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PI0003008 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003008
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionFormamidopyrimidine-DNA glycosylase
Genome locationchr05:3604814..3606441
RNA-Seq ExpressionPI0003008
SyntenyPI0003008
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048017.1 hypothetical protein E6C27_scaffold385G00850 [Cucumis melo var. makuwa]1.1e-4590.83Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQLTL    KEIPP KLAKATVVS R GTASKLVL CYSKKSISMNWENF+SVRLTSRPFWGIVSSSS NMVLLTGYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

KGN60942.1 hypothetical protein Csa_021351 [Cucumis sativus]5.2e-4589.91Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQLTL    KEIPPRKLAKAT+VS R GTASKLVL  YSKKSIS+NWENFQSVRLTSRPFWGIVSSSS NMVLLTGYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

TYK13803.1 hypothetical protein E5676_scaffold488G00650 [Cucumis melo var. makuwa]5.2e-4589.91Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQLTL    KEIPP KLAKATVVS R GTA KLVL CYSKKSISMNWENF+SVRLTSRPFWGIVSSSS NMVLLTGYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

XP_022999037.1 uncharacterized protein LOC111493548 [Cucurbita maxima]3.4e-3677.98Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQ+      KE+PP KLAK TVV  R GTASK VLSC S KSISMNWEN Q VRLTSRPFWGIVSSSS N+V L GYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEA +DRIT
Subjt:  IEAFIDRIT

XP_038890542.1 uncharacterized protein LOC120080060 [Benincasa hispida]9.6e-3980.73Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MA+FVSLSFSVPQ TL    KEIPPRKL++ TVVSSR GTASKLVLSC S  SISMNW+N   VRLT RPFWGIVSSSS  MVLL+GYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ7 Uncharacterized protein2.5e-4589.91Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQLTL    KEIPPRKLAKAT+VS R GTASKLVL  YSKKSIS+NWENFQSVRLTSRPFWGIVSSSS NMVLLTGYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

A0A5A7U1B8 Uncharacterized protein5.1e-4690.83Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQLTL    KEIPP KLAKATVVS R GTASKLVL CYSKKSISMNWENF+SVRLTSRPFWGIVSSSS NMVLLTGYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

A0A5D3CPK7 Uncharacterized protein2.5e-4589.91Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQLTL    KEIPP KLAKATVVS R GTA KLVL CYSKKSISMNWENF+SVRLTSRPFWGIVSSSS NMVLLTGYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

A0A6J1G3X3 uncharacterized protein LOC1114505621.2e-3476.15Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQ+      KE+PP KLAK TVV  R GTASK VLSC + KSIS NWEN   VRLTSRPFWGIVSSSS N+V L GYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAF+DRIT
Subjt:  IEAFIDRIT

A0A6J1K9Q0 uncharacterized protein LOC1114935481.6e-3677.98Show/hide
Query:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY
        MASFVSLSFSVPQ+      KE+PP KLAK TVV  R GTASK VLSC S KSISMNWEN Q VRLTSRPFWGIVSSSS N+V L GYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEA +DRIT
Subjt:  IEAFIDRIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTCGTTTCTCTGAGCTTCTCCGTTCCACAGCTCACTCTCAAGCATCATCAAAAGGAAATCCCACCACGGAAACTGGCTAAAGCTACAGTAGTTTCAAGCCG
AGTTGGAACAGCTTCGAAGCTTGTGCTATCCTGTTATTCAAAGAAATCCATATCTATGAATTGGGAAAACTTTCAATCTGTACGGTTAACTTCAAGACCTTTTTGGGGCA
TAGTTTCTTCTAGTTCCAGTAATATGGTATTATTAACTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATATAGAAGCTTTTATCGATCGGATTACTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGGCAAAGCGGACCCAAAAGGCTTGGGGGTTTCATAGCTTCGTAGCGTTGCTTTCATGGCGAGCTTCGTTTCTCTGAGCTTCTCCGTTCCACAGCTCACTCTCAAGC
ATCATCAAAAGGAAATCCCACCACGGAAACTGGCTAAAGCTACAGTAGTTTCAAGCCGAGTTGGAACAGCTTCGAAGCTTGTGCTATCCTGTTATTCAAAGAAATCCATA
TCTATGAATTGGGAAAACTTTCAATCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTCCAGTAATATGGTATTATTAACTGGCTACTGGGTAGG
ACCTGATGTTGATGACGGATGGGGATATATAGAAGCTTTTATCGATCGGATTACTTAACTATTCAGACTTTAAATTCCATTTTATGATTTGTTTCTGCTTACTGTGCCTG
ATCTTAGTTGAATCATCATTGTATCCATTAGTCAATAGTCACTTGTTTTCATCAAAATGTCTGAAACTACCTCCTGTTTGTGAAAATTTTATCTTGTTTGATCTGGGAAG
ATAGGTAA
Protein sequenceShow/hide protein sequence
MASFVSLSFSVPQLTLKHHQKEIPPRKLAKATVVSSRVGTASKLVLSCYSKKSISMNWENFQSVRLTSRPFWGIVSSSSSNMVLLTGYWVGPDVDDGWGYIEAFIDRIT