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PI0003134 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003134
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:10803817..10804516
RNA-Seq ExpressionPI0003134
SyntenyPI0003134
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-4448.53Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG
        M+  ++PG NI A+TID +IK MKR F A++EMRGP+CSGFGWNDE KCI+AEK+++D W +   KG   ++            K       AE+F D+G
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG

Query:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV
        SN PPG+         D + P MYS GL+MSPD++M TR+ R++E R  SSGSKRKR G A ++ +I+R+A+EY N+Q   I EW   QRQDA+ TR E+
Subjt:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV

Query:  VRQL
        VR L
Subjt:  VRQL

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]5.7e-4548.54Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN----RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGD
        M+  ++P  N+ A+TID +IK +KR F AI EMRGP+CSGFGWNDE KCI+AEK+++D WV      KG   ++            K       AE+F D
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN----RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGD

Query:  VGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRA
        VGSN P G+  F     +D +   MYS+GL+MSPDE+MGTR+ R++E R  SSGSK+KR G  +++ +I+R+A+EY N+Q   I EW   QRQDA+ TR 
Subjt:  VGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRA

Query:  EVVRQL
        EVVRQL
Subjt:  EVVRQL

KAA0065737.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-4449.02Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG
        M+T ++PG NI A+TID +IK MKR F A++EMRGP+CSGFGWNDE KCI+AEK+++D W +   KG   ++            K       AE+F D+G
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG

Query:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV
        SN PPG+  F      D + P MYS GL+MSPD++M TR+ R++E R  SS SKRKR G A ++ +I+R+A+EY N+Q   I EW   QRQDA+ TR ++
Subjt:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV

Query:  VRQL
        VRQL
Subjt:  VRQL

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]7.4e-4549.51Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN----RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGD
        M+  ++PG NI A+TID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+L+D WV      KG   ++            K       AE+F D
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN----RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGD

Query:  VGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRA
        +GSN PPG+         D + P MYS GL+MSPD++M TR+ R++E R  SSGSKRKR G A ++ +I+R+A+EY N+Q   I EW   QRQDAS TR 
Subjt:  VGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRA

Query:  EVVRQL
        E+VRQL
Subjt:  EVVRQL

XP_031744343.1 uncharacterized protein LOC116404989 [Cucumis sativus]7.4e-4550.24Show/hide
Query:  MITERMPGHNITATT-IDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVNRKGPPKQTLSPLRRPLLRLR----KRSCNRRSAETFG
        M+  ++PG N+ ATT IDC+IKT+KR++Q I+EMRGPSC GFGWND++KCI+AEK+L+D+WV      K  L+ L      L     K       AETF 
Subjt:  MITERMPGHNITATT-IDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVNRKGPPKQTLSPLRRPLLRLR----KRSCNRRSAETFG

Query:  DVGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTR
        DVGSNVPPGF+EFP  D NDME P+M S   +MS D++   R  R T++R  SSGSKR+R GQ LE A++I+ AM    D+ + I EW +   +D S  R
Subjt:  DVGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTR

Query:  AEVVRQL
         EVVR L
Subjt:  AEVVRQL

TrEMBL top hitse value%identityAlignment
A0A5A7TXU5 Retrotransposon protein1.8e-4448.53Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG
        M+  ++PG NI A+TID +IK MKR F A++EMRGP+CSGFGWNDE KCI+AEK+++D W +   KG   ++            K       AE+F D+G
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG

Query:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV
        SN PPG+         D + P MYS GL+MSPD++M TR+ R++E R  SSGSKRKR G A ++ +I+R+A+EY N+Q   I EW   QRQDA+ TR E+
Subjt:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV

Query:  VRQL
        VR L
Subjt:  VRQL

A0A5A7TZA5 Retrotransposon protein2.8e-4548.54Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN----RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGD
        M+  ++P  N+ A+TID +IK +KR F AI EMRGP+CSGFGWNDE KCI+AEK+++D WV      KG   ++            K       AE+F D
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN----RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGD

Query:  VGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRA
        VGSN P G+  F     +D +   MYS+GL+MSPDE+MGTR+ R++E R  SSGSK+KR G  +++ +I+R+A+EY N+Q   I EW   QRQDA+ TR 
Subjt:  VGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRA

Query:  EVVRQL
        EVVRQL
Subjt:  EVVRQL

A0A5A7VF53 Retrotransposon protein6.1e-4549.02Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG
        M+T ++PG NI A+TID +IK MKR F A++EMRGP+CSGFGWNDE KCI+AEK+++D W +   KG   ++            K       AE+F D+G
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG

Query:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV
        SN PPG+  F      D + P MYS GL+MSPD++M TR+ R++E R  SS SKRKR G A ++ +I+R+A+EY N+Q   I EW   QRQDA+ TR ++
Subjt:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV

Query:  VRQL
        VRQL
Subjt:  VRQL

A0A5D3C1M0 Retrotransposon protein3.6e-4549.51Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN----RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGD
        M+  ++PG NI A+TID +IK MKR F A++EMRGP+CSGFGWNDE KCI+ EK+L+D WV      KG   ++            K       AE+F D
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN----RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGD

Query:  VGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRA
        +GSN PPG+         D + P MYS GL+MSPD++M TR+ R++E R  SSGSKRKR G A ++ +I+R+A+EY N+Q   I EW   QRQDAS TR 
Subjt:  VGSNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRA

Query:  EVVRQL
        E+VRQL
Subjt:  EVVRQL

A0A5D3DPR5 Retrotransposon protein1.8e-4448.53Show/hide
Query:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG
        M+  ++PG NI A+TID +IK MKR F A++EMRGP+CSGFGWNDE KCI+AEK+++D W +   KG   ++            K       AE+F D+G
Subjt:  MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVN--RKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVG

Query:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV
        SN PPG+         D + P MYS GL+MSPD++M TR+ R++E R  SSGSKRKR G A ++ +I+R+A+EY N+Q   I EW   QRQDA+ TR E+
Subjt:  SNVPPGFKEFPHYDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEV

Query:  VRQL
        VR L
Subjt:  VRQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACCGAGAGGATGCCGGGACATAACATAACGGCTACGACAATAGATTGTCAAATCAAGACAATGAAAAGAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATC
ATGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTATGACAGTTGGGTGAACCGCAAAGGGCCTCCTAAACAAACCCTTTCCCCAC
TACGACGACCTTTGCTACGTCTTCGGAAGAGATCGTGCAACAGGAGGTCAGCTGAAACCTTCGGCGATGTTGGGTCGAACGTGCCTCCAGGCTTCAAAGAATTTCCCCAC
TATGACGGAAACGATATGGAGATCCCGACGATGTACAGTCAGGGCTTGGACATGTCACCTGACGAAGTAATGGGTACACGATCGGTTCGTATGACTGAGGCTAGGGCTGG
TTCGAGCGGGTCGAAGAGGAAACGGGAAGGGCAAGCATTGGAGGCGGCAGAAATTATTCGTAGTGCCATGGAATATGCTAATGACCAATTTAAGGCCATTGTAGAATGGC
TCAAAAAACAACGGCAAGATGCCAGCGTGACACGTGCGGAAGTCGTTAGACAACTATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTACCGAGAGGATGCCGGGACATAACATAACGGCTACGACAATAGATTGTCAAATCAAGACAATGAAAAGAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATC
ATGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTATGACAGTTGGGTGAACCGCAAAGGGCCTCCTAAACAAACCCTTTCCCCAC
TACGACGACCTTTGCTACGTCTTCGGAAGAGATCGTGCAACAGGAGGTCAGCTGAAACCTTCGGCGATGTTGGGTCGAACGTGCCTCCAGGCTTCAAAGAATTTCCCCAC
TATGACGGAAACGATATGGAGATCCCGACGATGTACAGTCAGGGCTTGGACATGTCACCTGACGAAGTAATGGGTACACGATCGGTTCGTATGACTGAGGCTAGGGCTGG
TTCGAGCGGGTCGAAGAGGAAACGGGAAGGGCAAGCATTGGAGGCGGCAGAAATTATTCGTAGTGCCATGGAATATGCTAATGACCAATTTAAGGCCATTGTAGAATGGC
TCAAAAAACAACGGCAAGATGCCAGCGTGACACGTGCGGAAGTCGTTAGACAACTATAG
Protein sequenceShow/hide protein sequence
MITERMPGHNITATTIDCQIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSWVNRKGPPKQTLSPLRRPLLRLRKRSCNRRSAETFGDVGSNVPPGFKEFPH
YDGNDMEIPTMYSQGLDMSPDEVMGTRSVRMTEARAGSSGSKRKREGQALEAAEIIRSAMEYANDQFKAIVEWLKKQRQDASVTRAEVVRQL