; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003245 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003245
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionexosome complex component RRP4 homolog
Genome locationchr08:3744767..3752820
RNA-Seq ExpressionPI0003245
SyntenyPI0003245
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041865.1 exosome complex component RRP4-like protein isoform X2 [Cucumis melo var. makuwa]3.8e-16895.72Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV
        MRGLQLSLNHTQKIRLERAQERLKSLS KGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR YKPEVGDIVVGRV
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV

Query:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL
Subjt:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  KQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
         QYGIDLILGCNGFIWIGEHVDPK+D  IED VDK EQK LKFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  KQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

XP_008442058.1 PREDICTED: exosome complex component RRP4 homolog isoform X1 [Cucumis melo]1.6e-16996.01Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLS KGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL 
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK

Query:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
        QYGIDLILGCNGFIWIGEHVDPK+D  IED VDK EQK LKFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
Subjt:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH

Query:  EMLGSEFCVLTAEKEVERRSSSKKRG
        EMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  EMLGSEFCVLTAEKEVERRSSSKKRG

XP_008442061.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo]1.6e-16996.01Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLS KGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL 
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK

Query:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
        QYGIDLILGCNGFIWIGEHVDPK+D  IED VDK EQK LKFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
Subjt:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH

Query:  EMLGSEFCVLTAEKEVERRSSSKKRG
        EMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  EMLGSEFCVLTAEKEVERRSSSKKRG

XP_031740749.1 exosome complex component RRP4 homolog [Cucumis sativus]4.0e-17397.25Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        M+GLQLSLNHTQKIRLERAQERLKSLS KGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL+
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK

Query:  QYGIDLILGCNGFIWIGEHVDPK-DDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPK  DT IEDQVDK EQKG KFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPK-DDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

XP_038882865.1 exosome complex component RRP4 homolog isoform X2 [Benincasa hispida]4.0e-16591.44Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLNHTQKIRL+RAQERL+SLS K NSDASV+VADTIPLNYEDGVLKGHGTLDLNGEV+A+ICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTV  YL+KRRKQHFHHL+
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK

Query:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDP +D  I+DQ++K EQKG KFEGTF NQVQ+ VYTPLETRQNICRTANAIRVLS LGFIMTVEVIMEIV+LSIS+NIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERR+SSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

TrEMBL top hitse value%identityAlignment
A0A1S3B4T9 exosome complex component RRP4 homolog isoform X27.6e-17096.01Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLS KGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL 
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK

Query:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
        QYGIDLILGCNGFIWIGEHVDPK+D  IED VDK EQK LKFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
Subjt:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH

Query:  EMLGSEFCVLTAEKEVERRSSSKKRG
        EMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  EMLGSEFCVLTAEKEVERRSSSKKRG

A0A1S3B5H2 exosome complex component RRP4 homolog isoform X17.6e-17096.01Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLS KGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL 
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK

Query:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
        QYGIDLILGCNGFIWIGEHVDPK+D  IED VDK EQK LKFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
Subjt:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH

Query:  EMLGSEFCVLTAEKEVERRSSSKKRG
        EMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  EMLGSEFCVLTAEKEVERRSSSKKRG

A0A5A7TKA1 Exosome complex component RRP4-like protein isoform X21.9e-16895.72Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV
        MRGLQLSLNHTQKIRLERAQERLKSLS KGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR YKPEVGDIVVGRV
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIVVGRV

Query:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL
Subjt:  TEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  KQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
         QYGIDLILGCNGFIWIGEHVDPK+D  IED VDK EQK LKFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  KQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

A0A5D3C2G3 Exosome complex component RRP4-like protein isoform X27.6e-17096.01Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQLSLNHTQKIRLERAQERLKSLS KGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL 
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK

Query:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
        QYGIDLILGCNGFIWIGEHVDPK+D  IED VDK EQK LKFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH
Subjt:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVH

Query:  EMLGSEFCVLTAEKEVERRSSSKKRG
        EMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  EMLGSEFCVLTAEKEVERRSSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog1.3e-16189.3Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLN TQKIRL+RA E L+S+S K NSDASVVVADTIPLNYEDGVLKGHGTLDL GEVVA+ICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQLLTVSPYL+KRRKQHFHHL+
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLK

Query:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDP +D  +ED ++K EQKG KFEG+FGNQVQE +YTPLETRQNICRTANAIRVLS LGFIM+VEVIME V+LSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKE ERR+SSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp46.6e-4641.25Show/hide
Query:  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G + AS+ G V+RVNKLI V+ LR++Y PE+GD+++G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQ
        ++ AEV+    DG + +  RS KYGKL  G  L V P L+ R K H + L   G+D+IL  NG++W+ +H + +  +     + +LE++    E  + N+
Subjt:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQ

Query:  VQEV--YTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIMEIVNLSISLNID
          E+  YT L  +R +IC    A R L     S   F  +  V   + +L++  N+D
Subjt:  VQEV--YTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIMEIVNLSISLNID

Q13868 Exosome complex component RRP41.9e-4549.53Show/hide
Query:  KIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  A++ L     +      VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCN

Query:  GFIWIGEHVDPKDD
        GFIWI    + K++
Subjt:  GFIWIGEHVDPKDD

Q2KID0 Exosome complex component RRP43.9e-4649.53Show/hide
Query:  KIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCN

Query:  GFIWIGEHVDPKDD
        GFIW+    + K+D
Subjt:  GFIWIGEHVDPKDD

Q8VBV3 Exosome complex component RRP46.0e-4750Show/hide
Query:  KIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL +A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCN

Query:  GFIWIGEHVDPKDD
        GFIWI    + KD+
Subjt:  GFIWIGEHVDPKDD

Q9ZVT7 Exosome complex component RRP4 homolog1.7e-11865.34Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQL L+ TQK+R ERA ERL+SLS   NSDASV+V D+IP+N++D  LKGHGT +++GE++A++CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQLL V PYL+KR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  KQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        +  GIDLI+GCNGFIW+GEHV+ +D   I+DQ D+      +   +     ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID+
Subjt:  KQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKR
        H+MLGSEF V+ AE E ERR + +K+
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 41.2e-11965.34Show/hide
Query:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQL L+ TQK+R ERA ERL+SLS   NSDASV+V D+IP+N++D  LKGHGT +++GE++A++CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQLL V PYL+KR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  KQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        +  GIDLI+GCNGFIW+GEHV+ +D   I+DQ D+      +   +     ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID+
Subjt:  KQYGIDLILGCNGFIWIGEHVDPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKR
        H+MLGSEF V+ AE E ERR + +K+
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGCTTACAACTTTCCTTGAATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTTGAAGGGCAATTCTGATGCTTCTGTTGT
AGTTGCCGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAGCGAG
TCAATAAGCTTATCTATGTACGTGCCTTGCGTGCCAGATATAAACCGGAGGTTGGTGATATTGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGAT
ATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCCGTTGATGAACTCAACATGCGGAGCATTTTTGA
AGAAAATGATGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATGGGTTACACCTTCAAGCAAGAAGCCAGAAGTATGGCAAGCTTGAACGTGGTCAACTGCTCACAG
TTTCACCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTGAAGCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTT
GATCCCAAAGATGATACGACGATAGAGGATCAAGTTGATAAACTTGAACAAAAGGGTTTGAAATTTGAAGGAACTTTTGGTAACCAAGTGCAAGAAGTATATACTCCATT
AGAGACACGACAGAATATCTGCAGAACTGCAAACGCGATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTT
CTCTAAACATTGATGTGCACGAAATGCTTGGCTCAGAGTTCTGTGTTCTCACGGCGGAAAAAGAGGTCGAACGACGTTCTTCGAGTAAGAAGAGGGGGTAA
mRNA sequenceShow/hide mRNA sequence
CGCGCGCTCAGTCTCCAACAGCCACAGGCGGATGGCAGGACAACTGGATCCCACAGACCCTCAAGCGCGCAGCCCTGTCGTCGACGGTGGTTTAAGTTAGCATCATTTCT
TCTCCGTTAGAGACTCCGGCGCGAACAGGTTGTTCAGAACATTTCTGACGACTGTGAGGGTCTTGCAGCGGCGTTTCTGACTTGGGGATAAGTTTTCGGCTGTTACTCAC
ACTCTGATTAACTTCGAATCAGTTTATCCATAACATTCAAGACCTCGAGGAAGTTGGCATTGCTCAAGAAAGTGAATTTTTTATTGAGAATTGTAGGATTTTCGATTGAG
ATATGAGAGGCTTACAACTTTCCTTGAATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTTGAAGGGCAATTCTGATGCTTCTGTT
GTAGTTGCCGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAGCG
AGTCAATAAGCTTATCTATGTACGTGCCTTGCGTGCCAGATATAAACCGGAGGTTGGTGATATTGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGG
ATATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCCGTTGATGAACTCAACATGCGGAGCATTTTT
GAAGAAAATGATGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATGGGTTACACCTTCAAGCAAGAAGCCAGAAGTATGGCAAGCTTGAACGTGGTCAACTGCTCAC
AGTTTCACCATATCTAATAAAGAGACGCAAACAACACTTCCATCATTTGAAGCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATG
TTGATCCCAAAGATGATACGACGATAGAGGATCAAGTTGATAAACTTGAACAAAAGGGTTTGAAATTTGAAGGAACTTTTGGTAACCAAGTGCAAGAAGTATATACTCCA
TTAGAGACACGACAGAATATCTGCAGAACTGCAAACGCGATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTAT
TTCTCTAAACATTGATGTGCACGAAATGCTTGGCTCAGAGTTCTGTGTTCTCACGGCGGAAAAAGAGGTCGAACGACGTTCTTCGAGTAAGAAGAGGGGGTAATTTTGTC
TTCTTTCAAGAATTGTGAACAATTTGAATTACCAAAACCGTTTGATTTGCAGAGAAATTTAGTGTTATTATATTTTGTTGAATTTTAGATTAGCACCACTTCGTATCTAT
TAGTATCAATATAGAATAAAATGTCCTTAATTATTATGCTGTATGTGGTTTCATAAATGTCTTAGGATTACTTTTAGGATTTTACTATATGTCACATTTTTGGTTAGATT
AATACTAGATGAAACTTAACTTTATTAAA
Protein sequenceShow/hide protein sequence
MRGLQLSLNHTQKIRLERAQERLKSLSLKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLD
INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLKQYGIDLILGCNGFIWIGEHV
DPKDDTTIEDQVDKLEQKGLKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG