; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003172 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003172
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationchr11:28652570..28655986
RNA-Seq ExpressionPI0003172
SyntenyPI0003172
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsIPR013260 - mRNA splicing factor SYF2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010847.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-16494.6Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCFKVIAEVKAR+Q+NEPVPTSSE VQAGR SGSS+FVPPDEYEDL DEKP+EEGHSDGD DKFSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_008457705.1 PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo]1.3e-16897.14Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSE VQAGR SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_011649295.1 pre-mRNA-splicing factor syf2 [Cucumis sativus]6.7e-17098.1Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIAE+KARSQKNEPVPTSSE VQAGR SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022943827.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata]1.5e-16494.6Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCFKVIAEVKAR+Q+NEPVPTSSE VQAGR SGSS+FVPPDEYEDL DEKP+EEGHSDGD DKFSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_038900868.1 pre-mRNA-splicing factor syf2 [Benincasa hispida]5.7e-16997.45Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGRSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLT
        MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPT SEAVQAG SGSS+FVPPDEYEDLHDEKPD EGHSDGD+DKFSGEENVEGDFTKLT
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGRSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLT

Query:  GRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTL
        GRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTL
Subjt:  GRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTL

Query:  YNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTL
        YNAYKKRTKNVN+DLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTL
Subjt:  YNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTL

Query:  EIKNNLERGTALPD
        EIKNNLERGTALPD
Subjt:  EIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF23.3e-17098.1Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIAE+KARSQKNEPVPTSSE VQAGR SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A1S3C6T5 Pre-mRNA-splicing factor SYF26.2e-16997.14Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSE VQAGR SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A5A7TRR3 Pre-mRNA-splicing factor SYF26.2e-16997.14Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSE VQAGR SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVNIDLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1FXE9 Pre-mRNA-splicing factor SYF27.1e-16594.6Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCFKVIAEVKAR+Q+NEPVPTSSE VQAGR SGSS+FVPPDEYEDL DEKP+EEGHSDGD DKFSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLE+YNKMKE+DPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF21.6e-16494.29Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCFKVIAEVKAR+Q+NEPVPTSSE VQAGR SGSS+FVPPDEYEDL DEKP+EEGHSDGD DKFSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGR-SGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKL

Query:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLE+YNKMK++DPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
Q28G05 Pre-mRNA-splicing factor syf22.8e-2538.36Show/hide
Query:  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAEAKYKKWEKDPAPYGWD
        K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAEAKYKKWEKDPAPYGWD

Query:  VFNQKTLYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+E+Y   K+   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q4QRB2 Pre-mRNA-splicing factor SYF28.9e-2438.6Show/hide
Query:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAEAKYKKWEKDPAPYGWDVFNQK
        R +K  E+ LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAEAKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNIDLEDYNKMKETDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNIDLEDYNKMKETDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q6DGP2 Pre-mRNA-splicing factor syf26.8e-2437.67Show/hide
Query:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE---SRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQK
        R +K  E+  K NEARK N   +  E K+++ PS     +   + + L D+KKK          D  K   +  ++A   + KK +++P P G+  + + 
Subjt:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE---SRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNIDLEDYNKMK-ETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y++ TK +  D+E+Y K K E   +F+  ++SL YG     S+D I+ MV +++ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNIDLEDYNKMK-ETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf29.5e-2638.81Show/hide
Query:  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAEAKYKKWEKDPAPYGWD
        K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAEAKYKKWEKDPAPYGWD

Query:  VFNQKTLYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+E+Y   KE   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF28.9e-2438.6Show/hide
Query:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAEAKYKKWEKDPAPYGWDVFNQK
        R +K  E+ LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAEAKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNIDLEDYNKMKETDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNIDLEDYNKMKETDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein3.5e-11669.11Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGRSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLT
        M  E RVHPDC NASNPYHEC EYCFK IAE KAR +K              ++   + V     E L D++ +E+   + + ++ + E  V  D T+LT
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGRSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLT

Query:  GRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTL
        GR+KKLFE+RLKMNEARK+NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAE+KYKKWEK+P P GWDVFNQKTL
Subjt:  GRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTL

Query:  YNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTL
        YNAYKKRTKN+ +DLE+YN+M+  DPEFYREASSLQYGKAPK S+DKID M KEL DR++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+YTL
Subjt:  YNAYKKRTKNVNIDLEDYNKMKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTL

Query:  EIKNNLERGTALPD
        EIKNNLERGTALPD
Subjt:  EIKNNLERGTALPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTGAAGTCAAAGCCCGGAGTCA
GAAAAACGAGCCAGTTCCCACTTCATCAGAAGCTGTACAAGCTGGTCGAAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTG
ACGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAAATGTGGAAGGCGACTTCACAAAACTCACGGGGAGGAAAAAGAAATTGTTTGAAATTAGG
CTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATTGCTGCTGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGA
GGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAGGCCAAATATAAGAAATGGG
AGAAGGATCCAGCACCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTATAATGCATACAAGAAGAGGACGAAGAATGTAAATATTGACCTTGAGGACTATAATAAA
ATGAAAGAAACTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAAGA
CCGAGATGAGAAGCGAAAGTCATTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGG
CCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA
mRNA sequenceShow/hide mRNA sequence
AATTATTAATATTTTTGGGAGGGATCTTGTGCAATTCTTCTCCCTTCTTCCCAAAACGCGAAGAGGAATCTGTTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTC
TTCTTCTTCTTCGTGTTCTAACCCAAGCGGAAAAACTTAGGTTTCAGTGTATTATTGGAGTAAGATAAGTTGTTGCAGAGATGTCTGATGAAGGAAGAGTACACCCTGAT
TGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTGAAGTCAAAGCCCGGAGTCAGAAAAACGAGCCAGTTCCCACTTCATCAGA
AGCTGTACAAGCTGGTCGAAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGACGAAGAAGGGCACAGTGATGGTGATCTTG
ACAAATTTAGTGGCGAGGAAAATGTGGAAGGCGACTTCACAAAACTCACGGGGAGGAAAAAGAAATTGTTTGAAATTAGGCTTAAGATGAATGAGGCTCGGAAAGCTAAT
CAAACAGCAATTGCTGCTGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTT
GGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAGGCCAAATATAAGAAATGGGAGAAGGATCCAGCACCCTATGGATGGGATG
TCTTTAACCAGAAAACATTGTATAATGCATACAAGAAGAGGACGAAGAATGTAAATATTGACCTTGAGGACTATAATAAAATGAAAGAAACTGATCCTGAGTTCTACCGT
GAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCATTTAGCCG
TAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAA
ACAATCTTGAGCGAGGAACTGCATTACCTGATTAAGGATTTTCGAGGAAGATCGGACTTCTAGTAGTTGGGAGTATTTAAAGCTTTCCTCCTTTAATTTCGAAAAGAAGT
TATTCTGTAAAAGATTTCTGGCAAAGCTACAGAATTCTCCTTTAAGTGAAGAGAAAATTGTAAGGTCACATGTCTTAGATATGCAATGTACCATGTAGCAATATATTTGA
CAATAGCAACTTACTTTGATTGAGTTTGTTTCATTGTGAATACCTTTGTTTCTTTCAACAACTACGAATTACCCCAAACAAAGGATATCATTTTTTCTTCCCCTCTTCAC
AAATATGGTATAAGAACGAGTAATTTTGACTTACTGATATCAA
Protein sequenceShow/hide protein sequence
MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTSSEAVQAGRSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIR
LKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEDYNK
MKETDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD