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PI0003290 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003290
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr01:20301766..20302086
RNA-Seq ExpressionPI0003290
SyntenyPI0003290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]5.0e-1661.54Show/hide
Query:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIF
        M   QVNA  SS Q+V Q+D++GC+    PH  DACPLN +IVA+V++DPYSNTYNP WRNHP F
Subjt:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIF

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]2.3e-2156.47Show/hide
Query:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHR
        M ++QVN   SSV  V  + ++ CVGC G +NTD CP NTK++ + +NDPYSNTYN GWRNH  F W G GQ NQGRQG Q  +R
Subjt:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHR

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]1.0e-1661.19Show/hide
Query:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGW
        M + +VN   S V  V Q+ +LGCVGC GPHNTD CP NT+ VA+V+NDPY NTYN GWRNH  F W
Subjt:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGW

TYK04238.1 hypothetical protein E5676_scaffold758G00120 [Cucumis melo var. makuwa]2.0e-1759.21Show/hide
Query:  LGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHRGEASGYHSRHHN
        +GCVG   PHNT+ CPLNT+IVA+V+NDPYSNTYN GWR HP F W G    NQGRQG  G++  EA G+  R ++
Subjt:  LGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHRGEASGYHSRHHN

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]3.0e-1346.49Show/hide
Query:  QVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQG-------DHRGEASGYHSRHHN
        QVNA GS V A+ Q+ +LGCVGC+GPHNT+ACP N +I A V+   +SNTYN GWRNHP F W   G +N+  +GG+         H   + G   R H 
Subjt:  QVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQG-------DHRGEASGYHSRHHN

Query:  ------NKPLYLHH
              NKP  L H
Subjt:  ------NKPLYLHH

TrEMBL top hitse value%identityAlignment
A0A5A7UTC1 Uncharacterized protein1.1e-2156.47Show/hide
Query:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHR
        M ++QVN   SSV  V  + ++ CVGC G +NTD CP NTK++ + +NDPYSNTYN GWRNH  F W G GQ NQGRQG Q  +R
Subjt:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHR

A0A5A7VE68 Uncharacterized protein4.8e-1761.19Show/hide
Query:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGW
        M + +VN   S V  V Q+ +LGCVGC GPHNTD CP NT+ VA+V+NDPY NTYN GWRNH  F W
Subjt:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGW

A0A5D3BYZ5 Uncharacterized protein9.8e-1859.21Show/hide
Query:  LGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHRGEASGYHSRHHN
        +GCVG   PHNT+ CPLNT+IVA+V+NDPYSNTYN GWR HP F W G    NQGRQG  G++  EA G+  R ++
Subjt:  LGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHRGEASGYHSRHHN

A0A5D3CGY4 Uncharacterized protein1.5e-1346.49Show/hide
Query:  QVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQG-------DHRGEASGYHSRHHN
        QVNA GS V A+ Q+ +LGCVGC+GPHNT+ACP N +I A V+   +SNTYN GWRNHP F W   G +N+  +GG+         H   + G   R H 
Subjt:  QVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQG-------DHRGEASGYHSRHHN

Query:  ------NKPLYLHH
              NKP  L H
Subjt:  ------NKPLYLHH

A0A5D3CSC7 Uncharacterized protein2.4e-1661.54Show/hide
Query:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIF
        M   QVNA  SS Q+V Q+D++GC+    PH  DACPLN +IVA+V++DPYSNTYNP WRNHP F
Subjt:  MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATCGCAAGTTAATGCCACCGGAAGCTCTGTGCAGGCGGTGAATCAAATTGATGATTTGGGATGCGTGGGATGCGACGGTCCTCACAATACTGATGCATGCCC
ACTTAACACTAAGATTGTCGCGTTCGTAAGGAACGACCCCTACTCCAACACCTACAATCCTGGTTGGAGGAATCACCCTATCTTTGGATGGGAAGGAATGGGTCAACAAA
ATCAAGGGCGACAAGGTGGTCAAGGTGATCATCGCGGGGAAGCATCTGGCTACCACTCGAGACACCATAACAACAAACCACTGTATCTCCATCATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATCGCAAGTTAATGCCACCGGAAGCTCTGTGCAGGCGGTGAATCAAATTGATGATTTGGGATGCGTGGGATGCGACGGTCCTCACAATACTGATGCATGCCC
ACTTAACACTAAGATTGTCGCGTTCGTAAGGAACGACCCCTACTCCAACACCTACAATCCTGGTTGGAGGAATCACCCTATCTTTGGATGGGAAGGAATGGGTCAACAAA
ATCAAGGGCGACAAGGTGGTCAAGGTGATCATCGCGGGGAAGCATCTGGCTACCACTCGAGACACCATAACAACAAACCACTGTATCTCCATCATCAATAG
Protein sequenceShow/hide protein sequence
MAISQVNATGSSVQAVNQIDDLGCVGCDGPHNTDACPLNTKIVAFVRNDPYSNTYNPGWRNHPIFGWEGMGQQNQGRQGGQGDHRGEASGYHSRHHNNKPLYLHHQ