; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003232 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003232
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr07:6790936..6791586
RNA-Seq ExpressionPI0003232
SyntenyPI0003232
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34118.1 hypothetical protein [Cucumis melo subsp. melo]1.7e-9276.85Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFSGEGGSIYFGEYEARELIHNGARIQWHANLQNR+KHERM D HDS FLQ  YFVSMRSCYLSS C N  IITSYSPYR GRQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
        PP I L N L+HWRICTR  TL ELYLP RSLEP KHVT RF +WW  KH TYF+DNRHHLVSS I PPSQP+LPKNR SN+GGK+I L++AMAP  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKEH+++SDSS+S+RH
Subjt:  VKEHREQSDSSRSNRH

KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]1.1e-9176.39Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFSGEGGSIYFGEYEARELIHNGARIQWHANLQNR+KHERM D HDS FLQ  Y VSM SCYLSS C N  IITSYSPY+F RQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
        PP I L N L+HWRICTR  TLSELYLPARSLEP KHVT RF +WW  KH TYF+DNRHHLVSS IPPPSQ +LPKNR  N+GGK+IRL++AMAP  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKEH+++SDSS+S+RH
Subjt:  VKEHREQSDSSRSNRH

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.3e-9276.85Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFS EGGSIYFGEYEARELIHNGARIQWHA+LQNR+KHERM D HDS FLQ+ YFVSMRSCYLSS C N  IITSYSPYRFGRQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
         P I L N L+HWRICTR  TLSELYLPARSLEP KHVT RF +WW  KH TYF+DNRHHLVSS IPP SQP+LPKNR SN+GGK+IRL++AMAP  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKE +++SDSS+S+RH
Subjt:  VKEHREQSDSSRSNRH

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]3.0e-9276.39Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFSG GGSIYFGEYEARELIHNGARIQWHANLQNR+KHERM D HDS FLQ  YFVSMRSCYLSS C N  IITSYS YRFGRQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
        PP I L N L+H RICTRC TLSELYLPARSLEP KHVT +F +WW  KH TYF+DNRHHLV+SVIP PSQP+LPKNR SN+GGK+IRL++AMAP  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKEH+++S++S+S+RH
Subjt:  VKEHREQSDSSRSNRH

KAA0054204.1 hypothetical protein E6C27_scaffold131G001410 [Cucumis melo var. makuwa]2.7e-9375.93Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFSGEGGSIYFGEYEA ELIHNGARIQWHANLQNR+KHE M D HDS F+Q  YF+SMRSCYLSS C N  IITSY+PYRFGRQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
        PP I L N L+HWRICTR  TLSELYLPA SLEP KHVT RF +WW  KH TYF+DNRHHLVSSVIPPPSQP+LPKNR SN+GGK+IRL++AM P  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKEH+++SD+S+S+RH
Subjt:  VKEHREQSDSSRSNRH

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein5.5e-9276.39Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFSGEGGSIYFGEYEARELIHNGARIQWHANLQNR+KHERM D HDS FLQ  Y VSM SCYLSS C N  IITSYSPY+F RQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
        PP I L N L+HWRICTR  TLSELYLPARSLEP KHVT RF +WW  KH TYF+DNRHHLVSS IPPPSQ +LPKNR  N+GGK+IRL++AMAP  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKEH+++SDSS+S+RH
Subjt:  VKEHREQSDSSRSNRH

A0A5A7TX42 Uncharacterized protein1.1e-9276.85Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFS EGGSIYFGEYEARELIHNGARIQWHA+LQNR+KHERM D HDS FLQ+ YFVSMRSCYLSS C N  IITSYSPYRFGRQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
         P I L N L+HWRICTR  TLSELYLPARSLEP KHVT RF +WW  KH TYF+DNRHHLVSS IPP SQP+LPKNR SN+GGK+IRL++AMAP  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKE +++SDSS+S+RH
Subjt:  VKEHREQSDSSRSNRH

A0A5A7U8L3 PMD domain-containing protein1.4e-9276.39Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFSG GGSIYFGEYEARELIHNGARIQWHANLQNR+KHERM D HDS FLQ  YFVSMRSCYLSS C N  IITSYS YRFGRQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
        PP I L N L+H RICTRC TLSELYLPARSLEP KHVT +F +WW  KH TYF+DNRHHLV+SVIP PSQP+LPKNR SN+GGK+IRL++AMAP  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKEH+++S++S+S+RH
Subjt:  VKEHREQSDSSRSNRH

A0A5A7UGA8 Uncharacterized protein1.3e-9375.93Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFSGEGGSIYFGEYEA ELIHNGARIQWHANLQNR+KHE M D HDS F+Q  YF+SMRSCYLSS C N  IITSY+PYRFGRQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
        PP I L N L+HWRICTR  TLSELYLPA SLEP KHVT RF +WW  KH TYF+DNRHHLVSSVIPPPSQP+LPKNR SN+GGK+IRL++AM P  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKEH+++SD+S+S+RH
Subjt:  VKEHREQSDSSRSNRH

E5GCB9 PMD domain-containing protein8.4e-9376.85Show/hide
Query:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI
        M NFSGEGGSIYFGEYEARELIHNGARIQWHANLQNR+KHERM D HDS FLQ  YFVSMRSCYLSS C N  IITSYSPYR GRQFGFYQD+PN IG +
Subjt:  MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSI

Query:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE
        PP I L N L+HWRICTR  TL ELYLP RSLEP KHVT RF +WW  KH TYF+DNRHHLVSS I PPSQP+LPKNR SN+GGK+I L++AMAP  E E
Subjt:  PPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHERE

Query:  VKEHREQSDSSRSNRH
        VKEH+++SDSS+S+RH
Subjt:  VKEHREQSDSSRSNRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18510.1 Aminotransferase-like, plant mobile domain family protein5.9e-0630.61Show/hide
Query:  FVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSIPPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYF
        F S   C   S+      +  Y PYR  RQFG  QD+P G+ +   +I  ++A   W   +       LYLP++      +VT R+++WW      YF
Subjt:  FVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSIPPEIMLRNALHHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAACTTTTCTGGTGAAGGTGGGTCTATTTATTTTGGAGAATATGAGGCGCGAGAATTGATCCACAATGGTGCAAGAATTCAATGGCACGCAAACCTTCAGAATCG
GAATAAACATGAACGCATGTTCGATGCTCACGATTCATTGTTTCTGCAGTCCTTCTATTTTGTGAGTATGCGGTCATGCTACTTATCATCCCACTGTGGAAACATTTCTA
TCATAACATCATACAGCCCATATCGATTTGGGCGGCAGTTTGGCTTTTACCAAGATATCCCTAATGGTATAGGGAGCATACCACCTGAAATCATGCTGAGGAATGCATTA
CATCATTGGAGGATATGTACGAGGTGCAGAACTTTATCTGAGTTATACCTGCCTGCCCGTTCATTAGAGCCTAGCAAGCATGTGACACCGCGATTCAAAAATTGGTGGGC
TATGAAGCATGAAACCTATTTTAAGGATAATAGACACCATTTGGTGAGCAGTGTCATTCCTCCCCCATCACAACCCAAACTGCCCAAGAATCGAGAAAGTAATGTGGGTG
GCAAACAGATCCGCTTGATTGACGCAATGGCTCCTATCCACGAAAGGGAGGTCAAGGAGCATAGAGAGCAGAGTGATAGCAGCAGAAGCAATCGTCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCAACTTTTCTGGTGAAGGTGGGTCTATTTATTTTGGAGAATATGAGGCGCGAGAATTGATCCACAATGGTGCAAGAATTCAATGGCACGCAAACCTTCAGAATCG
GAATAAACATGAACGCATGTTCGATGCTCACGATTCATTGTTTCTGCAGTCCTTCTATTTTGTGAGTATGCGGTCATGCTACTTATCATCCCACTGTGGAAACATTTCTA
TCATAACATCATACAGCCCATATCGATTTGGGCGGCAGTTTGGCTTTTACCAAGATATCCCTAATGGTATAGGGAGCATACCACCTGAAATCATGCTGAGGAATGCATTA
CATCATTGGAGGATATGTACGAGGTGCAGAACTTTATCTGAGTTATACCTGCCTGCCCGTTCATTAGAGCCTAGCAAGCATGTGACACCGCGATTCAAAAATTGGTGGGC
TATGAAGCATGAAACCTATTTTAAGGATAATAGACACCATTTGGTGAGCAGTGTCATTCCTCCCCCATCACAACCCAAACTGCCCAAGAATCGAGAAAGTAATGTGGGTG
GCAAACAGATCCGCTTGATTGACGCAATGGCTCCTATCCACGAAAGGGAGGTCAAGGAGCATAGAGAGCAGAGTGATAGCAGCAGAAGCAATCGTCATTAG
Protein sequenceShow/hide protein sequence
MFNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMFDAHDSLFLQSFYFVSMRSCYLSSHCGNISIITSYSPYRFGRQFGFYQDIPNGIGSIPPEIMLRNAL
HHWRICTRCRTLSELYLPARSLEPSKHVTPRFKNWWAMKHETYFKDNRHHLVSSVIPPPSQPKLPKNRESNVGGKQIRLIDAMAPIHEREVKEHREQSDSSRSNRH