; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002976 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002976
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr07:11806560..11807876
RNA-Seq ExpressionPI0002976
SyntenyPI0002976
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032916.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.3e-9846.19Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF    
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPYLDSQP
        L    Y   D+NDP+LD+QP
Subjt:  LASPEY---DLNDPYLDSQP

KAA0032923.1 polyprotein [Cucumis melo var. makuwa]6.7e-9946.43Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPYLDSQP
        L    Y   D+NDP+LD+QP
Subjt:  LASPEY---DLNDPYLDSQP

KAA0050443.1 polyprotein [Cucumis melo var. makuwa]3.3e-9845.56Show/hide
Query:  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVA
        +T SKG    S+Q+ APS MSA+ YAMD  F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S   S+ P  P++YSQ V 
Subjt:  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVA

Query:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTH
        P K F PRP I  YF K  ++ D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++
Subjt:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTH

Query:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV-----
        LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV-----

Query:  -NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP
         N      ++ +S+ + D+L    Y   D+NDP+LD+QP
Subjt:  -NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.3e-9845.95Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPYLDSQP
             Y   D+NDP+LD+QP
Subjt:  LASPEY---DLNDPYLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]1.1e-9846.43Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPYLDSQP
        L    Y   D+NDP+LD+QP
Subjt:  LASPEY---DLNDPYLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein3.2e-9946.43Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPYLDSQP
        L    Y   D+NDP+LD+QP
Subjt:  LASPEY---DLNDPYLDSQP

A0A5A7SS94 Retrotransposable element Tf22.1e-9846.19Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF    
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPYLDSQP
        L    Y   D+NDP+LD+QP
Subjt:  LASPEY---DLNDPYLDSQP

A0A5A7U3G5 Polyprotein1.6e-9845.56Show/hide
Query:  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVA
        +T SKG    S+Q+ APS MSA+ YAMD  F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S   S+ P  P++YSQ V 
Subjt:  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVA

Query:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTH
        P K F PRP I  YF K  ++ D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++
Subjt:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTH

Query:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV-----
        LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV-----

Query:  -NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP
         N      ++ +S+ + D+L    Y   D+NDP+LD+QP
Subjt:  -NASTSSKSASSSIQEDDELASPEY---DLNDPYLDSQP

A0A5A7V6D1 Retrotransposable element Tf22.1e-9845.95Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPYLDSQP
             Y   D+NDP+LD+QP
Subjt:  LASPEY---DLNDPYLDSQP

A0A5D3DW87 Polyprotein5.5e-9946.43Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSKLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPYLDSQP
        L    Y   D+NDP+LD+QP
Subjt:  LASPEY---DLNDPYLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCTACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGC
CCGATAAAAACGATTCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAA
CCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGC
CTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAA
CAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATG
TTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGA
TCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTGCTATCAACGGCAGTAAATG
CCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTACCTCGACTCACAACCTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCTACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGC
CCGATAAAAACGATTCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAA
CCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGC
CTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAA
CAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATG
TTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGA
TCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTGCTATCAACGGCAGTAAATG
CCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTACCTCGACTCACAACCTATGTGA
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSKLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSK
PFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKM
LVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPYLDSQPM