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PI0002959 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002959
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMADS-box transcription factor 8-like
Genome locationchr11:1810555..1814145
RNA-Seq ExpressionPI0002959
SyntenyPI0002959
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039813.1 MADS-box transcription factor 8-like [Cucumis melo var. makuwa]6.2e-2468Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL---------------------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQR
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDHVS+ETIL                           VE+PNFKKLD+TQMVQLENQLEGTLDKIKSQR
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL---------------------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQR

TYK24685.1 MADS-box transcription factor 8-like [Cucumis melo var. makuwa]3.9e-2683.95Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSEETILVEKPNFKKLDVTQMVQLENQLEGTLDKIKSQR
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VS+ETILVE+PNFKKLD+TQMVQLENQLEGTLDKIKSQR
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSEETILVEKPNFKKLDVTQMVQLENQLEGTLDKIKSQR

XP_008459847.1 PREDICTED: MADS-box transcription factor 8-like [Cucumis melo]1.1e-4176.23Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL---------------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIE
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDHVS+ETIL                     VE+PNFKKLD+TQMVQLENQLEGTLDKIKSQRIEAMIE
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL---------------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIE

Query:  NDDCWTYDMDMTMGMINSPPFN
        NDDCWTYDM++ MGMINSPPFN
Subjt:  NDDCWTYDMDMTMGMINSPPFN

XP_011656809.1 MADS-box transcription factor 8 [Cucumis sativus]4.1e-4484.21Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL-------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIENDDCWTYD
        MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVS+ETIL             VE+PNFKKLD+TQMVQLENQLE TLDKIKSQRIEAMIENDDCWTYD
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL-------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIENDDCWTYD

Query:  MDMTMGMINSPPFN
        MDM MGMINSPPFN
Subjt:  MDMTMGMINSPPFN

XP_038907043.1 uncharacterized protein LOC120092871 [Benincasa hispida]3.3e-3368Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDA-----------KDHVSEETIL-------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEA
        MRYQSHLQGRNESPI N LQGTSESLIDNDA           KDH S+ET L             VE+PNFKKLDV+QM+QLENQLEGTLDKIKSQRIEA
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDA-----------KDHVSEETIL-------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEA

Query:  MIENDDCWTYDMDMTMGMINSPPFN
        M+E+D  WTY+MDM MG++NSPPFN
Subjt:  MIENDDCWTYDMDMTMGMINSPPFN

TrEMBL top hitse value%identityAlignment
A0A0A0KFD8 Uncharacterized protein2.0e-4484.21Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL-------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIENDDCWTYD
        MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVS+ETIL             VE+PNFKKLD+TQMVQLENQLE TLDKIKSQRIEAMIENDDCWTYD
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL-------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIENDDCWTYD

Query:  MDMTMGMINSPPFN
        MDM MGMINSPPFN
Subjt:  MDMTMGMINSPPFN

A0A1S3CCC5 MADS-box transcription factor 8-like5.4e-4276.23Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL---------------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIE
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDHVS+ETIL                     VE+PNFKKLD+TQMVQLENQLEGTLDKIKSQRIEAMIE
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL---------------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIE

Query:  NDDCWTYDMDMTMGMINSPPFN
        NDDCWTYDM++ MGMINSPPFN
Subjt:  NDDCWTYDMDMTMGMINSPPFN

A0A5A7T9V4 MADS-box transcription factor 8-like3.0e-2468Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL---------------------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQR
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDHVS+ETIL                           VE+PNFKKLD+TQMVQLENQLEGTLDKIKSQR
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETIL---------------------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQR

A0A5D3DM40 MADS-box transcription factor 8-like1.9e-2683.95Show/hide
Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSEETILVEKPNFKKLDVTQMVQLENQLEGTLDKIKSQR
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VS+ETILVE+PNFKKLD+TQMVQLENQLEGTLDKIKSQR
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSEETILVEKPNFKKLDVTQMVQLENQLEGTLDKIKSQR

A0A6J1DPA0 MADS-box transcription factor 8-like isoform X38.1e-1453.54Show/hide
Query:  RYQSHLQGR--NESPIDNDLQGTSESLIDNDAKDHVSEETIL-------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIENDDCWT
        RYQSHL+G+  ++SPID D   + +        DH S +TIL             VE+P+FKKL+VT+M+QLENQLE TLDKIK QRIEAM+EN DCWT
Subjt:  RYQSHLQGR--NESPIDNDLQGTSESLIDNDAKDHVSEETIL-------------VEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIENDDCWT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTACCAAAGCCACCTTCAAGGGAGAAATGAAAGTCCAATTGACAATGACCTTCAAGGAACAAGTGAAAGTCTAATTGATAATGATGCAAAGGACCATGTATCTGA
AGAGACGATCTTGGTTGAAAAACCAAATTTCAAGAAGCTCGATGTAACTCAGATGGTGCAATTGGAGAATCAACTTGAAGGCACACTTGACAAAATCAAATCTCAAAGAA
TTGAGGCAATGATAGAAAATGATGACTGTTGGACATATGACATGGATATGACTATGGGCATGATCAACAGCCCGCCATTTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCTACCAAAGCCACCTTCAAGGGAGAAATGAAAGTCCAATTGACAATGACCTTCAAGGAACAAGTGAAAGTCTAATTGATAATGATGCAAAGGACCATGTATCTGA
AGAGACGATCTTGGTTGAAAAACCAAATTTCAAGAAGCTCGATGTAACTCAGATGGTGCAATTGGAGAATCAACTTGAAGGCACACTTGACAAAATCAAATCTCAAAGAA
TTGAGGCAATGATAGAAAATGATGACTGTTGGACATATGACATGGATATGACTATGGGCATGATCAACAGCCCGCCATTTAATTAG
Protein sequenceShow/hide protein sequence
MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSEETILVEKPNFKKLDVTQMVQLENQLEGTLDKIKSQRIEAMIENDDCWTYDMDMTMGMINSPPFN