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PI0002972 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002972
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:13984000..13984808
RNA-Seq ExpressionPI0002972
SyntenyPI0002972
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]3.0e-6858.09Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------
        MGDFN IRV  EA+ GS I  +MEEFDLAI +ADLVE S+QGNWFTW SKV GSG L RLDR+LVN+EWL+ WP+++++VLP                  
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------

Query:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS
                   W E+PSF +VV+ +W R  GVS LVS+M+NLH LKP LRR FGRHI+ LS EV  AKEAMD AQREVER+P S  + RQA LATE FW+
Subjt:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS

Query:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL
         + L+EASL QKS++RWL L DQN AFFHRSV     RNSL
Subjt:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL

KAA0059841.1 reverse transcriptase [Cucumis melo var. makuwa]1.0e-6858.51Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------
        MGDFN IRV  EA+ GS I  +ME+FDLAI +ADLVE S+QGNWFTW SKV GSG L RLDR+LVN+ WL+ WP++ V+VLP                  
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------

Query:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS
                   W EDPSF +VV+ +W R  GVSPLVS+M+NLH LKPTLRR FGRHI+ LS EV  AKEAMDRAQR+VER+  S  + RQA LATE FW+
Subjt:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS

Query:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL
         + L+EASL QKS+IRWL+L DQN  FFHRSV     RNSL
Subjt:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.6e-6966.04Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSDVVSWIWVRR
        MGDFN IRV FEA+ GS I  +ME+FDLA  +ADLVE S+QGNWFTW SKV GSG L RLDRILVN+EWL+ WP+L V +    EDPSF +VV+ +W R 
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSDVVSWIWVRR

Query:  LGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWSVIFLQEASLCQKSQIRWLELDDQNFAFFH
         GVSPLVS+M+NL +LKPTLRR FGRHI+ L+ EV  AKE MDRAQREVE +P S  + RQ GLATEAFW+ + L+EASL QKS+IRWLEL DQN AFFH
Subjt:  LGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWSVIFLQEASLCQKSQIRWLELDDQNFAFFH

Query:  RSVVVNFFRNSL
        R V     RNSL
Subjt:  RSVVVNFFRNSL

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]1.0e-6858.51Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------
        MGDFN IRV  EA+ GS I  +ME+FDLAI +ADLVE S+QGNWFTW SKV GSG L RLDR+LVN+ WL+ WP++ V+VLP                  
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------

Query:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS
                   W EDPSF +VV+ +W R  GVSPLVS+M+NLH LKPTLRR FGRHI+ LS EV  AKEAMDRAQR+VER+  S  + RQA LATE FW+
Subjt:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS

Query:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL
         + L+EASL QKS+IRWL+L DQN  FFHRSV     RNSL
Subjt:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL

XP_031740408.1 uncharacterized protein LOC116403413 [Cucumis sativus]9.0e-5745.59Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------
        +GDFN IR+  EA+ G+    DMEEFD+AI EADLVE ++QGNWFTW SK+ GSG + RLDRILVN+E L+ WP+++V+VLP                  
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------

Query:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS
                   W ++ SF DVVS  W +   VSP+V+I++NL +LK  LRRHFGRHIR +S +VR A + MDRA+RE+E +  S +    A LAT  FW 
Subjt:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS

Query:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRS-----------------------------VVVNFFRNSLGS
         + ++EA++ QKS+ RWL+LDDQN AFFHRS                             VVVN+F++SLGS
Subjt:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRS-----------------------------VVVNFFRNSLGS

TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041004.9e-6958.51Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------
        MGDFN IRV  EA+ GS I  +ME+FDLAI +ADLVE S+QGNWFTW SKV GSG L RLDR+LVN+ WL+ WP++ V+VLP                  
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------

Query:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS
                   W EDPSF +VV+ +W R  GVSPLVS+M+NLH LKPTLRR FGRHI+ LS EV  AKEAMDRAQR+VER+  S  + RQA LATE FW+
Subjt:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS

Query:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL
         + L+EASL QKS+IRWL+L DQN  FFHRSV     RNSL
Subjt:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL

A0A5A7TZS0 Reverse transcriptase domain-containing protein1.4e-6858.09Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------
        MGDFN IRV  EA+ GS I  +MEEFDLAI +ADLVE S+QGNWFTW SKV GSG L RLDR+LVN+EWL+ WP+++++VLP                  
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------

Query:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS
                   W E+PSF +VV+ +W R  GVS LVS+M+NLH LKP LRR FGRHI+ LS EV  AKEAMD AQREVER+P S  + RQA LATE FW+
Subjt:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS

Query:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL
         + L+EASL QKS++RWL L DQN AFFHRSV     RNSL
Subjt:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL

A0A5A7V275 Reverse transcriptase4.9e-6958.51Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------
        MGDFN IRV  EA+ GS I  +ME+FDLAI +ADLVE S+QGNWFTW SKV GSG L RLDR+LVN+ WL+ WP++ V+VLP                  
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLP------------------

Query:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS
                   W EDPSF +VV+ +W R  GVSPLVS+M+NLH LKPTLRR FGRHI+ LS EV  AKEAMDRAQR+VER+  S  + RQA LATE FW+
Subjt:  -----------WAEDPSFSDVVSWIWVRRLGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWS

Query:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL
         + L+EASL QKS+IRWL+L DQN  FFHRSV     RNSL
Subjt:  VIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSL

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein7.6e-7066.04Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSDVVSWIWVRR
        MGDFN IRV FEA+ GS I  +ME+FDLA  +ADLVE S+QGNWFTW SKV GSG L RLDRILVN+EWL+ WP+L V +    EDPSF +VV+ +W R 
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSDVVSWIWVRR

Query:  LGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWSVIFLQEASLCQKSQIRWLELDDQNFAFFH
         GVSPLVS+M+NL +LKPTLRR FGRHI+ L+ EV  AKE MDRAQREVE +P S  + RQ GLATEAFW+ + L+EASL QKS+IRWLEL DQN AFFH
Subjt:  LGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWSVIFLQEASLCQKSQIRWLELDDQNFAFFH

Query:  RSVVVNFFRNSL
        R V     RNSL
Subjt:  RSVVVNFFRNSL

A0A5D3DXQ8 Reverse transcriptase domain-containing protein8.2e-5659.61Show/hide
Query:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSDVVSWIWVRR
        MGDFN IRV  EA+ GS I  +ME+FDLAI +ADLVE S+QGNWFTW SK          +R +V+  +             W EDPSF +VVS +W R 
Subjt:  MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSDVVSWIWVRR

Query:  LGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWSVIFLQEASLCQKSQIRWLELDDQNFAFFH
         GVSPLVS+++NL  LK T+RRHFGRHI+ LS EVR AKEAMDRAQREV+R+P S  + RQAGLATEAFW+ + L+EASL QK +IRWLEL +QN AFFH
Subjt:  LGVSPLVSIMQNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWSVIFLQEASLCQKSQIRWLELDDQNFAFFH

Query:  RSV
        RSV
Subjt:  RSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G40390.1 DNAse I-like superfamily protein1.3e-0531.91Show/hide
Query:  MGDFNVIRVPFEAYS---GSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSD
        +GDFN I    E YS    ++    +E+    + ++DLV+   +G  +TW++    +  L +LDR +VN  WLA +P+      P    PS SD
Subjt:  MGDFNVIRVPFEAYS---GSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGACTTTAATGTTATTCGGGTGCCCTTTGAAGCTTATAGTGGGAGTCTGATTTCTAGTGATATGGAGGAGTTTGATCTTGCTATTTGTGAGGCTGACTTAGTTGA
GTCGTCGATTCAGGGTAACTGGTTCACTTGGGCGAGTAAAGTGTGTGGTTCAGGTTGGTTGTGTCGTCTTGATCGTATTTTGGTTAATGAGGAGTGGTTAGCTGTTTGGC
CTAGTTTGCAGGTTTCTGTCCTGCCGTGGGCGGAGGATCCTTCTTTCAGTGATGTAGTGTCTTGGATTTGGGTGAGACGACTGGGTGTTTCTCCGTTAGTGAGTATTATG
CAAAATTTACATGACCTTAAGCCTACCCTTCGTAGACATTTTGGTAGGCATATTAGGGGCCTTAGTAGGGAGGTGCGCACTGCTAAAGAGGCTATGGATAGGGCCCAGCG
TGAGGTTGAGCGAGATCCTGAGTCTGTTAAGGTGTGTCGTCAAGCTGGGCTTGCTACTGAGGCTTTTTGGTCTGTTATTTTTTTGCAAGAAGCCTCTCTTTGTCAGAAAT
CGCAGATTAGGTGGTTGGAGCTTGATGATCAGAATTTCGCCTTCTTCCATCGTTCGGTGGTTGTTAACTTTTTTCGTAACAGTTTGGGATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGACTTTAATGTTATTCGGGTGCCCTTTGAAGCTTATAGTGGGAGTCTGATTTCTAGTGATATGGAGGAGTTTGATCTTGCTATTTGTGAGGCTGACTTAGTTGA
GTCGTCGATTCAGGGTAACTGGTTCACTTGGGCGAGTAAAGTGTGTGGTTCAGGTTGGTTGTGTCGTCTTGATCGTATTTTGGTTAATGAGGAGTGGTTAGCTGTTTGGC
CTAGTTTGCAGGTTTCTGTCCTGCCGTGGGCGGAGGATCCTTCTTTCAGTGATGTAGTGTCTTGGATTTGGGTGAGACGACTGGGTGTTTCTCCGTTAGTGAGTATTATG
CAAAATTTACATGACCTTAAGCCTACCCTTCGTAGACATTTTGGTAGGCATATTAGGGGCCTTAGTAGGGAGGTGCGCACTGCTAAAGAGGCTATGGATAGGGCCCAGCG
TGAGGTTGAGCGAGATCCTGAGTCTGTTAAGGTGTGTCGTCAAGCTGGGCTTGCTACTGAGGCTTTTTGGTCTGTTATTTTTTTGCAAGAAGCCTCTCTTTGTCAGAAAT
CGCAGATTAGGTGGTTGGAGCTTGATGATCAGAATTTCGCCTTCTTCCATCGTTCGGTGGTTGTTAACTTTTTTCGTAACAGTTTGGGATCCTAG
Protein sequenceShow/hide protein sequence
MGDFNVIRVPFEAYSGSLISSDMEEFDLAICEADLVESSIQGNWFTWASKVCGSGWLCRLDRILVNEEWLAVWPSLQVSVLPWAEDPSFSDVVSWIWVRRLGVSPLVSIM
QNLHDLKPTLRRHFGRHIRGLSREVRTAKEAMDRAQREVERDPESVKVCRQAGLATEAFWSVIFLQEASLCQKSQIRWLELDDQNFAFFHRSVVVNFFRNSLGS