; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003112 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003112
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:15195798..15199091
RNA-Seq ExpressionPI0003112
SyntenyPI0003112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046553.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.5e-8138.56Show/hide
Query:  EEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPV
        + H +  ER  +  P PN      +D+    D++ E       L++  E  D +I      +E  D  +++H       +   + +   SLIQFGSLEPV
Subjt:  EEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPV

Query:  VIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR-----------------------------------KNFFPE
        VIYSSPE LQ ND RA   KEE K V+N +EGWTLVTRRKK KQ++S+KES  YR Y                                     K+FFP+
Subjt:  VIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR-----------------------------------KNFFPE

Query:  NFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKA-------------
        NFP +IVSCH  STTE+DA P N               + + T + E+L S+ INDLL+L RE+KDTIIEILKNDDVST   S TKA             
Subjt:  NFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKA-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVE
                    PVTKGT+K EQ  IT+KK+ + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPFAE S+NL +   E
Subjt:  -----------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVE

Query:  ILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS
        ILKE+FTTPLTK++KG AK+IEK+ LEA LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSP++   + +   Y I +   GI   S
Subjt:  ILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.9e-9830.68Show/hide
Query:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE
        MT +GNTSKALS+  KRPNTRSRSRE QSSEDMPPF+VAK+IWE++SKPPKGGI+IKEN  ++EH S SERS+E++P PNIMSVMVTDVD  EDRMAELE
Subjt:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE

Query:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNML+KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREY
                                        SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+N +EGWTLVTRRKK+KQ++S+KES  YR Y
Subjt:  --------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREY

Query:  KR-----------------------------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDL
        +                                    K+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDL
Subjt:  KR-----------------------------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDL

Query:  LSLPREIKDTIIEILKNDDVSTIPASQ-------------------------------------------------------------------------
        L+L RE+KDTIIEILKNDDVSTI  S                                                                          
Subjt:  LSLPREIKDTIIEILKNDDVSTIPASQ-------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------TKA----------------
                                                                                         TKA                
Subjt:  ---------------------------------------------------------------------------------TKA----------------

Query:  -------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKE
                PVTKGT+K EQ  IT+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPF E S+NL V   EILKE
Subjt:  -------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKE

Query:  SFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS
        +FT PLTK++KG AK+IEK+ L+A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSP++   + +   Y I +   GI   S
Subjt:  SFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]5.3e-10833.99Show/hide
Query:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE
        MT +GNTSKALS+  KRPNTRSRSRE QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S SER +E++P PNIMSVMVTDVD  EDRMA+LE
Subjt:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE

Query:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNM +K VEERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------------------------SLIQ
                                                                                                        SLIQ
Subjt:  ------------------------------------------------------------------------------------------------SLIQ

Query:  FGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR----------------------------------
        FGSLE +VIYSSPE LQ ND R   PKEE K V+N +EGWTLVTRRKK+KQ++S+KES  YR Y+                                   
Subjt:  FGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR----------------------------------

Query:  -KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKAF-----
         K+FFP+NFP +I SCH  STTE+DA PSN               + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S   A+     
Subjt:  -KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKAF-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------PVTKGTYKPEQGTITTKKSKELNVLKGR
                                                                                PVTKGT+K EQ  IT+KKS + + L  +
Subjt:  ------------------------------------------------------------------------PVTKGTYKPEQGTITTKKSKELNVLKGR

Query:  ENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFD
        +N +  T+TK   P  E IA  +++ S  PVLRYIPLSRRKKGESPFAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ LEA LPE+RT EGF+
Subjt:  ENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFD

Query:  PKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS
        PKAYKLMAKAGYDFTTRTE KS KIFDER  LSP++   + +   Y I +   GI   S
Subjt:  PKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]5.9e-9931.13Show/hide
Query:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE
        MT +GNTSKALS+  KRPNTRSRSRE QSSEDMPPFEVAK+IW+++SKPPKGGI+IKEN  I+EH S SERS+E++P PNIMSVMVTDVD  EDRM  LE
Subjt:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE

Query:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNM +KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR--------------------
                  SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+N +EGWTLVTRRKK+KQ++S+KES  YR Y+                     
Subjt:  ----------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR--------------------

Query:  ---------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVST
                       K+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVST
Subjt:  ---------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVST

Query:  IPASQ-----------------------------------------------------------------------------------------------
        I  S                                                                                                
Subjt:  IPASQ-----------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------TKA-----------------------FPVTKGTYKPEQGTI
                                                                   TKA                        PVTKGT+K EQ  I
Subjt:  -----------------------------------------------------------TKA-----------------------FPVTKGTYKPEQGTI

Query:  TTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESL
        T+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPF E S+NL V   EILKE+FT PLTK++KG AK+IEK+ L
Subjt:  TTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESL

Query:  EACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS
        +A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSP++   + +   Y I +   GI   S
Subjt:  EACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]2.5e-10232.29Show/hide
Query:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE
        M  +GNTSKA S+ +KRPNTRSRSR+ QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S  ERS+E+   PNIMSVMVTDVD  EDRMAELE
Subjt:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE

Query:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNML+KAVEERD+ IA  +NHIESRDAAESSHT T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVE
                                                                      SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+
Subjt:  --------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVE

Query:  NADEGWTLVTRRKKQKQNYSKKESCLYREYKR-----------------------------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEV
        N +EGWTLVTRRKK+KQ++S+KES  YR Y+                                    K+FFP+NFP +IVSCH  STTE+DA PSN    
Subjt:  NADEGWTLVTRRKKQKQNYSKKESCLYREYKR-----------------------------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEV

Query:  NTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQ-------------------------------------------
                   + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S                                            
Subjt:  NTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQ-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------TKA-----------------------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRY
                   TKA                        PVTKGT+K EQ  IT+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRY
Subjt:  -----------TKA-----------------------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRY

Query:  IPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSP
        IPLSRRKKGESPF E S+NL V   EILKE+FT PLTK++KG AK+IEK+ L+A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSP
Subjt:  IPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSP

Query:  SKGSFKSKDILYQIQDQELGISLPS
        ++   + +   Y I +   GI   S
Subjt:  SKGSFKSKDILYQIQDQELGISLPS

TrEMBL top hitse value%identityAlignment
A0A5A7TSN4 Ty3-gypsy retrotransposon protein2.7e-8138.56Show/hide
Query:  EEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPV
        + H +  ER  +  P PN      +D+    D++ E       L++  E  D +I      +E  D  +++H       +   + +   SLIQFGSLEPV
Subjt:  EEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPV

Query:  VIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR-----------------------------------KNFFPE
        VIYSSPE LQ ND RA   KEE K V+N +EGWTLVTRRKK KQ++S+KES  YR Y                                     K+FFP+
Subjt:  VIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR-----------------------------------KNFFPE

Query:  NFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKA-------------
        NFP +IVSCH  STTE+DA P N               + + T + E+L S+ INDLL+L RE+KDTIIEILKNDDVST   S TKA             
Subjt:  NFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKA-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVE
                    PVTKGT+K EQ  IT+KK+ + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPFAE S+NL +   E
Subjt:  -----------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVE

Query:  ILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS
        ILKE+FTTPLTK++KG AK+IEK+ LEA LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSP++   + +   Y I +   GI   S
Subjt:  ILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS

A0A5A7TZU9 Ribonuclease H1.4e-9830.68Show/hide
Query:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE
        MT +GNTSKALS+  KRPNTRSRSRE QSSEDMPPF+VAK+IWE++SKPPKGGI+IKEN  ++EH S SERS+E++P PNIMSVMVTDVD  EDRMAELE
Subjt:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE

Query:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNML+KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREY
                                        SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+N +EGWTLVTRRKK+KQ++S+KES  YR Y
Subjt:  --------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREY

Query:  KR-----------------------------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDL
        +                                    K+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDL
Subjt:  KR-----------------------------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDL

Query:  LSLPREIKDTIIEILKNDDVSTIPASQ-------------------------------------------------------------------------
        L+L RE+KDTIIEILKNDDVSTI  S                                                                          
Subjt:  LSLPREIKDTIIEILKNDDVSTIPASQ-------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------TKA----------------
                                                                                         TKA                
Subjt:  ---------------------------------------------------------------------------------TKA----------------

Query:  -------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKE
                PVTKGT+K EQ  IT+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPF E S+NL V   EILKE
Subjt:  -------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKE

Query:  SFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS
        +FT PLTK++KG AK+IEK+ L+A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSP++   + +   Y I +   GI   S
Subjt:  SFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS

A0A5A7UJR2 Reverse transcriptase2.6e-10833.99Show/hide
Query:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE
        MT +GNTSKALS+  KRPNTRSRSRE QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S SER +E++P PNIMSVMVTDVD  EDRMA+LE
Subjt:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE

Query:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNM +K VEERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------------------------SLIQ
                                                                                                        SLIQ
Subjt:  ------------------------------------------------------------------------------------------------SLIQ

Query:  FGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR----------------------------------
        FGSLE +VIYSSPE LQ ND R   PKEE K V+N +EGWTLVTRRKK+KQ++S+KES  YR Y+                                   
Subjt:  FGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR----------------------------------

Query:  -KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKAF-----
         K+FFP+NFP +I SCH  STTE+DA PSN               + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S   A+     
Subjt:  -KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKAF-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------PVTKGTYKPEQGTITTKKSKELNVLKGR
                                                                                PVTKGT+K EQ  IT+KKS + + L  +
Subjt:  ------------------------------------------------------------------------PVTKGTYKPEQGTITTKKSKELNVLKGR

Query:  ENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFD
        +N +  T+TK   P  E IA  +++ S  PVLRYIPLSRRKKGESPFAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ LEA LPE+RT EGF+
Subjt:  ENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFD

Query:  PKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS
        PKAYKLMAKAGYDFTTRTE KS KIFDER  LSP++   + +   Y I +   GI   S
Subjt:  PKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS

A0A5D3BIH8 Uncharacterized protein2.8e-9931.13Show/hide
Query:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE
        MT +GNTSKALS+  KRPNTRSRSRE QSSEDMPPFEVAK+IW+++SKPPKGGI+IKEN  I+EH S SERS+E++P PNIMSVMVTDVD  EDRM  LE
Subjt:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE

Query:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNM +KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR--------------------
                  SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+N +EGWTLVTRRKK+KQ++S+KES  YR Y+                     
Subjt:  ----------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYKR--------------------

Query:  ---------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVST
                       K+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVST
Subjt:  ---------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVST

Query:  IPASQ-----------------------------------------------------------------------------------------------
        I  S                                                                                                
Subjt:  IPASQ-----------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------TKA-----------------------FPVTKGTYKPEQGTI
                                                                   TKA                        PVTKGT+K EQ  I
Subjt:  -----------------------------------------------------------TKA-----------------------FPVTKGTYKPEQGTI

Query:  TTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESL
        T+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPF E S+NL V   EILKE+FT PLTK++KG AK+IEK+ L
Subjt:  TTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESL

Query:  EACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS
        +A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSP++   + +   Y I +   GI   S
Subjt:  EACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPS

A0A5D3D1E5 Ribonuclease H1.2e-10232.29Show/hide
Query:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE
        M  +GNTSKA S+ +KRPNTRSRSR+ QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S  ERS+E+   PNIMSVMVTDVD  EDRMAELE
Subjt:  MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELE

Query:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNML+KAVEERD+ IA  +NHIESRDAAESSHT T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVE
                                                                      SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+
Subjt:  --------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVE

Query:  NADEGWTLVTRRKKQKQNYSKKESCLYREYKR-----------------------------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEV
        N +EGWTLVTRRKK+KQ++S+KES  YR Y+                                    K+FFP+NFP +IVSCH  STTE+DA PSN    
Subjt:  NADEGWTLVTRRKKQKQNYSKKESCLYREYKR-----------------------------------KNFFPENFPFDIVSCHAVSTTEDDASPSNSPEV

Query:  NTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQ-------------------------------------------
                   + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S                                            
Subjt:  NTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQ-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------TKA-----------------------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRY
                   TKA                        PVTKGT+K EQ  IT+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRY
Subjt:  -----------TKA-----------------------FPVTKGTYKPEQGTITTKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRY

Query:  IPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSP
        IPLSRRKKGESPF E S+NL V   EILKE+FT PLTK++KG AK+IEK+ L+A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSP
Subjt:  IPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSP

Query:  SKGSFKSKDILYQIQDQELGISLPS
        ++   + +   Y I +   GI   S
Subjt:  SKGSFKSKDILYQIQDQELGISLPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTCAAAGGCAACACTTCCAAAGCTCTAAGCAACACCGAAAAGAGGCCAAATACTCGCAGCCGCTCAAGGGAGGCCCAATCGTCTGAGGACATGCCTCCCTTTGA
GGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAAGAAAATTCTGTGATTGAGGAGCACGGTTCGTCTTCTGAACGCTCAAGTG
AGAAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTCGATATGAGAGAAGATAGAATGGCAGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTT
GAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAAT
TTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAG
AAGGAAAGCATGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAACAAAATTACTCTAAAAAAGAGTCTTGCTTGTACCGAGAGTATAAA
AGAAAGAACTTTTTCCCTGAGAACTTTCCATTCGATATTGTTTCGTGCCATGCTGTCAGTACAACCGAAGATGACGCTTCTCCCTCAAATTCACCAGAAGTCAATACAAC
TGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATA
CAATTATCGAGATATTAAAAAATGATGATGTCTCGACTATTCCTGCATCACAGACGAAGGCATTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACA
ACAAAAAAGTCAAAGGAACTGAATGTACTCAAGGGTCGAGAGAATGATAAAATAGCGACCCAAACTAAGTCTGAAGTGCCGACAAAAGAAAGTATAGCGATTCCTCAAGA
AAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAA
TATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAA
GGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTAG
CAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGAGTTGGGTATAAGTCTTCCGAGCCTGTTCGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACATTCAAAGGCAACACTTCCAAAGCTCTAAGCAACACCGAAAAGAGGCCAAATACTCGCAGCCGCTCAAGGGAGGCCCAATCGTCTGAGGACATGCCTCCCTTTGA
GGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAAGAAAATTCTGTGATTGAGGAGCACGGTTCGTCTTCTGAACGCTCAAGTG
AGAAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTCGATATGAGAGAAGATAGAATGGCAGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTT
GAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAAT
TTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAG
AAGGAAAGCATGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAACAAAATTACTCTAAAAAAGAGTCTTGCTTGTACCGAGAGTATAAA
AGAAAGAACTTTTTCCCTGAGAACTTTCCATTCGATATTGTTTCGTGCCATGCTGTCAGTACAACCGAAGATGACGCTTCTCCCTCAAATTCACCAGAAGTCAATACAAC
TGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATA
CAATTATCGAGATATTAAAAAATGATGATGTCTCGACTATTCCTGCATCACAGACGAAGGCATTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACA
ACAAAAAAGTCAAAGGAACTGAATGTACTCAAGGGTCGAGAGAATGATAAAATAGCGACCCAAACTAAGTCTGAAGTGCCGACAAAAGAAAGTATAGCGATTCCTCAAGA
AAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAA
TATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAA
GGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTAG
CAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGAGTTGGGTATAAGTCTTCCGAGCCTGTTCGAATAA
Protein sequenceShow/hide protein sequence
MTFKGNTSKALSNTEKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSERSSEKMPHPNIMSVMVTDVDMREDRMAELEKKVNMLLKAV
EERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESCLYREYK
RKNFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQTKAFPVTKGTYKPEQGTIT
TKKSKELNVLKGRENDKIATQTKSEVPTKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTE
GFDPKAYKLMAKAGYDFTTRTEFKSKIFDERHGLSPSKGSFKSKDILYQIQDQELGISLPSLFE