; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003253 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003253
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPolyprotein
Genome locationchr11:23268679..23269925
RNA-Seq ExpressionPI0003253
SyntenyPI0003253
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.4e-4172.46Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG   SSS NS PSPMSA Q  MDLGFT VTRS++R   IWI SPTESST  RPS N +  SGGV QMRPP SP SN ESSTPPTTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDE
        T +K+F+PRPEIK+YFQK  V+YDPIIEPEYQSL L+E
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDE

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]2.6e-4069.23Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG+ LSSS NSAPSPMSADQ AMDLGFT VTRS++R  GI I  PTESST  RPSAN +   G V QM+PP SP SN +SSTPPTTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATI
        TP+K+F+PRP+IK YFQK  V+YDP IE EYQSL L+E  + I
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATI

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]3.0e-4466.86Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG+   SS NSAPSP+SADQ AMDLGFTTVTR  +RSFGIWI SPTESST  RPS N +  S GV QMRPP SP SN ESSTPPTTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQ-RKNTEFL
        TP+K+F+PRPEIK+YFQK  V+YDPIIE EYQSL  +ET + I    E F  N  L+D+ + RK  EF+
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQ-RKNTEFL

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]3.2e-3868.79Show/hide
Query:  RAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTP
        RA STSS+G+  SSS NSAPSPMSADQ AMDLGFTTVTRS+ARS  I I SPT+SST  R SAN +  S  V QMRP  SP SN ESSTPPTTYSQ +TP
Subjt:  RAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTP

Query:  EKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATI
        +K+F+PR EIK+YFQK  ++YD IIEPEYQSL L+ET + I
Subjt:  EKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATI

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]2.9e-5565.87Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG+C SSS NSAPSPMS DQ AMDLG+TTV +S+++S GIWI SP ESST  RPS N +   G V QMR   SP SN ESST PTTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQRKNTEFLNDKSKLIAALAHATIDADFQRLLSTAVITSSS
        TP+KQF+PR EIK+YFQK  VIYDPIIE EYQ                   +NG LQDIDQRKN +FLNDK K +AAL  ATIDADFQRLLSTAV TSSS
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQRKNTEFLNDKSKLIAALAHATIDADFQRLLSTAVITSSS

Query:  SKSASSSI
        SK A S I
Subjt:  SKSASSSI

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.4e-4466.86Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG+   SS NSAPSP+SADQ AMDLGFTTVTR  +RSFGIWI SPTESST  RPS N +  S GV QMRPP SP SN ESSTPPTTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQ-RKNTEFL
        TP+K+F+PRPEIK+YFQK  V+YDPIIE EYQSL  +ET + I    E F  N  L+D+ + RK  EF+
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQ-RKNTEFL

A0A5D3BI61 Uncharacterized protein1.4e-5565.87Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG+C SSS NSAPSPMS DQ AMDLG+TTV +S+++S GIWI SP ESST  RPS N +   G V QMR   SP SN ESST PTTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQRKNTEFLNDKSKLIAALAHATIDADFQRLLSTAVITSSS
        TP+KQF+PR EIK+YFQK  VIYDPIIE EYQ                   +NG LQDIDQRKN +FLNDK K +AAL  ATIDADFQRLLSTAV TSSS
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQRKNTEFLNDKSKLIAALAHATIDADFQRLLSTAVITSSS

Query:  SKSASSSI
        SK A S I
Subjt:  SKSASSSI

A0A5D3BPD3 Uncharacterized protein2.9e-3763.51Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG+  SSS NSAPSP  ADQ AM++GFTTVTRS++RS  I I S TES+T  RPS N +  S GV QMRPP SP SN ESSTP TTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKE
        TP+K+F+PRPEIK+YFQK  V+YDPIIE EYQ  A   + +    ++E
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKE

A0A5D3E4J4 Uncharacterized protein1.3e-4069.23Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG+ LSSS NSAPSPMSADQ AMDLGFT VTRS++R  GI I  PTESST  RPSAN +   G V QM+PP SP SN +SSTPPTTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATI
        TP+K+F+PRP+IK YFQK  V+YDP IE EYQSL L+E  + I
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATI

E5GCE6 Uncharacterized protein6.7e-4272.46Show/hide
Query:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV
        RGR  STSSKG   SSS NS PSPMSA Q  MDLGFT VTRS++R   IWI SPTESST  RPS N +  SGGV QMRPP SP SN ESSTPPTTYSQAV
Subjt:  RGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAV

Query:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDE
        T +K+F+PRPEIK+YFQK  V+YDPIIEPEYQSL L+E
Subjt:  TPEKQFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAGTTTATGGCAGAGGAAGAGCAATCTCTACCTCTTCAAAAGGCAGCTGCCTATCTTCTTCATTAAATTCTGCACCCTCACCCATGAGTGCAGATCAATCTGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTTCGGCATATGGATTGAATCTCCCACGGAGTCTTCTACTTCACTTAGGCCTTCGGCCAATCCTG
TCTTTCTTTCTGGTGGAGTCACTCAAATGAGGCCTCCTACCTCTCCTCAATCAAATATGGAGTCATCTACTCCTCCTACGACGTATTCTCAGGCCGTCACTCCAGAAAAA
CAATTCATACCAAGGCCCGAGATCAAAACATATTTCCAAAAACAAGGTGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCGCTCTAGATGAGACACATGC
CACCATCAAACACATGAAGGAATGGTTCGCAGAGAATGGCTATCTTCAAGATATTGATCAGAGAAAGAACACAGAGTTCTTAAATGATAAGTCTAAACTTATTGCAGCGC
TGGCACATGCAACAATTGATGCTGACTTTCAAAGGTTATTATCAACTGCAGTAATCACTTCTTCAAGTTCCAAATCAGCATCCTCTTCCATATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAGTTTATGGCAGAGGAAGAGCAATCTCTACCTCTTCAAAAGGCAGCTGCCTATCTTCTTCATTAAATTCTGCACCCTCACCCATGAGTGCAGATCAATCTGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTTCGGCATATGGATTGAATCTCCCACGGAGTCTTCTACTTCACTTAGGCCTTCGGCCAATCCTG
TCTTTCTTTCTGGTGGAGTCACTCAAATGAGGCCTCCTACCTCTCCTCAATCAAATATGGAGTCATCTACTCCTCCTACGACGTATTCTCAGGCCGTCACTCCAGAAAAA
CAATTCATACCAAGGCCCGAGATCAAAACATATTTCCAAAAACAAGGTGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCGCTCTAGATGAGACACATGC
CACCATCAAACACATGAAGGAATGGTTCGCAGAGAATGGCTATCTTCAAGATATTGATCAGAGAAAGAACACAGAGTTCTTAAATGATAAGTCTAAACTTATTGCAGCGC
TGGCACATGCAACAATTGATGCTGACTTTCAAAGGTTATTATCAACTGCAGTAATCACTTCTTCAAGTTCCAAATCAGCATCCTCTTCCATATAG
Protein sequenceShow/hide protein sequence
MSIVYGRGRAISTSSKGSCLSSSLNSAPSPMSADQSAMDLGFTTVTRSKARSFGIWIESPTESSTSLRPSANPVFLSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEK
QFIPRPEIKTYFQKQGVIYDPIIEPEYQSLALDETHATIKHMKEWFAENGYLQDIDQRKNTEFLNDKSKLIAALAHATIDADFQRLLSTAVITSSSSKSASSSI