; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003252 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003252
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:3300211..3309082
RNA-Seq ExpressionPI0003252
SyntenyPI0003252
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6472.93Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV
        MFLV+L QFEPL+DATSLL Q++KDADV+FT  ML +I S+ SPRFVATLQ+S RLFTN+SVDH  SSKVSLE FHDAMLDGGSFSSM+IH+L+S  QM+
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LR+E PS + PPLH EL LSPPQAE+LGQVEYG FFTV SK LR+IIKELPLFH D V V  T ++VKFSI SKEI +TKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

TYK02993.1 uncharacterized protein E5676_scaffold46G00820 [Cucumis melo var. makuwa]1.7e-7385.08Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV
        MFLVRL QFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSP+FVATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGG                 
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
              SHDVPPLHHELALSPPQAENLGQVEYGNFFTVTS+ELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]2.0e-9097.24Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV
        MFLVRL QFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSP+FVATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGGSFSSMTIHLLD+TNQMV
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTS+ELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]1.4e-5661.88Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV
        MFLVRL  F+PL DATS LAQ+A++AD+KFTPL   II SNRSPRFVA LQ++   F N+ VD++ +S++SLE FHDA+LDGG+  SMTIHLL +  Q++
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LRFE+ SH  P +HHEL+L+P Q E+LG+V+Y  FF++ SK+LRR+I+ LP+FH D++ VT TGSQVKFSI SKEI+LTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]6.3e-5763.96Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVA-KDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQM
        MFLV+L  F+PL+DATS  AQ++  DADVKFTP    II S+RSPRF+ATLQLS + FT+FSVDH+ SSKVSLE FHDA+LDGGSF+SMTIHLLD TNQ+
Subjt:  MFLVRLAQFEPLIDATSLLAQVA-KDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQ--VEYGNFFTVTSKELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEFTCLLYDFVE
        +LRF+TPS ++ PLHHELALSPPQAE+  +GQ  ++ G +F V SK LRRIIKELP+F  D+ V V VT S+VKFSI SKEI+L +   C + +  E
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQ--VEYGNFFTVTSKELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEFTCLLYDFVE

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980109.4e-9197.24Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV
        MFLVRL QFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSP+FVATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGGSFSSMTIHLLD+TNQMV
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTS+ELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

A0A1S3CL88 uncharacterized protein LOC1035022508.9e-5764.47Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQM
        MFLV+L  F+PL+DATS LAQ++ D AD+KFTP    II S+RSPRF+ATLQLS + FT FSVD++ SSKVSLE FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSKELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEFTCLLYDFVE
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V SK LRRIIK+LP+F  D+ +SV VT S+VKFSI SKEIILT+   C +  F E
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSKELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEFTCLLYDFVE

A0A1S4E4N8 uncharacterized protein LOC1035022636.8e-5761.88Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV
        MFLVRL  F+PL DATS LAQ+A++AD+KFTPL   II SNRSPRFVA LQ++   F N+ VD++ +S++SLE FHDA+LDGG+  SMTIHLL +  Q++
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LRFE+ SH  P +HHEL+L+P Q E+LG+V+Y  FF++ SK+LRR+I+ LP+FH D++ VT TGSQVKFSI SKEI+LTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

A0A5D3BTK3 Uncharacterized protein8.0e-7485.08Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV
        MFLVRL QFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSP+FVATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGG                 
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
              SHDVPPLHHELALSPPQAENLGQVEYGNFFTVTS+ELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein8.9e-5764.47Show/hide
Query:  MFLVRLAQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQM
        MFLV+L  F+PL+DATS LAQ++ D AD+KFTP    II S+RSPRF+ATLQLS + FT FSVD++ SSKVSLE FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLAQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSKELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEFTCLLYDFVE
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V SK LRRIIK+LP+F  D+ +SV VT S+VKFSI SKEIILT+   C +  F E
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSKELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEFTCLLYDFVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTAGTAAGGCTTGCGCAATTTGAACCTCTCATTGATGCAACCTCCTTGTTGGCTCAAGTTGCTAAGGATGCCGACGTGAAATTCACACCATTGATGCTCATGAT
AATCGTATCAAACCGTTCCCCTCGGTTCGTTGCAACGCTGCAATTGTCGCGACGATTGTTCACCAACTTTTCGGTCGATCATAATAAAAGTTCCAAGGTTTCCCTTGAAC
CCTTCCATGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGACTATCCATCTTTTGGATTCAACAAACCAAATGGTCCTTAGATTTGAGACTCCAAGTCACGATGTG
CCACCATTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAAAGAGTTAAGAAGGATTAT
AAAAGAATTACCTCTTTTCCATCAAGATACTGTTAGTGTTACAGTAACTGGTTCTCAAGTCAAGTTCTCTATTCAATCTAAGGAGATTATTCTTACCAAAGAGTTTACGT
GTTTACTTTACGATTTTGTAGAAAGAGGAACCTTCAACCTCTCATCTTCTCCTTCGTCAATCTTCACGCCGTCTCCTCCGACCATTCAGCAGCTCAGTGTCGTCGTCGTC
GCCGCCGCCTCTCTCCGGTTCAGGGCTGCCCCCGCGGCGTATTTCTTCCATTCGTGTCGCCACAGCCTCGTAGGCGGGTTTCCGCTGATTTTATGCTACCTTCTTGTTAC
TGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTAGTAAGGCTTGCGCAATTTGAACCTCTCATTGATGCAACCTCCTTGTTGGCTCAAGTTGCTAAGGATGCCGACGTGAAATTCACACCATTGATGCTCATGAT
AATCGTATCAAACCGTTCCCCTCGGTTCGTTGCAACGCTGCAATTGTCGCGACGATTGTTCACCAACTTTTCGGTCGATCATAATAAAAGTTCCAAGGTTTCCCTTGAAC
CCTTCCATGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGACTATCCATCTTTTGGATTCAACAAACCAAATGGTCCTTAGATTTGAGACTCCAAGTCACGATGTG
CCACCATTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAAAGAGTTAAGAAGGATTAT
AAAAGAATTACCTCTTTTCCATCAAGATACTGTTAGTGTTACAGTAACTGGTTCTCAAGTCAAGTTCTCTATTCAATCTAAGGAGATTATTCTTACCAAAGAGTTTACGT
GTTTACTTTACGATTTTGTAGAAAGAGGAACCTTCAACCTCTCATCTTCTCCTTCGTCAATCTTCACGCCGTCTCCTCCGACCATTCAGCAGCTCAGTGTCGTCGTCGTC
GCCGCCGCCTCTCTCCGGTTCAGGGCTGCCCCCGCGGCGTATTTCTTCCATTCGTGTCGCCACAGCCTCGTAGGCGGGTTTCCGCTGATTTTATGCTACCTTCTTGTTAC
TGGTTGA
Protein sequenceShow/hide protein sequence
MFLVRLAQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDSTNQMVLRFETPSHDV
PPLHHELALSPPQAENLGQVEYGNFFTVTSKELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEFTCLLYDFVERGTFNLSSSPSSIFTPSPPTIQQLSVVVV
AAASLRFRAAPAAYFFHSCRHSLVGGFPLILCYLLVTG