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PI0003228 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003228
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionElongation factor
Genome locationchr01:23821383..23822906
RNA-Seq ExpressionPI0003228
SyntenyPI0003228
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB39388.1 hypothetical protein L484_025085 [Morus notabilis]3.5e-1777.19Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +S L+SP KK+WDRLHS HR  R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

KGN44804.1 hypothetical protein Csa_015628 [Cucumis sativus]6.2e-3096.88Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLP
        MGWFKSFLISPFKKLWDRLHSPH+SNRKGIYILYKDVKSCPCEDVQMLWSILVQS SPPNSPLP
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLP

PON55247.1 hypothetical protein PanWU01x14_189360 [Parasponia andersonii]2.1e-1778.95Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +SF +SP KKLWDRLHS HR  R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

PON94924.1 elongation factor [Trema orientale]2.7e-1778.95Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +S L+SP KKLWDRLHS HR  R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

XP_025982996.1 uncharacterized protein LOC113000477 [Glycine max]2.7e-1773.77Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNS
        MGWF+S L+ P KKLWDRLHS H+  R+GIYILYKDVKSCPCEDV +LWSILV+SG+ P S
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNS

TrEMBL top hitse value%identityAlignment
A0A0A0K7C3 Uncharacterized protein3.0e-3096.88Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLP
        MGWFKSFLISPFKKLWDRLHSPH+SNRKGIYILYKDVKSCPCEDVQMLWSILVQS SPPNSPLP
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLP

A0A2P5C2G4 Uncharacterized protein1.0e-1778.95Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +SF +SP KKLWDRLHS HR  R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

A0A2P5FAV2 Elongation factor1.3e-1778.95Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +S L+SP KKLWDRLHS HR  R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

A0A498KIY5 Uncharacterized protein1.7e-1774.19Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSP
        MGW +S L+SP KKLWDRLHS HR  RKGIYILYKDV+SCPCEDV +LWSILV S S P  P
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSP

K7MYL2 Uncharacterized protein1.3e-1773.77Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNS
        MGWF+S L+ P KKLWDRLHS H+  R+GIYILYKDVKSCPCEDV +LWSILV+SG+ P S
Subjt:  MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGTTCAAATCCTTCCTCATTTCACCATTCAAGAAGCTTTGGGATCGTCTTCACTCCCCTCATAGATCAAACCGAAAAGGAATCTACATTTTGTATAAAGATGT
GAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTTCAGTCTGGCTCTCCTCCTAATTCACCATTACCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATGGTTCAAATCCTTCCTCATTTCACCATTCAAGAAGCTTTGGGATCGTCTTCACTCCCCTCATAGATCAAACCGAAAAGGAATCTACATTTTGTATAAAGATGT
GAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTTCAGTCTGGCTCTCCTCCTAATTCACCATTACCGTAATGAAACCGAGCTTTTCTCCGTTGCT
GAAGATGGCGATCCTTGTATAGAGAACATCGACCCGTCATACTACATACTTAAATGAATTTTGTAAATTCTCTCGATTTCTTTCTTCTTCTTCCCCTTCCTATGAGTTTA
ACCATATGGAAACATACATAATTTTACAATTCACAGTATATTTAAATACATATTCTCACACTTTCAGAAAA
Protein sequenceShow/hide protein sequence
MGWFKSFLISPFKKLWDRLHSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLP