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PI0003273 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003273
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr01:16532960..16533424
RNA-Seq ExpressionPI0003273
SyntenyPI0003273
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]1.9e-2462.37Show/hide
Query:  NNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHM
        NNQN P  Q  QEQN AY+ HDLD+PI SYASPNLY+F+ GIAYL FGEN  FEI  +++ + QN  QFGGHP EDP++HI +FY I  SF+M
Subjt:  NNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHM

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]2.6e-2658.56Show/hide
Query:  NNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDIL
        NN NNQ +P  QAAQ  N  Y+  D DRPI SYASPNLY+F+ GIAY  F ENTRFEI  V++QIIQN  QF  HP +DPH++I +FYSI  SFHM  I 
Subjt:  NNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDIL

Query:  PKDVRFVLFPL
         +++RF  F L
Subjt:  PKDVRFVLFPL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]3.3e-2158.16Show/hide
Query:  NNNNQNVPPQQAAQEQ-NAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSD
        +N N  VP   A Q Q N   + H+LD PI +Y S NLY+F+LGIAYLVFGEN  FE+ PV++Q+IQ   QF G+  EDPHEHI SFYSI  SFHMS+
Subjt:  NNNNQNVPPQQAAQEQ-NAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSD

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.4e-2442.01Show/hide
Query:  MSDGEQPEFVLDPEIERTFQHNRRRGRQQRVNIMTNNN----NNQNVPPQ-----------QAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVF
        MS+G+ P F +DPEIERTF+   R+ +Q+R N     N     NQ   PQ            A  + N   + HD +RP+  YASPNLYNF+ GI    F
Subjt:  MSDGEQPEFVLDPEIERTFQHNRRRGRQQRVNIMTNNN----NNQNVPPQ-----------QAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVF

Query:  GENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDILPKDVRFVLFPLTLRDEAKR
          N RFE+ PV++Q++Q   QFGG   EDPH H+ SF  I  +F M+ +    +R  LFP +LRDEA++
Subjt:  GENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDILPKDVRFVLFPLTLRDEAKR

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]5.2e-2242.41Show/hide
Query:  MSDGEQPEFVLDPEIERTFQHNRRRGR--QQRVNIMTNNNNNQNVPPQQAAQE--QNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPV
        MS    PEF  +PEI+ TF+    + R  ++R+N M +NNNN+     Q      Q+  ++  D + PI +YA+PNLY+FS GI+  +  EN RFEI PV
Subjt:  MSDGEQPEFVLDPEIERTFQHNRRRGR--QQRVNIMTNNNNNQNVPPQQAAQE--QNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPV

Query:  IIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDILPKDVRFVLFPLTLRDEAKR
        ++Q+IQN RQF     E+PH H+  F  +  +F +  I P  +R  LFP TLRD+AKR
Subjt:  IIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDILPKDVRFVLFPLTLRDEAKR

TrEMBL top hitse value%identityAlignment
A0A5A7UDN8 Uncharacterized protein9.2e-2562.37Show/hide
Query:  NNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHM
        NNQN P  Q  QEQN AY+ HDLD+PI SYASPNLY+F+ GIAYL FGEN  FEI  +++ + QN  QFGGHP EDP++HI +FY I  SF+M
Subjt:  NNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHM

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.66.8e-2055.05Show/hide
Query:  MSDGEQPEFVLDPEIERTFQHNRR-RGRQQRVNIMTNNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQ
        MS+GEQP+FV+D EIER FQ NRR R R+QR N  +N+ NNQ  P  QA Q  N  Y+ H+ DRPI S  SPNLY F+ GI Y  FGEN RF+I PV++ 
Subjt:  MSDGEQPEFVLDPEIERTFQHNRR-RGRQQRVNIMTNNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQ

Query:  IIQ---NTR
        ++    NTR
Subjt:  IIQ---NTR

A0A5A7V2U7 Putative disease resistance RPP13-like protein 11.3e-2658.56Show/hide
Query:  NNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDIL
        NN NNQ +P  QAAQ  N  Y+  D DRPI SYASPNLY+F+ GIAY  F ENTRFEI  V++QIIQN  QF  HP +DPH++I +FYSI  SFHM  I 
Subjt:  NNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDIL

Query:  PKDVRFVLFPL
         +++RF  F L
Subjt:  PKDVRFVLFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.6e-2158.16Show/hide
Query:  NNNNQNVPPQQAAQEQ-NAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSD
        +N N  VP   A Q Q N   + H+LD PI +Y S NLY+F+LGIAYLVFGEN  FE+ PV++Q+IQ   QF G+  EDPHEHI SFYSI  SFHMS+
Subjt:  NNNNQNVPPQQAAQEQ-NAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSD

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.68.9e-2055.05Show/hide
Query:  MSDGEQPEFVLDPEIERTFQHNRR-RGRQQRVNIMTNNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQ
        MS+GEQP+FV+D EIER FQ NRR R R+QR N  +N+ NNQ  P  QA Q  N  Y+ H+ DRPI S  SPNLY F+ GI Y  FGEN RF+I PV++ 
Subjt:  MSDGEQPEFVLDPEIERTFQHNRR-RGRQQRVNIMTNNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQ

Query:  IIQ---NTR
        ++    NTR
Subjt:  IIQ---NTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACGGTGAACAACCCGAATTCGTGCTTGACCCTGAAATTGAACGAACTTTTCAGCATAACAGAAGAAGAGGGAGGCAACAAAGAGTGAACATAATGACAAACAA
TAACAACAACCAAAATGTTCCTCCCCAACAAGCTGCCCAAGAACAAAATGCCGCCTACATGACCCATGATTTAGACAGACCGATTATGTCGTATGCTTCGCCAAACCTCT
ATAACTTCAGCCTAGGAATTGCCTACCTTGTGTTCGGCGAAAATACAAGATTTGAGATCAATCCTGTTATAATACAGATCATTCAGAACACCAGACAGTTTGGTGGTCAC
CCTAGTGAAGATCCACACGAGCATATTCATAGTTTCTACTCCATTTATGTTTCCTTTCACATGTCTGACATATTGCCTAAAGACGTACGATTTGTCCTCTTCCCATTAAC
ACTGAGGGATGAGGCAAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACGGTGAACAACCCGAATTCGTGCTTGACCCTGAAATTGAACGAACTTTTCAGCATAACAGAAGAAGAGGGAGGCAACAAAGAGTGAACATAATGACAAACAA
TAACAACAACCAAAATGTTCCTCCCCAACAAGCTGCCCAAGAACAAAATGCCGCCTACATGACCCATGATTTAGACAGACCGATTATGTCGTATGCTTCGCCAAACCTCT
ATAACTTCAGCCTAGGAATTGCCTACCTTGTGTTCGGCGAAAATACAAGATTTGAGATCAATCCTGTTATAATACAGATCATTCAGAACACCAGACAGTTTGGTGGTCAC
CCTAGTGAAGATCCACACGAGCATATTCATAGTTTCTACTCCATTTATGTTTCCTTTCACATGTCTGACATATTGCCTAAAGACGTACGATTTGTCCTCTTCCCATTAAC
ACTGAGGGATGAGGCAAAGAGATGA
Protein sequenceShow/hide protein sequence
MSDGEQPEFVLDPEIERTFQHNRRRGRQQRVNIMTNNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGH
PSEDPHEHIHSFYSIYVSFHMSDILPKDVRFVLFPLTLRDEAKR