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PI0003002 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003002
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionlate embryogenesis abundant protein-like
Genome locationchr01:5912683..5913224
RNA-Seq ExpressionPI0003002
SyntenyPI0003002
Gene Ontology termsGO:0009628 - response to abiotic stimulus (biological process)
GO:1901700 - response to oxygen-containing compound (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033798.1 putative dehydrin LEA [Cucumis melo var. makuwa]8.3e-1687.76Show/hide
Query:  MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQ
        MYGTSVATI LTDKHGNPIQLTDEHNPVVLTDEHGNP WLT + TKVV+
Subjt:  MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQ

KGN43153.1 hypothetical protein Csa_020434 [Cucumis sativus]2.8e-3272.64Show/hide
Query:  MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQQVVQEVAYGDGEQPLQPHEEDEDCGS----------IQFLNYYLSFHFGYV
        MYGTSVAT          I+LTDEHNPVVLTDEHGNP WL+ V TKVVQQVVQEVAYGDGEQPLQPHE+DEDCGS            FLNYYLSFHFGYV
Subjt:  MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQQVVQEVAYGDGEQPLQPHEEDEDCGS----------IQFLNYYLSFHFGYV

Query:  RDQESL
        RDQ+SL
Subjt:  RDQESL

XP_022135876.1 late embryogenesis abundant protein-like [Momordica charantia]2.0e-0951.28Show/hide
Query:  LTDKHGNPIQLTDE-HNPVVLTDEHGNPTWLTGVATKVVQQVVQEV----------AYGDGEQPLQPHEEDEDCGSIQ
        + D+HGNPI+LTDE  NPVVLTDEHGNP  LTGVATK+   +   +           +GDGEQ L PHE  +D G ++
Subjt:  LTDKHGNPIQLTDE-HNPVVLTDEHGNPTWLTGVATKVVQQVVQEV----------AYGDGEQPLQPHEEDEDCGSIQ

XP_038887694.1 late embryogenesis abundant protein-like isoform X1 [Benincasa hispida]2.8e-1151.69Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATKV-----------------------VQQVVQEVAYGDGEQPLQPHEEDEDCGS
        + D+HGNPI+LTDE  NPV+LTDEHGNP WLTGVATKV                         Q      YGD EQ L PHEEDED GS
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATKV-----------------------VQQVVQEVAYGDGEQPLQPHEEDEDCGS

XP_038887695.1 embryogenic cell protein 40-like isoform X2 [Benincasa hispida]4.7e-1141.96Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATKV-----------------------VQQVVQEVAYGDGEQPLQPHEEDEDCGSIQFLNYYLSFH
        + D+HGNPI+LTDE  NPV+LTDEHGNP WLTGVATKV                         Q      YGD EQ L PHEEDED GS        + H
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATKV-----------------------VQQVVQEVAYGDGEQPLQPHEEDEDCGSIQFLNYYLSFH

Query:  FGYVRDQESLSYSLSVSSSDFRFVLV-FALF--ELPMLLSGFD
                SL   L   +      L  F  F  +LP+L SGFD
Subjt:  FGYVRDQESLSYSLSVSSSDFRFVLV-FALF--ELPMLLSGFD

TrEMBL top hitse value%identityAlignment
A0A0A0K124 Uncharacterized protein1.4e-3272.64Show/hide
Query:  MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQQVVQEVAYGDGEQPLQPHEEDEDCGS----------IQFLNYYLSFHFGYV
        MYGTSVAT          I+LTDEHNPVVLTDEHGNP WL+ V TKVVQQVVQEVAYGDGEQPLQPHE+DEDCGS            FLNYYLSFHFGYV
Subjt:  MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQQVVQEVAYGDGEQPLQPHEEDEDCGS----------IQFLNYYLSFHFGYV

Query:  RDQESL
        RDQ+SL
Subjt:  RDQESL

A0A5A7ST54 Putative dehydrin LEA4.0e-1687.76Show/hide
Query:  MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQ
        MYGTSVATI LTDKHGNPIQLTDEHNPVVLTDEHGNP WLT + TKVV+
Subjt:  MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQ

A0A5D2GYD2 Uncharacterized protein1.4e-0845.37Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATK---VVQQVVQEVAYGDG--------EQPLQPHEEDEDCGSIQFLNYYLSFHFGYVRDQESLSY
        L D+HGNPIQLTDEH NPV LTDEHGNP ++TG+ATK       +   + YG G        +Q LQP    +     Q L+Y +S      R   S S 
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATK---VVQQVVQEVAYGDG--------EQPLQPHEEDEDCGSIQFLNYYLSFHFGYVRDQESLSY

Query:  SLSVSSSD
        S S SSSD
Subjt:  SLSVSSSD

A0A5D2LFG0 Uncharacterized protein3.1e-0845.37Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATK---VVQQVVQEVAYGDG--------EQPLQPHEEDEDCGSIQFLNYYLSFHFGYVRDQESLSY
        L D+HGNPIQLTDEH NPV LTDEHGNP ++TG+ATK       +   + YG G        +Q LQP    +     Q L+Y +S   G  + Q S S 
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATK---VVQQVVQEVAYGDG--------EQPLQPHEEDEDCGSIQFLNYYLSFHFGYVRDQESLSY

Query:  SLSVSSSD
        S S SSS+
Subjt:  SLSVSSSD

A0A6J1C1Y9 late embryogenesis abundant protein-like9.6e-1051.28Show/hide
Query:  LTDKHGNPIQLTDE-HNPVVLTDEHGNPTWLTGVATKVVQQVVQEV----------AYGDGEQPLQPHEEDEDCGSIQ
        + D+HGNPI+LTDE  NPVVLTDEHGNP  LTGVATK+   +   +           +GDGEQ L PHE  +D G ++
Subjt:  LTDKHGNPIQLTDE-HNPVVLTDEHGNPTWLTGVATKVVQQVVQEV----------AYGDGEQPLQPHEEDEDCGSIQ

SwissProt top hitse value%identityAlignment
P21298 Late embryogenesis abundant protein3.4e-0457.5Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATKVVQ
        L D+ GNPI LTD + NPV L+DE GNP  +TGVA+   Q
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVATKVVQ

Q07322 Embryogenic cell protein 409.6e-0772.22Show/hide
Query:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVAT
        L D+ GNPIQLTD+H NPV LTDE+GNP  +TGVAT
Subjt:  LTDKHGNPIQLTDEH-NPVVLTDEHGNPTWLTGVAT

Q96261 Probable dehydrin LEA6.9e-0560.98Show/hide
Query:  LTDKHGNPIQLTD-EHNPVV-LTDEHGNPTWLTGVATKVVQ
        L D+ GNPI LTD + NP+V LTDEHGNP +LTGV +   Q
Subjt:  LTDKHGNPIQLTD-EHNPVV-LTDEHGNPTWLTGVATKVVQ

Arabidopsis top hitse value%identityAlignment
AT2G21490.1 dehydrin LEA4.9e-0660.98Show/hide
Query:  LTDKHGNPIQLTD-EHNPVV-LTDEHGNPTWLTGVATKVVQ
        L D+ GNPI LTD + NP+V LTDEHGNP +LTGV +   Q
Subjt:  LTDKHGNPIQLTD-EHNPVV-LTDEHGNPTWLTGVATKVVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGGACGAGCGTGGCAACCATCGGACTCACCGACAAGCATGGCAACCCCATCCAACTCACCGACGAGCACAACCCGGTTGTGCTGACTGATGAACATGGCAACCC
CACGTGGCTCACTGGCGTCGCAACCAAGGTAGTTCAGCAGGTGGTTCAGGAGGTGGCTTATGGCGACGGTGAGCAGCCGTTGCAGCCACATGAGGAGGATGAAGATTGTG
GCTCTATTCAATTTTTGAACTATTACTTGTCGTTTCACTTTGGATATGTTCGGGATCAAGAATCACTTTCGTATTCACTCTCAGTTTCTTCTTCCGATTTTCGCTTTGTT
TTGGTGTTTGCTCTTTTTGAACTTCCAATGCTGCTCTCCGGGTTTGATTCAAATGTTGCAAAGTTTACACTAAACTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGGGACGAGCGTGGCAACCATCGGACTCACCGACAAGCATGGCAACCCCATCCAACTCACCGACGAGCACAACCCGGTTGTGCTGACTGATGAACATGGCAACCC
CACGTGGCTCACTGGCGTCGCAACCAAGGTAGTTCAGCAGGTGGTTCAGGAGGTGGCTTATGGCGACGGTGAGCAGCCGTTGCAGCCACATGAGGAGGATGAAGATTGTG
GCTCTATTCAATTTTTGAACTATTACTTGTCGTTTCACTTTGGATATGTTCGGGATCAAGAATCACTTTCGTATTCACTCTCAGTTTCTTCTTCCGATTTTCGCTTTGTT
TTGGTGTTTGCTCTTTTTGAACTTCCAATGCTGCTCTCCGGGTTTGATTCAAATGTTGCAAAGTTTACACTAAACTTGTGA
Protein sequenceShow/hide protein sequence
MYGTSVATIGLTDKHGNPIQLTDEHNPVVLTDEHGNPTWLTGVATKVVQQVVQEVAYGDGEQPLQPHEEDEDCGSIQFLNYYLSFHFGYVRDQESLSYSLSVSSSDFRFV
LVFALFELPMLLSGFDSNVAKFTLNL