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PI0003016 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003016
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr03:12801645..12802242
RNA-Seq ExpressionPI0003016
SyntenyPI0003016
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025860.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]1.4e-2352.21Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELDE------------------ATVACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKK
        MELWT++G+ + AS + KP++LDLATKE+RRLS+ARV VELD                   A VACG VV+ESFKQL+EGEI+ S  +         G++
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELDE------------------ATVACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKK

Query:  DDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSL
        D+FTLVTRKKRE V VRDR  GKS++ ++ NSF SL
Subjt:  DDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSL

KAA0047412.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]2.2e-2141.94Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATV-----------------------------------------------
        MELWT++G+AV AS + KPL+LDLATKERRRLS+ARVCVELD       E TV                                               
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATV-----------------------------------------------

Query:  --------------ACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSL
                       CG VVLESFKQL++GEI+ SP +  S       K+D+FTLVTRKKRE V +RDR  GKS++ ++ NSFGSL
Subjt:  --------------ACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSL

KAA0060724.1 hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa]7.5e-2241.8Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATVA----------------------------------------------
        MELWT++G+AV ASA+ KP++LDLATKERRRLS+ARVCV+LD       E TV+                                              
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATVA----------------------------------------------

Query:  ---------------CGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSLSDL
                       CG+VVLESFKQL+EGEI+ S  +  S      GK+DDFTLVTRKKRE V VRDR  GKS++ ++ N FGSL ++
Subjt:  ---------------CGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSLSDL

TYK23423.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]2.5e-2550Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD---------------------EATVA--------------CGDVVLESFKQLKEGEIQ
        MELWT++G+AV ASA+ KP++LDLA KERRRLS+AR+CVELD                     E  V+              CG+VVLESFKQL+EGEI+
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD---------------------EATVA--------------CGDVVLESFKQLKEGEIQ

Query:  GSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSLSDL
         SP +  S      GK D+FTLVTRKKRE V VRDR  GKS++ ++ NSFGSL ++
Subjt:  GSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSLSDL

TYK26642.1 uncharacterized protein E5676_scaffold313G002880 [Cucumis melo var. makuwa]5.2e-2347.74Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATVA----------------------------CGDVVLESFKQLKEGEIQ
        MELW ++G+AV ASA+ KP+SLDLATKE RRLS+ARVCVEL        E TV+                            CG+VVLESFKQL+EGEI+
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATVA----------------------------CGDVVLESFKQLKEGEIQ

Query:  GSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQSLQNSFGSLSDL
         SP +  S      GK D+FTLVTRKK + V V+DR K ++   + NSFGSL ++
Subjt:  GSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQSLQNSFGSLSDL

TrEMBL top hitse value%identityAlignment
A0A5A7SI67 DUF4283 domain-containing protein6.6e-2452.21Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELDE------------------ATVACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKK
        MELWT++G+ + AS + KP++LDLATKE+RRLS+ARV VELD                   A VACG VV+ESFKQL+EGEI+ S  +         G++
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELDE------------------ATVACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKK

Query:  DDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSL
        D+FTLVTRKKRE V VRDR  GKS++ ++ NSF SL
Subjt:  DDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSL

A0A5A7TVB8 Putative non-LTR retroelement reverse transcriptase1.1e-2141.94Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATV-----------------------------------------------
        MELWT++G+AV AS + KPL+LDLATKERRRLS+ARVCVELD       E TV                                               
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATV-----------------------------------------------

Query:  --------------ACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSL
                       CG VVLESFKQL++GEI+ SP +  S       K+D+FTLVTRKKRE V +RDR  GKS++ ++ NSFGSL
Subjt:  --------------ACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSL

A0A5A7V084 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein3.6e-2241.8Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATVA----------------------------------------------
        MELWT++G+AV ASA+ KP++LDLATKERRRLS+ARVCV+LD       E TV+                                              
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATVA----------------------------------------------

Query:  ---------------CGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSLSDL
                       CG+VVLESFKQL+EGEI+ S  +  S      GK+DDFTLVTRKKRE V VRDR  GKS++ ++ N FGSL ++
Subjt:  ---------------CGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSLSDL

A0A5D3DIK9 DUF4283 domain-containing protein1.2e-2550Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD---------------------EATVA--------------CGDVVLESFKQLKEGEIQ
        MELWT++G+AV ASA+ KP++LDLA KERRRLS+AR+CVELD                     E  V+              CG+VVLESFKQL+EGEI+
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD---------------------EATVA--------------CGDVVLESFKQLKEGEIQ

Query:  GSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSLSDL
         SP +  S      GK D+FTLVTRKKRE V VRDR  GKS++ ++ NSFGSL ++
Subjt:  GSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQ-SLQNSFGSLSDL

A0A5D3DT40 DUF4283 domain-containing protein2.5e-2347.74Show/hide
Query:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATVA----------------------------CGDVVLESFKQLKEGEIQ
        MELW ++G+AV ASA+ KP+SLDLATKE RRLS+ARVCVEL        E TV+                            CG+VVLESFKQL+EGEI+
Subjt:  MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELD-------EATVA----------------------------CGDVVLESFKQLKEGEIQ

Query:  GSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQSLQNSFGSLSDL
         SP +  S      GK D+FTLVTRKK + V V+DR K ++   + NSFGSL ++
Subjt:  GSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQSLQNSFGSLSDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGTGGACTAAGTCGGGTATTGCAGTTACTGCTAGTGCTATTAGTAAACCTCTTTCTTTAGATTTAGCCACTAAGGAGAGACGTAGACTGTCGTTTGCTCGAGT
GTGTGTTGAATTAGATGAGGCTACTGTGGCTTGTGGGGATGTGGTGTTAGAGTCCTTTAAGCAATTAAAGGAAGGTGAGATTCAGGGTTCTCCGGTTCAAAAGGTGTCAT
CGGCCAATAGCAATTGGGGTAAGAAGGATGATTTCACTCTTGTGACTCGTAAGAAGAGGGAGTCGGTTTTAGTGAGAGATAGAGAGAAAGGGAAGAGTATGCAGTCTCTG
CAGAACTCATTTGGCAGCCTTTCTGATTTGAGTGGGGGAAAATTGGACGTTGGCCTTACGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGTGGACTAAGTCGGGTATTGCAGTTACTGCTAGTGCTATTAGTAAACCTCTTTCTTTAGATTTAGCCACTAAGGAGAGACGTAGACTGTCGTTTGCTCGAGT
GTGTGTTGAATTAGATGAGGCTACTGTGGCTTGTGGGGATGTGGTGTTAGAGTCCTTTAAGCAATTAAAGGAAGGTGAGATTCAGGGTTCTCCGGTTCAAAAGGTGTCAT
CGGCCAATAGCAATTGGGGTAAGAAGGATGATTTCACTCTTGTGACTCGTAAGAAGAGGGAGTCGGTTTTAGTGAGAGATAGAGAGAAAGGGAAGAGTATGCAGTCTCTG
CAGAACTCATTTGGCAGCCTTTCTGATTTGAGTGGGGGAAAATTGGACGTTGGCCTTACGGGTTAG
Protein sequenceShow/hide protein sequence
MELWTKSGIAVTASAISKPLSLDLATKERRRLSFARVCVELDEATVACGDVVLESFKQLKEGEIQGSPVQKVSSANSNWGKKDDFTLVTRKKRESVLVRDREKGKSMQSL
QNSFGSLSDLSGGKLDVGLTG