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PI0003030 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003030
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr08:3578192..3579516
RNA-Seq ExpressionPI0003030
SyntenyPI0003030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047198.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]7.0e-0542.86Show/hide
Query:  YDHHISLLPLAGLHLELPLPGEVKHRR--------AVNSLGIPKEFHNTVWRPRRTHLISLAIAKDIPNQSSDPEGYTHQSGGPKNTPNQS
        Y  H S LPL GL L +PLP  +K ++        A  SL IPK+   ++  P+ T  ISL I  D   QSSDPEG T+QS  P+    QS
Subjt:  YDHHISLLPLAGLHLELPLPGEVKHRR--------AVNSLGIPKEFHNTVWRPRRTHLISLAIAKDIPNQSSDPEGYTHQSGGPKNTPNQS
TrEMBL top hitse value%identityAlignment
A0A5A7TWC4 NBS-LRR type resistance protein3.4e-0542.86Show/hide
Query:  YDHHISLLPLAGLHLELPLPGEVKHRR--------AVNSLGIPKEFHNTVWRPRRTHLISLAIAKDIPNQSSDPEGYTHQSGGPKNTPNQS
        Y  H S LPL GL L +PLP  +K ++        A  SL IPK+   ++  P+ T  ISL I  D   QSSDPEG T+QS  P+    QS
Subjt:  YDHHISLLPLAGLHLELPLPGEVKHRR--------AVNSLGIPKEFHNTVWRPRRTHLISLAIAKDIPNQSSDPEGYTHQSGGPKNTPNQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACAAAAGACATAACCAGTGGCGGAAGCGATAATGACGCCTATGACCATCACATATCCCTCCTGCCCCTCGCAGGTCTGCATCTCGAATTACCTTTGCCTGGAGA
AGTTAAACATAGAAGGGCAGTAAACAGTCTAGGAATCCCGAAGGAGTTCCACAATACAGTCTGGCGGCCTCGAAGGACTCACCTAATCAGTCTGGCGATCGCGAAGGATA
TACCTAATCAGTCTAGTGATCCCGAAGGATACACCCATCAGTCTGGTGGCCCAAAGAACACACCTAATCAGTCTGGGCTGTTTGCGGAAAGAGGGAGCTGCCAACAGAAA
GGGAATTTACTTCGCGGAGTAGCAAGAAACCAAACAGAACGCGGAGAAGAAGCTAGGCGAGAAGAGAGCGGAATACCTCTAACGAACACCTTAGCGAAGGACGCTACGAA
GGCAAGGCTTGGCGAAAGGGGAACCCCACTCCGCACAGCTGGCTATGCAAACAGACCTAGGCAGTCTCAACCAGGCAGCAAGCACTCCGGCAGTACGGATAGGCGGTGTG
GGCTTCGGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACAAAAGACATAACCAGTGGCGGAAGCGATAATGACGCCTATGACCATCACATATCCCTCCTGCCCCTCGCAGGTCTGCATCTCGAATTACCTTTGCCTGGAGA
AGTTAAACATAGAAGGGCAGTAAACAGTCTAGGAATCCCGAAGGAGTTCCACAATACAGTCTGGCGGCCTCGAAGGACTCACCTAATCAGTCTGGCGATCGCGAAGGATA
TACCTAATCAGTCTAGTGATCCCGAAGGATACACCCATCAGTCTGGTGGCCCAAAGAACACACCTAATCAGTCTGGGCTGTTTGCGGAAAGAGGGAGCTGCCAACAGAAA
GGGAATTTACTTCGCGGAGTAGCAAGAAACCAAACAGAACGCGGAGAAGAAGCTAGGCGAGAAGAGAGCGGAATACCTCTAACGAACACCTTAGCGAAGGACGCTACGAA
GGCAAGGCTTGGCGAAAGGGGAACCCCACTCCGCACAGCTGGCTATGCAAACAGACCTAGGCAGTCTCAACCAGGCAGCAAGCACTCCGGCAGTACGGATAGGCGGTGTG
GGCTTCGGCAATGA
Protein sequenceShow/hide protein sequence
MDTKDITSGGSDNDAYDHHISLLPLAGLHLELPLPGEVKHRRAVNSLGIPKEFHNTVWRPRRTHLISLAIAKDIPNQSSDPEGYTHQSGGPKNTPNQSGLFAERGSCQQK
GNLLRGVARNQTERGEEARREESGIPLTNTLAKDATKARLGERGTPLRTAGYANRPRQSQPGSKHSGSTDRRCGLRQ