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PI0003183 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003183
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr08:11994649..11998865
RNA-Seq ExpressionPI0003183
SyntenyPI0003183
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]7.7e-0970.49Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
        +TTLLNELQTF SLMK KGQK GEANVA S ++F +GS+SGTKS P SSG+K  +KKKGG+
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-0870.49Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
        +TTLLNELQTF SLMK KGQK GEANVA S ++F +GS+SGTKS P SSG K  +KKKGG+
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
KAA0046844.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-0855.42Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK---------RKGESCKIADSIC
        +TTLLNELQTF SLMK KGQK GEANVA S ++F +GS+SGTK  P SSG K  +KKKGG+         +  +  K+A  IC
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK---------RKGESCKIADSIC
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-0870.49Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
        +TTLLNELQTF SLMK KGQK GEANVA S ++F +GS+SGTKS P SSG K  +KKKGG+
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
KAA0058447.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-0972.13Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
        +TTLLNELQTF SLMK KGQK GEANVA S ++F KGS+SGTKS P SSG K ++KKKGG+
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.8e-0970.49Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
        +TTLLNELQTF SLMK KGQK GEANVA S ++F +GS+SGTKS P SSG K  +KKKGG+
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
A0A5A7SMN4 Gag/pol protein3.7e-0970.49Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
        +TTLLNELQTF SLMK KGQK GEANVA S ++F +GS+SGTKS P SSG+K  +KKKGG+
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
A0A5A7UUN7 Gag/pol protein5.7e-1072.13Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
        +TTLLNELQTF SLMK KGQK GEANVA S ++F KGS+SGTKS P SSG K ++KKKGG+
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
A0A5D3C269 Gag/pol protein4.8e-0955.42Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK---------RKGESCKIADSIC
        +TTLLNELQTF SLMK KGQK GEANVA S ++F +GS+SGTK  P SSG K  +KKKGG+         +  +  K+A  IC
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK---------RKGESCKIADSIC
A0A5D3CPJ6 Gag/pol protein4.8e-0970.49Show/hide
Query:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
        +TTLLNELQTF SLMK KGQK GEANVA S ++F +GS+SGTKS P SSG K  +KKKGG+
Subjt:  MTTLLNELQTFHSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPLSSGTKNIQKKKGGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCCTCCTTAACGAGTTGCAGACTTTTCACTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCATTCCAAGAGGTTTCAGAAGGGTTC
ATCCTCTGGAACCAAGTCTGCACCTTTATCTTCTGGGACTAAGAATATCCAAAAGAAGAAAGGAGGAAAGAGGAAAGGTGAGAGTTGTAAGATTGCCGACTCAATATGCT
TATCATTTTGGGAAAAGACTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACCCTCCTTAACGAGTTGCAGACTTTTCACTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCATTCCAAGAGGTTTCAGAAGGGTTC
ATCCTCTGGAACCAAGTCTGCACCTTTATCTTCTGGGACTAAGAATATCCAAAAGAAGAAAGGAGGAAAGAGGAAAGGTGAGAGTTGTAAGATTGCCGACTCAATATGCT
TATCATTTTGGGAAAAGACTGAGTGA
Protein sequenceShow/hide protein sequence
MTTLLNELQTFHSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPLSSGTKNIQKKKGGKRKGESCKIADSICLSFWEKTE