; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003217 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003217
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr02:10779058..10780097
RNA-Seq ExpressionPI0003217
SyntenyPI0003217
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEW24303.1 putative retrotransposon Gag domain, aspartic peptidase domain protein [Tanacetum cinerariifolium]3.1e-2137.1Show/hide
Query:  SKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIG
        S  D E+   G+N    G++ ++  I   T  P   K  G+GL +++ T+N   V+ ++DSGATHNF+   E ERLG    KGS  TIK VN+ A  I G
Subjt:  SKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIG

Query:  TAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSN--MVNLQCMEKVSQPTITAMQLQKQRRKKK
         A  V+ K+GEW+G +  +++P+D  K+VLGL+FLDK  A    + N+L +       MV+ +   K    T+ A+Q +K   K +
Subjt:  TAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSN--MVNLQCMEKVSQPTITAMQLQKQRRKKK

KAA0035961.1 uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa]2.5e-2351.38Show/hide
Query:  SPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLG
        S  SK+P+  GLL++D T NNK+   M+D+GATHN MDP+E +RLG +  + S+  IK+++ K+M  IG A  VKT+VG WQGKL+F I  LD  KI+LG
Subjt:  SPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLG

Query:  LDFLDKSYA
        LDF+D +++
Subjt:  LDFLDKSYA

KAE8637433.1 hypothetical protein CSA_004611, partial [Cucumis sativus]1.1e-2637.5Show/hide
Query:  KDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTA
        K +EE+V    E + G +   + +  M   P SK+P G+GLL++D TLNN++   ++D+GAT N +D +E +RLG K+ +  +  +K++N +     G A
Subjt:  KDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTA

Query:  WSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSNMVNLQCMEKVSQPTITAMQLQKQRRKKKSRNGDVAKMA
        W+VK K+GEW+GK+ F + PLD  K+VLGLDF+ +++A + +    L+       V L+C+    +  I AMQ  ++ RK K  NG VA  A
Subjt:  WSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSNMVNLQCMEKVSQPTITAMQLQKQRRKKKSRNGDVAKMA

KAE8646814.1 hypothetical protein Csa_005402 [Cucumis sativus]1.1e-2637.5Show/hide
Query:  KDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTA
        K +EE+V    E + G +   + +  M   P SK+P G+GLL++D TLNN++   ++D+GAT N +D +E +RLG K+ +  +  +K++N +     G A
Subjt:  KDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTA

Query:  WSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSNMVNLQCMEKVSQPTITAMQLQKQRRKKKSRNGDVAKMA
        W+VK K+GEW+GK+ F + PLD  K+VLGLDF+ +++A + +    L+       V L+C+    +  I AMQ  ++ RK K  NG VA  A
Subjt:  WSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSNMVNLQCMEKVSQPTITAMQLQKQRRKKKSRNGDVAKMA

QCS14309.1 hypothetical protein [Phalaenopsis equestris]1.8e-2133.54Show/hide
Query:  LNTMIRENFSKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVV
        LN+++  +  + D+E  +E +          +  + ++       KP G+GLLF+++T+  K+   MI++G +HNF+   E +RLG ++ KG   +IKV+
Subjt:  LNTMIRENFSKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVV

Query:  NTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPS
        N+  M+I G A  VKT +G W G + F+++PLD +K+VLG++FL+++ A   S+ N+L + + S
Subjt:  NTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPS

TrEMBL top hitse value%identityAlignment
A0A087PJF6 Reverse transcriptase domain-containing protein1.7e-2035.36Show/hide
Query:  KEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWS
        KE+K E  N+   G + ++  I   TT P  K   G G LF+DV   +K  +V++D+GATHNFM  +E  RLG +V K    ++K VN+ A  I+G A +
Subjt:  KEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWS

Query:  VKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSN---MVNLQCMEKVSQPTITAMQLQKQRRK
        V+  +G W+GK+ FTI+ +D + +V+GL+F+DK  A    + N   +        +V L+   K     ++A+Q  K  +K
Subjt:  VKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSN---MVNLQCMEKVSQPTITAMQLQKQRRK

A0A438DTG9 Reverse transcriptase4.8e-2029.78Show/hide
Query:  RKKALNALIESRRVLQGEEEPNAQICSLQLLNTMIRENFSKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDS
        ++KALNA+IE +     E+E +A++ SLQLLN                                   +   P  K P+ +GL++++  +N K+ K ++D+
Subjt:  RKKALNALIESRRVLQGEEEPNAQICSLQLLNTMIRENFSKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDS

Query:  GATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILF--KPSNMVN
        GATHNF+   E  RLG +  K     +K VN+ A    G A  V   +G W+G++ FT+ P+D  K+VLG+DFL K  A+   ++ ++ +   + S MV 
Subjt:  GATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILF--KPSNMVN

Query:  LQCMEKVSQPTITAMQLQKQRRKKK
              +  P ++ MQ++K+ +++K
Subjt:  LQCMEKVSQPTITAMQLQKQRRKKK

A0A4P8VTG9 Retrotrans_gag domain-containing protein8.8e-2233.54Show/hide
Query:  LNTMIRENFSKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVV
        LN+++  +  + D+E  +E +          +  + ++       KP G+GLLF+++T+  K+   MI++G +HNF+   E +RLG ++ KG   +IKV+
Subjt:  LNTMIRENFSKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVV

Query:  NTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPS
        N+  M+I G A  VKT +G W G + F+++PLD +K+VLG++FL+++ A   S+ N+L + + S
Subjt:  NTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPS

A0A5A7T2W8 Retrotrans_gag domain-containing protein1.2e-2351.38Show/hide
Query:  SPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLG
        S  SK+P+  GLL++D T NNK+   M+D+GATHN MDP+E +RLG +  + S+  IK+++ K+M  IG A  VKT+VG WQGKL+F I  LD  KI+LG
Subjt:  SPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLG

Query:  LDFLDKSYA
        LDF+D +++
Subjt:  LDFLDKSYA

A0A6L2LZF0 Reverse transcriptase domain-containing protein1.7e-2032.29Show/hide
Query:  QGEEEPNAQICSLQLLNTMIRENFSKKDKEEKVEGKNEEYKG-------------TLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGA
        QG ++ +  I   + L        S K K+ KV  +     G             ++C +R ++ +       K  G+GL +++ T+N   V+ ++DS A
Subjt:  QGEEEPNAQICSLQLLNTMIRENFSKKDKEEKVEGKNEEYKG-------------TLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDSGA

Query:  THNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSN--MVNLQ
        THNF+   E ERLG   +KGS  TIK VN+ A  I G A  V+ K+GEW+G +  +++P+D  K VLGL+FLDK  A    + N L +       MV+++
Subjt:  THNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSN--MVNLQ

Query:  CMEKVSQPTITAMQLQKQRRKKK
           K    T++AMQ +K   K +
Subjt:  CMEKVSQPTITAMQLQKQRRKKK

SwissProt top hitse value%identityAlignment
Q2H085 DNA damage-inducible protein 15.5e-0533.33Show/hide
Query:  LLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLG--RKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYA
        +L+L+V +N   VK ++DSGA    M P+  E  G  R V K  +   + V T   NIIG   S + K+G       FT+M     +++LGLD L +  A
Subjt:  LLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLG--RKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYA

Query:  LLASYVNALIL
         +    + LI+
Subjt:  LLASYVNALIL

Q7S906 DNA damage-inducible protein 18.5e-0634.23Show/hide
Query:  LLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLG--RKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYA
        +L+LDV +N   VK ++DSGA    M P   E  G  R V K      K V T    IIG   +   K+G       FT+M      ++LGLD L +  A
Subjt:  LLFLDVTLNNKSVKVMIDSGATHNFMDPKEVERLG--RKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYA

Query:  LLASYVNALIL
         +    NAL++
Subjt:  LLASYVNALIL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAGACACGGGAAGGCCACGGAGGAGAAAGAAGGCATTAAATGCCCTAATAGAGTCCCGTAGAGTATTGCAAGGAGAGGAAGAACCCAATGCCCAAATTTGTTC
CTTGCAACTACTTAACACCATGATTCGAGAAAACTTTTCGAAGAAGGACAAAGAGGAAAAGGTTGAGGGAAAGAATGAAGAATATAAAGGGACTTTGTGTGTCATGCGAA
AAATAGACGAAATGACCACAAGCCCTCCTTCAAAGAAGCCTGAAGGCCGAGGTTTGCTCTTCTTGGATGTCACACTCAACAATAAGAGTGTCAAGGTAATGATTGATTCT
GGCGCAACCCACAACTTTATGGATCCAAAGGAGGTCGAAAGACTAGGTCGTAAAGTCGTCAAAGGAAGCAATGCCACAATCAAAGTAGTCAACACCAAGGCTATGAATAT
CATTGGCACGGCTTGGAGTGTCAAGACTAAAGTGGGTGAGTGGCAAGGTAAGCTTCACTTCACCATAATGCCACTAGACGGACACAAGATTGTCCTAGGCTTGGACTTCT
TGGATAAATCCTATGCCCTTCTTGCTTCCTACGTAAATGCACTTATCCTCTTCAAGCCATCAAATATGGTGAACCTACAATGCATGGAGAAAGTCAGTCAACCCACAATC
ACAGCCATGCAACTTCAAAAGCAAAGACGAAAAAAGAAAAGTCGCAACGGGGACGTTGCAAAAATGGCCCCAAATTTTACGCCAAGTCATGCCACAAAACTCCTTCAGCA
AAGCCAAGGAAGGATCATGACATGTGTCAAGACGTCCCGAATGGCAGCCCACGACATCTTTGTGCTGCCCAAGCATGTGCCCATGGCATTAGCACATGCCCACCACAGTC
GCATGCCCATGTGTAGGCGTGCACGCATAGACCAAGGCCCACATACAGCCTCATGCGCATATGACACAGCCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAGACACGGGAAGGCCACGGAGGAGAAAGAAGGCATTAAATGCCCTAATAGAGTCCCGTAGAGTATTGCAAGGAGAGGAAGAACCCAATGCCCAAATTTGTTC
CTTGCAACTACTTAACACCATGATTCGAGAAAACTTTTCGAAGAAGGACAAAGAGGAAAAGGTTGAGGGAAAGAATGAAGAATATAAAGGGACTTTGTGTGTCATGCGAA
AAATAGACGAAATGACCACAAGCCCTCCTTCAAAGAAGCCTGAAGGCCGAGGTTTGCTCTTCTTGGATGTCACACTCAACAATAAGAGTGTCAAGGTAATGATTGATTCT
GGCGCAACCCACAACTTTATGGATCCAAAGGAGGTCGAAAGACTAGGTCGTAAAGTCGTCAAAGGAAGCAATGCCACAATCAAAGTAGTCAACACCAAGGCTATGAATAT
CATTGGCACGGCTTGGAGTGTCAAGACTAAAGTGGGTGAGTGGCAAGGTAAGCTTCACTTCACCATAATGCCACTAGACGGACACAAGATTGTCCTAGGCTTGGACTTCT
TGGATAAATCCTATGCCCTTCTTGCTTCCTACGTAAATGCACTTATCCTCTTCAAGCCATCAAATATGGTGAACCTACAATGCATGGAGAAAGTCAGTCAACCCACAATC
ACAGCCATGCAACTTCAAAAGCAAAGACGAAAAAAGAAAAGTCGCAACGGGGACGTTGCAAAAATGGCCCCAAATTTTACGCCAAGTCATGCCACAAAACTCCTTCAGCA
AAGCCAAGGAAGGATCATGACATGTGTCAAGACGTCCCGAATGGCAGCCCACGACATCTTTGTGCTGCCCAAGCATGTGCCCATGGCATTAGCACATGCCCACCACAGTC
GCATGCCCATGTGTAGGCGTGCACGCATAGACCAAGGCCCACATACAGCCTCATGCGCATATGACACAGCCAGCTAG
Protein sequenceShow/hide protein sequence
MVEDTGRPRRRKKALNALIESRRVLQGEEEPNAQICSLQLLNTMIRENFSKKDKEEKVEGKNEEYKGTLCVMRKIDEMTTSPPSKKPEGRGLLFLDVTLNNKSVKVMIDS
GATHNFMDPKEVERLGRKVVKGSNATIKVVNTKAMNIIGTAWSVKTKVGEWQGKLHFTIMPLDGHKIVLGLDFLDKSYALLASYVNALILFKPSNMVNLQCMEKVSQPTI
TAMQLQKQRRKKKSRNGDVAKMAPNFTPSHATKLLQQSQGRIMTCVKTSRMAAHDIFVLPKHVPMALAHAHHSRMPMCRRARIDQGPHTASCAYDTAS