; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003171 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003171
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:14946803..14947222
RNA-Seq ExpressionPI0003171
SyntenyPI0003171
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]8.7e-3755.63Show/hide
Query:  NVGSVVVPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPS-----ESEDEVTVETSVVASSSSAGR
        N   +  P T+F++PPLNQ+L+Q+TTIKLDR NYLLWKTL LPILK YK+EG+LTG++PCP  F+  ++    +     E +D        +ASSS +  
Subjt:  NVGSVVVPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPS-----ESEDEVTVETSVVASSSSAGR

Query:  RIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
         I+NP F+QW+  DL+LLGWLYNS TPKVAVQLMGF N KDL
Subjt:  RIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

TYK02246.1 uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]2.3e-3760.71Show/hide
Query:  MANVGSVV-VPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRI
        MAN  S+V   TTNFS+PPLNQLL+Q++++KLDRGNYLLWKTL LPI+KSYK EG+LTG+ PCP  FI  + ++  S+SE + T E +  ASS S   + 
Subjt:  MANVGSVV-VPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRI

Query:  VNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
        VNPKFDQW+T  L+LLGW+YNS T +VA QL GFN  KDL
Subjt:  VNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

XP_016901223.1 PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo]6.7e-3760.71Show/hide
Query:  MANVGSVV-VPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRI
        MAN  S+V   TTNFS+PPLNQLL+Q++++KLDR NYLLWKTL LPI+KSYK EGYLTG+ PCP  FI  + + + S+SE + T E +  ASS S   + 
Subjt:  MANVGSVV-VPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRI

Query:  VNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
        VNPKFDQW+T  L+LLGW+YNS T +VA QL GFN  KDL
Subjt:  VNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]7.4e-3657.93Show/hide
Query:  MANVGSVVVP----TTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVE--TSVVASSSS
        MAN      P    +  FS+PPLNQ+L+Q+TT+KLDR NYLLWKTL LPILK YK+EG+LT + PCPS F++     S S S   VT E   + + +SSS
Subjt:  MANVGSVVVP----TTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVE--TSVVASSSS

Query:  AGRRIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
           RIVNP F+QWVT DL+LLGWLYNS TP VA+QLMGF N +DL
Subjt:  AGRRIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]7.4e-3657.93Show/hide
Query:  MANVGSVVVP----TTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVE--TSVVASSSS
        MAN      P    +  FS+PPLNQ+L+Q+TT+KLDR NYLLWKTL LPILK YK+EG+LT + PCPS F++     S S S   VT E   + + +SSS
Subjt:  MANVGSVVVP----TTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVE--TSVVASSSS

Query:  AGRRIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
           RIVNP F+QWVT DL+LLGWLYNS TP VA+QLMGF N +DL
Subjt:  AGRRIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

TrEMBL top hitse value%identityAlignment
A0A1S4DZ26 uncharacterized protein LOC1079912023.2e-3760.71Show/hide
Query:  MANVGSVV-VPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRI
        MAN  S+V   TTNFS+PPLNQLL+Q++++KLDR NYLLWKTL LPI+KSYK EGYLTG+ PCP  FI  + + + S+SE + T E +  ASS S   + 
Subjt:  MANVGSVV-VPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRI

Query:  VNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
        VNPKFDQW+T  L+LLGW+YNS T +VA QL GFN  KDL
Subjt:  VNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X13.6e-3657.93Show/hide
Query:  MANVGSVVVP----TTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVE--TSVVASSSS
        MAN      P    +  FS+PPLNQ+L+Q+TT+KLDR NYLLWKTL LPILK YK+EG+LT + PCPS F++     S S S   VT E   + + +SSS
Subjt:  MANVGSVVVP----TTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVE--TSVVASSSS

Query:  AGRRIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
           RIVNP F+QWVT DL+LLGWLYNS TP VA+QLMGF N +DL
Subjt:  AGRRIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X43.6e-3657.93Show/hide
Query:  MANVGSVVVP----TTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVE--TSVVASSSS
        MAN      P    +  FS+PPLNQ+L+Q+TT+KLDR NYLLWKTL LPILK YK+EG+LT + PCPS F++     S S S   VT E   + + +SSS
Subjt:  MANVGSVVVP----TTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVE--TSVVASSSS

Query:  AGRRIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
           RIVNP F+QWVT DL+LLGWLYNS TP VA+QLMGF N +DL
Subjt:  AGRRIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase4.2e-3755.63Show/hide
Query:  NVGSVVVPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPS-----ESEDEVTVETSVVASSSSAGR
        N   +  P T+F++PPLNQ+L+Q+TTIKLDR NYLLWKTL LPILK YK+EG+LTG++PCP  F+  ++    +     E +D        +ASSS +  
Subjt:  NVGSVVVPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPS-----ESEDEVTVETSVVASSSSAGR

Query:  RIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
         I+NP F+QW+  DL+LLGWLYNS TPKVAVQLMGF N KDL
Subjt:  RIVNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

A0A5D3BVJ1 Uncharacterized protein1.1e-3760.71Show/hide
Query:  MANVGSVV-VPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRI
        MAN  S+V   TTNFS+PPLNQLL+Q++++KLDRGNYLLWKTL LPI+KSYK EG+LTG+ PCP  FI  + ++  S+SE + T E +  ASS S   + 
Subjt:  MANVGSVV-VPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRI

Query:  VNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL
        VNPKFDQW+T  L+LLGW+YNS T +VA QL GFN  KDL
Subjt:  VNPKFDQWVTIDLMLLGWLYNSKTPKVAVQLMGFNNDKDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGTCGGATCAGTAGTAGTTCCTACCACGAATTTCAGTAGTCCACCGCTAAATCAATTGCTAAGTCAGATTACTACAATAAAACTGGATCGAGGTAATTATCT
ATTATGGAAAACCTTAACTCTTCCAATTCTTAAGAGTTATAAAATTGAGGGATATCTTACTGGAGATGAACCATGTCCTTCAACATTTATTATGCAATCGGCTAGAGTCT
CCCCTAGTGAATCTGAAGATGAAGTTACTGTAGAAACAAGTGTAGTAGCTTCTTCAAGCTCTGCTGGGAGGCGTATTGTGAACCCAAAGTTTGATCAATGGGTAACAATA
GATCTAATGTTGCTTGGTTGGCTCTATAATTCCAAGACACCTAAGGTAGCTGTGCAGTTAATGGGATTCAACAATGACAAAGATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGTCGGATCAGTAGTAGTTCCTACCACGAATTTCAGTAGTCCACCGCTAAATCAATTGCTAAGTCAGATTACTACAATAAAACTGGATCGAGGTAATTATCT
ATTATGGAAAACCTTAACTCTTCCAATTCTTAAGAGTTATAAAATTGAGGGATATCTTACTGGAGATGAACCATGTCCTTCAACATTTATTATGCAATCGGCTAGAGTCT
CCCCTAGTGAATCTGAAGATGAAGTTACTGTAGAAACAAGTGTAGTAGCTTCTTCAAGCTCTGCTGGGAGGCGTATTGTGAACCCAAAGTTTGATCAATGGGTAACAATA
GATCTAATGTTGCTTGGTTGGCTCTATAATTCCAAGACACCTAAGGTAGCTGTGCAGTTAATGGGATTCAACAATGACAAAGATCTTTAG
Protein sequenceShow/hide protein sequence
MANVGSVVVPTTNFSSPPLNQLLSQITTIKLDRGNYLLWKTLTLPILKSYKIEGYLTGDEPCPSTFIMQSARVSPSESEDEVTVETSVVASSSSAGRRIVNPKFDQWVTI
DLMLLGWLYNSKTPKVAVQLMGFNNDKDL