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PI0002979 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002979
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:15945073..15947214
RNA-Seq ExpressionPI0002979
SyntenyPI0002979
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.2e-2780.23Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN
        MAENSQSF NR SELDNSL  EVSELKSQMLNMTT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVN++ KYD P   T N
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN

KAA0056048.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-2679.07Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN
        MAENSQSF NR S+LDNSL  EVSELKSQMLNMTT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVNV+ +YD P   T N
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN

KAA0058150.1 uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa]4.7e-2682.05Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYD
        M ENSQSF NR SELDNSL  EVSELKSQMLNMTT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVN++ +YD
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYD

KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.1e-2677.91Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN
        MAENSQSF NR  ELDNSL  EVSELKSQMLNMTT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVN++ +YD P   T N
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN

KAA0066512.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.6e-2682.05Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYD
        MAENSQSF NR SELDNSL  EVSELKSQMLN+TT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVN++ +YD
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYD

TrEMBL top hitse value%identityAlignment
A0A5A7ULU1 Retrotransposon gag protein1.0e-2679.07Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN
        MAENSQSF NR S+LDNSL  EVSELKSQMLNMTT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVNV+ +YD P   T N
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN

A0A5A7USL5 Retrotrans_gag domain-containing protein2.3e-2682.05Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYD
        M ENSQSF NR SELDNSL  EVSELKSQMLNMTT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVN++ +YD
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYD

A0A5A7V1C6 Retrotransposon gag protein2.9e-2677.91Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN
        MAENSQSF NR  ELDNSL  EVSELKSQMLNMTT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVN++ +YD P   T N
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN

A0A5D3C4I5 Retrotransposon gag protein1.7e-2682.05Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYD
        MAENSQSF NR SELDNSL  EVSELKSQMLN+TT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVN++ +YD
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYD

A0A5D3CRR8 Retrotransposon gag protein1.6e-2780.23Show/hide
Query:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN
        MAENSQSF NR SELDNSL  EVSELKSQMLNMTT LTSFVQG PLKVTKCGVC LVGH NDKCPE+IEDVN++ KYD P   T N
Subjt:  MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGAATTCTCAAAGCTTTAGGAATAGGACATCGGAACTTGACAATTCTCTAAAAACAGAGGTAAGTGAGCTAAAATCTCAAATGTTAAATATGACAACTTTTCT
CACTTCTTTTGTGCAAGGTGGTCCTCTCAAAGTAACCAAATGTGGAGTTTGTGAGTTGGTTGGTCATTCGAATGACAAATGTCCCGAGTTGATTGAGGATGTGAATGTTA
TTGGAAAGTATGACCACCCATGGGATGAAACAACAAATGACTCAACTTACTACCGCCATAAGCAAGTTGGATGGGAAAGGCAAGCTTTCGGCCTAACTGGACCATGCCGA
CGTGAGTGCCATCTCGCTAAGGAGTGGTACAAAAATCTCCCAGTCTCTCTCCTCCCCGCCACACTCCTTCGCCCATCCCATCACCACGCCTTCCTTCTCCACGACTTCCT
TCATCCACCCCTCCACTCAACACCACATCTCCCAACCTCCCCTTACTTGTACCTTTTTCGAGGCGAGCTGATACACTATCGCCTCTCAACCTCTCGCCCATCATTGACCT
TTCCCACCCTCGCAATGACCCACCTACGACCACCACTAAGGCCATTGAGGTACCACTGCCTACCATCTCCCATTAGGCCCCCAACAGTGTTCCCCCAAATTCCTGTTATT
TTCAAAGGGGACGTCAACCAAGATGATGGGGCCACTAGCTGCCCACCACCCAACAAGGATACTAAAGGCCACATTAATGACCCACTCGTCAAGGGAAAATCACCTATCCT
TGACGAAGTTGGTGAGACAACCTCTTCGACGCCAGCCCACAACGTTGCCTCCGTCGCGCCGACTAAACAAGAAAACTTGGGTGATCTACTTAGCTCAATCATTTGCAAGC
CGGTGTTTGATTATTTTGATAAAGTACTGGCTCTGCAAACGAATCACATGGAGCAACTTTACGCATTGAAGAGTTCTGTTGAGAAGTTGAAACGTCCTGCTATCAAAACC
TTAATGACGCCTGCCTCTCAAGAAGATGTGAATATTTTGAGGCGCGAGTTGAAGGACCGTTCGACGAGCCACACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGAATTCTCAAAGCTTTAGGAATAGGACATCGGAACTTGACAATTCTCTAAAAACAGAGGTAAGTGAGCTAAAATCTCAAATGTTAAATATGACAACTTTTCT
CACTTCTTTTGTGCAAGGTGGTCCTCTCAAAGTAACCAAATGTGGAGTTTGTGAGTTGGTTGGTCATTCGAATGACAAATGTCCCGAGTTGATTGAGGATGTGAATGTTA
TTGGAAAGTATGACCACCCATGGGATGAAACAACAAATGACTCAACTTACTACCGCCATAAGCAAGTTGGATGGGAAAGGCAAGCTTTCGGCCTAACTGGACCATGCCGA
CGTGAGTGCCATCTCGCTAAGGAGTGGTACAAAAATCTCCCAGTCTCTCTCCTCCCCGCCACACTCCTTCGCCCATCCCATCACCACGCCTTCCTTCTCCACGACTTCCT
TCATCCACCCCTCCACTCAACACCACATCTCCCAACCTCCCCTTACTTGTACCTTTTTCGAGGCGAGCTGATACACTATCGCCTCTCAACCTCTCGCCCATCATTGACCT
TTCCCACCCTCGCAATGACCCACCTACGACCACCACTAAGGCCATTGAGGTACCACTGCCTACCATCTCCCATTAGGCCCCCAACAGTGTTCCCCCAAATTCCTGTTATT
TTCAAAGGGGACGTCAACCAAGATGATGGGGCCACTAGCTGCCCACCACCCAACAAGGATACTAAAGGCCACATTAATGACCCACTCGTCAAGGGAAAATCACCTATCCT
TGACGAAGTTGGTGAGACAACCTCTTCGACGCCAGCCCACAACGTTGCCTCCGTCGCGCCGACTAAACAAGAAAACTTGGGTGATCTACTTAGCTCAATCATTTGCAAGC
CGGTGTTTGATTATTTTGATAAAGTACTGGCTCTGCAAACGAATCACATGGAGCAACTTTACGCATTGAAGAGTTCTGTTGAGAAGTTGAAACGTCCTGCTATCAAAACC
TTAATGACGCCTGCCTCTCAAGAAGATGTGAATATTTTGAGGCGCGAGTTGAAGGACCGTTCGACGAGCCACACCTAG
Protein sequenceShow/hide protein sequence
MAENSQSFRNRTSELDNSLKTEVSELKSQMLNMTTFLTSFVQGGPLKVTKCGVCELVGHSNDKCPELIEDVNVIGKYDHPWDETTNDSTYYRHKQVGWERQAFGLTGPCR
RECHLAKEWYKNLPVSLLPATLLRPSHHHAFLLHDFLHPPLHSTPHLPTSPYLYLFRGELIHYRLSTSRPSLTFPTLAMTHLRPPLRPLRYHCLPSPIRPPTVFPQIPVI
FKGDVNQDDGATSCPPPNKDTKGHINDPLVKGKSPILDEVGETTSSTPAHNVASVAPTKQENLGDLLSSIICKPVFDYFDKVLALQTNHMEQLYALKSSVEKLKRPAIKT
LMTPASQEDVNILRRELKDRSTSHT