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PI0003229 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003229
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:119160..119770
RNA-Seq ExpressionPI0003229
SyntenyPI0003229
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]2.1e-4062.42Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IATS  NNLT L+EL                               K FVKTLR DENRI KE  T + RLARLS KEAKLEAKLKVVR ES 
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLS +ISKN+I+LKQKQ EI KTCEEIDKL+CA ++GD DAKM SALRESLENT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

KAA0060137.1 uncharacterized protein E6C27_scaffold39G00580 [Cucumis melo var. makuwa]3.3e-4163.03Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IA SG NNLT L+EL                              AK FVKTLR DEN I +E  T + RLARLS KEAKLEAKLKVVR ES 
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLSD+ISKN+I+LKQKQHEI KTCEEIDK ECAP++ DVDAKM SALRESL+NT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]1.1e-3961.82Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IATS  NNLT L+EL                               K FVKTLR DENRI KE  T + RLARLS KEAKLEAKLKVVR ES 
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLS +ISKN+I+LKQKQ EI KTCEEIDKL+CA ++GD DAKM  ALRESLENT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

XP_016903650.1 PREDICTED: uncharacterized protein LOC103504169 [Cucumis melo]5.1e-4263.64Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IATSG NNLT L+EL                              AK FVKTLR DENRI +E  T +  LARLS KEAKLEAKLK VR E  
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLS +ISKN+I+LKQKQHEI KTCEEIDKLECAP++GDVDAKM SALRESLENT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]5.1e-4263.03Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        MHKIFD IATSG +NL  LREL                              AK FVKTLR DENRI  E  T K RL RLS KEAKLEAKLK+VR ES 
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLS +I KND++LKQKQHEI KTCEEIDKLECAP+VGD+DAKM S LRESLE+T EELKN KWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

TrEMBL top hitse value%identityAlignment
A0A1S4E6N4 uncharacterized protein LOC1035041692.5e-4263.64Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IATSG NNLT L+EL                              AK FVKTLR DENRI +E  T +  LARLS KEAKLEAKLK VR E  
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLS +ISKN+I+LKQKQHEI KTCEEIDKLECAP++GDVDAKM SALRESLENT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

A0A5A7SJ85 Uncharacterized protein1.0e-4062.42Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IATS  NNLT L+EL                               K FVKTLR DENRI KE  T + RLARLS KEAKLEAKLKVVR ES 
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLS +ISKN+I+LKQKQ EI KTCEEIDKL+CA ++GD DAKM SALRESLENT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

A0A5A7SWI5 Uncharacterized protein2.5e-4263.64Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IATSG NNLT L+EL                              AK FVKTLR DENRI +E  T +  LARLS KEAKLEAKLK VR E  
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLS +ISKN+I+LKQKQHEI KTCEEIDKLECAP++GDVDAKM SALRESLENT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

A0A5A7UZR8 Uncharacterized protein1.6e-4163.03Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IA SG NNLT L+EL                              AK FVKTLR DEN I +E  T + RLARLS KEAKLEAKLKVVR ES 
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLSD+ISKN+I+LKQKQHEI KTCEEIDK ECAP++ DVDAKM SALRESL+NT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

A0A5D3C453 Uncharacterized protein5.1e-4061.82Show/hide
Query:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN
        M KIF  IATS  NNLT L+EL                               K FVKTLR DENRI KE  T + RLARLS KEAKLEAKLKVVR ES 
Subjt:  MHKIFDVIATSGRNNLTRLREL-----------------------------GAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESN

Query:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP
        KLS +ISKN+I+LKQKQ EI KTCEEIDKL+CA ++GD DAKM  ALRESLENT EELKNLKWTP
Subjt:  KLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDVDAKMFSALRESLENTREELKNLKWTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAAAATCTTTGATGTAATTGCGACCAGTGGCAGAAACAACCTCACCCGTTTGAGAGAACTTGGAGCGAAAAATTTTGTGAAGACGTTGCGATTTGATGAGAACCG
TATATCGAAGGAGGCAGTCACCTTCAAACATCGACTTGCACGATTATCCACCAAGGAAGCTAAACTTGAAGCAAAACTTAAAGTCGTACGTGTAGAGTCCAACAAACTTT
CTGACCTAATTTCCAAGAATGACATAAAGCTGAAGCAAAAACAACATGAGATTTTAAAGACTTGCGAGGAAATTGACAAACTCGAATGTGCCCCTGTCGTTGGTGATGTA
GATGCTAAAATGTTTTCAGCACTTCGTGAATCTTTAGAAAACACACGAGAGGAGCTGAAGAACCTTAAGTGGACTCCTGATTCAAGATCTCTTTTTTATTTATCCTTTTT
TTTTTGTCATTTTAATTTGAATACCCCTTCAACGGGTGTTTGTATTTTGAGGACAAAATTTTGTAATAAAACTTTCATTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATAAAATCTTTGATGTAATTGCGACCAGTGGCAGAAACAACCTCACCCGTTTGAGAGAACTTGGAGCGAAAAATTTTGTGAAGACGTTGCGATTTGATGAGAACCG
TATATCGAAGGAGGCAGTCACCTTCAAACATCGACTTGCACGATTATCCACCAAGGAAGCTAAACTTGAAGCAAAACTTAAAGTCGTACGTGTAGAGTCCAACAAACTTT
CTGACCTAATTTCCAAGAATGACATAAAGCTGAAGCAAAAACAACATGAGATTTTAAAGACTTGCGAGGAAATTGACAAACTCGAATGTGCCCCTGTCGTTGGTGATGTA
GATGCTAAAATGTTTTCAGCACTTCGTGAATCTTTAGAAAACACACGAGAGGAGCTGAAGAACCTTAAGTGGACTCCTGATTCAAGATCTCTTTTTTATTTATCCTTTTT
TTTTTGTCATTTTAATTTGAATACCCCTTCAACGGGTGTTTGTATTTTGAGGACAAAATTTTGTAATAAAACTTTCATTCTTTAA
Protein sequenceShow/hide protein sequence
MHKIFDVIATSGRNNLTRLRELGAKNFVKTLRFDENRISKEAVTFKHRLARLSTKEAKLEAKLKVVRVESNKLSDLISKNDIKLKQKQHEILKTCEEIDKLECAPVVGDV
DAKMFSALRESLENTREELKNLKWTPDSRSLFYLSFFFCHFNLNTPSTGVCILRTKFCNKTFIL