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PI0002988 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002988
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr06:16306797..16307784
RNA-Seq ExpressionPI0002988
SyntenyPI0002988
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.1e-2745.18Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL H NNHLLPGRA GSRW+DQFCVTR  THVVS+YRYMFDLLQRDQ                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  ----------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV
                              R NN RL DV DDPQQVL++CN N+RYMEEIH MYD+ IVPPPV
Subjt:  ----------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.5e-2136.36Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL HVN + L GRA+GSRWRDQFCVTRS THVVS+YRYMFDLLQ  Q                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  ------------------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV
                                                              R NN RL++V DDPQQVL++CN NE+YME IHYMYDVPIVP PV
Subjt:  ------------------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.8e-2039.33Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL HVN + L GRA+GSRWRDQFCVTRS THVVS+YRYMFDLLQ  Q                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  ----------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV
                                          R NN RL +V DD QQVL++CN NE+YME IHYMYDVPIV  PV
Subjt:  ----------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.8e-2237.24Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL H N+HLL GRA GSRWRDQFCV RS T+VV++YRYMFDLLQRDQ                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  -----------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPVPGDVF
                                                       R NN RL DV +DPQQVLD+CN NERYME+IH +YD+PIVPPPV  + F
Subjt:  -----------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPVPGDVF

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-2035.86Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL HVN + L GRA+GSRWRDQFCVTRS THVVS+YRYMFDLLQ  Q                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  ------------------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV
                                                              R NN RL ++ DDPQQVL++CN NE+YME IHYMYDVPIVP PV
Subjt:  ------------------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.0e-2745.18Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL H NNHLLPGRA GSRW+DQFCVTR  THVVS+YRYMFDLLQRDQ                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  ----------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV
                              R NN RL DV DDPQQVL++CN N+RYMEEIH MYD+ IVPPPV
Subjt:  ----------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein3.6e-2136.36Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL HVN + L GRA+GSRWRDQFCVTRS THVVS+YRYMFDLLQ  Q                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  ------------------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV
                                                              R NN RL++V DDPQQVL++CN NE+YME IHYMYDVPIVP PV
Subjt:  ------------------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-2039.33Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL HVN + L GRA+GSRWRDQFCVTRS THVVS+YRYMFDLLQ  Q                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  ----------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV
                                          R NN RL +V DD QQVL++CN NE+YME IHYMYDVPIV  PV
Subjt:  ----------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein8.6e-2337.24Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL H N+HLL GRA GSRWRDQFCV RS T+VV++YRYMFDLLQRDQ                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  -----------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPVPGDVF
                                                       R NN RL DV +DPQQVLD+CN NERYME+IH +YD+PIVPPPV  + F
Subjt:  -----------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPVPGDVF

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-2035.86Show/hide
Query:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------
        +APQL HVN + L GRA+GSRWRDQFCVTRS THVVS+YRYMFDLLQ  Q                                                  
Subjt:  MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQ--------------------------------------------------

Query:  ------------------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV
                                                              R NN RL ++ DDPQQVL++CN NE+YME IHYMYDVPIVP PV
Subjt:  ------------------------------------------------------RLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAACTTAGACATGTAAACAATCATCTACTACCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACCAGATCAACTACTCATGTAGTTAG
TGAGTATAGGTACATGTTTGACCTTCTTCAGCGTGATCAGAGATTAAACAACAGAAGACTTTATGATGTTCCAGATGATCCACAACAAGTCCTTGATTTATGTAATAAGA
ATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTCCAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACC
ATAATGTATAAGAAGTGTCTCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAACTTAGACATGTAAACAATCATCTACTACCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACCAGATCAACTACTCATGTAGTTAG
TGAGTATAGGTACATGTTTGACCTTCTTCAGCGTGATCAGAGATTAAACAACAGAAGACTTTATGATGTTCCAGATGATCCACAACAAGTCCTTGATTTATGTAATAAGA
ATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTCCAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACC
ATAATGTATAAGAAGTGTCTCCAGTGA
Protein sequenceShow/hide protein sequence
MAPQLRHVNNHLLPGRAHGSRWRDQFCVTRSTTHVVSEYRYMFDLLQRDQRLNNRRLYDVPDDPQQVLDLCNKNERYMEEIHYMYDVPIVPPPVPGDVFEWKKLNSMKFT
IMYKKCLQ