; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003176 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003176
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionVQ domain-containing protein
Genome locationchr05:2085224..2085713
RNA-Seq ExpressionPI0003176
SyntenyPI0003176
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063578.1 hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]1.6e-2791.89Show/hide
Query:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGC
        MMIKAS+ALEFRAIVQQLTGFDSN TPTRRRNQKS SDCARTPSS+FHADREMEVLKFSD HM SLLQFDDQGC
Subjt:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGC

KAG6599333.1 hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3667.16Show/hide
Query:  MGKCGENQYTNQSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPS-SIFHADREMEVLKFSDAHME
        MGKCGEN++ +Q   Q+QNPTKVQRKPIKVKYISSPMMIKASNA EFRAIVQQLTGF S++PTRR N K     A+TPS S  HA+ +ME LK SD +M 
Subjt:  MGKCGENQYTNQSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPS-SIFHADREMEVLKFSDAHME

Query:  SLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFFQ
        SLL+FDD+ CF T   +N+L NN MGFQ+SC FQ
Subjt:  SLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFFQ

KGN60779.1 hypothetical protein Csa_019238 [Cucumis sativus]6.6e-5888.49Show/hide
Query:  MGKCGENQYTN----QSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADR-EMEVLKFS-
        MGKCGENQYTN    QSQ QNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQK  SDCARTPS++FHADR EMEVLKFS 
Subjt:  MGKCGENQYTN----QSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADR-EMEVLKFS-

Query:  DAHMESLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFFQ
        D HMESLLQFD QGCF+TQN NNILPNNIM FQSSCFFQ
Subjt:  DAHMESLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFFQ

XP_010102262.1 sigma factor binding protein 1, chloroplastic [Morus notabilis]5.6e-0936.08Show/hide
Query:  GENQYTNQSQIQNQ-NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSN------------TPTRRRNQKSFSDCARTPSSIFHADREMEVL
        G +QY N   +++Q  P+K ++KPIK+KYISSPMM++A+NA EFRAIVQ+LTG +SN            +  R     S SD  +   S F AD   +  
Subjt:  GENQYTNQSQIQNQ-NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSN------------TPTRRRNQKSFSDCARTPSSIFHADREMEVL

Query:  -----------------KFSDAHMESLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFF
                         KFS+ ++  L Q D+ G F      + +  +  GFQSSC F
Subjt:  -----------------KFSDAHMESLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFF

XP_021282108.1 uncharacterized protein LOC110414990 [Herrania umbratica]3.9e-1041.53Show/hide
Query:  QNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGC-FDTQN
        +++NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +S+         +  + A    S FH D      K  D  +    Q D     FD   
Subjt:  QNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGC-FDTQN

Query:  TNNILPNNIMGFQSSCFF
            +P N+ GFQS   F
Subjt:  TNNILPNNIMGFQSSCFF

TrEMBL top hitse value%identityAlignment
A0A0A0LIA7 VQ domain-containing protein3.2e-5888.49Show/hide
Query:  MGKCGENQYTN----QSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADR-EMEVLKFS-
        MGKCGENQYTN    QSQ QNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQK  SDCARTPS++FHADR EMEVLKFS 
Subjt:  MGKCGENQYTN----QSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADR-EMEVLKFS-

Query:  DAHMESLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFFQ
        D HMESLLQFD QGCF+TQN NNILPNNIM FQSSCFFQ
Subjt:  DAHMESLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFFQ

A0A1R3HNT0 VQ motif-containing protein5.2e-0836.36Show/hide
Query:  MGKCGENQYTNQSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFH---ADREMEVLKFSDAH
        MGK     + +   ++++NPTKV++ PIKV YI SP M+K SNA EFRAIVQ+LTG +S+T  +  N    +   +  ++  H   A  +  +L  S   
Subjt:  MGKCGENQYTNQSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFH---ADREMEVLKFSDAH

Query:  MESLLQFDDQGCFDTQNTNNILPNNIMGFQSS
          S L+FD+        T   +  +++GFQSS
Subjt:  MESLLQFDDQGCFDTQNTNNILPNNIMGFQSS

A0A5A7V7M1 VQ domain-containing protein7.7e-2891.89Show/hide
Query:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGC
        MMIKAS+ALEFRAIVQQLTGFDSN TPTRRRNQKS SDCARTPSS+FHADREMEVLKFSD HM SLLQFDDQGC
Subjt:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGC

A0A6J1A533 uncharacterized protein LOC1104149901.9e-1041.53Show/hide
Query:  QNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGC-FDTQN
        +++NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +S+         +  + A    S FH D      K  D  +    Q D     FD   
Subjt:  QNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGC-FDTQN

Query:  TNNILPNNIMGFQSSCFF
            +P N+ GFQS   F
Subjt:  TNNILPNNIMGFQSSCFF

W9RT96 VQ domain-containing protein2.7e-0936.08Show/hide
Query:  GENQYTNQSQIQNQ-NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSN------------TPTRRRNQKSFSDCARTPSSIFHADREMEVL
        G +QY N   +++Q  P+K ++KPIK+KYISSPMM++A+NA EFRAIVQ+LTG +SN            +  R     S SD  +   S F AD   +  
Subjt:  GENQYTNQSQIQNQ-NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSN------------TPTRRRNQKSFSDCARTPSSIFHADREMEVL

Query:  -----------------KFSDAHMESLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFF
                         KFS+ ++  L Q D+ G F      + +  +  GFQSSC F
Subjt:  -----------------KFSDAHMESLLQFDDQGCFDTQNTNNILPNNIMGFQSSCFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGTGTGGAGAGAATCAATACACCAACCAAAGCCAAATCCAAAACCAAAACCCTACAAAAGTTCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAAT
GATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCTTCGACTCCAACACTCCGACTCGCCGGAGGAACCAGAAATCATTCTCCGACT
GCGCCCGAACTCCATCTTCAATTTTTCATGCAGATCGTGAAATGGAAGTTTTGAAGTTCTCAGATGCTCACATGGAGTCGCTCCTCCAATTTGATGATCAAGGTTGTTTT
GACACACAAAATACTAACAATATTCTTCCCAACAACATTATGGGATTTCAATCTTCTTGTTTTTTTCAATAG
mRNA sequenceShow/hide mRNA sequence
CAAAATCTCTCTCTAACTCTCTCTAATGGGGAAGTGTGGAGAGAATCAATACACCAACCAAAGCCAAATCCAAAACCAAAACCCTACAAAAGTTCAAAGAAAACCCATAA
AAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCTTCGACTCCAACACTCCGACTCGCCGG
AGGAACCAGAAATCATTCTCCGACTGCGCCCGAACTCCATCTTCAATTTTTCATGCAGATCGTGAAATGGAAGTTTTGAAGTTCTCAGATGCTCACATGGAGTCGCTCCT
CCAATTTGATGATCAAGGTTGTTTTGACACACAAAATACTAACAATATTCTTCCCAACAACATTATGGGATTTCAATCTTCTTGTTTTTTTCAATAGATTATATTTAAGG
TTGTCTCTTTTTGTTGGTCTGGTTGGGAATTCAAGTATATATATGCAAAA
Protein sequenceShow/hide protein sequence
MGKCGENQYTNQSQIQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKSFSDCARTPSSIFHADREMEVLKFSDAHMESLLQFDDQGCF
DTQNTNNILPNNIMGFQSSCFFQ