMHGPSCSGFNWNDEVKCIIAERELFDNWVKSHHTAKGLL
NKPFSHYDNLCYVFGKDHATGARAETFIDIGSNVPGGFEGFSADYGNDTEIPMMYS