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PI0003300 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003300
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationchr06:3142419..3144316
RNA-Seq ExpressionPI0003300
SyntenyPI0003300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049218.1 uncharacterized protein E6C27_scaffold171G004580 [Cucumis melo var. makuwa]1.6e-42100Show/hide
Query:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
KAG6582410.1 hypothetical protein SDJN03_22412, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3685.26Show/hide
Query:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        M GDS+ VNG  E+++DSAAAGEVGDH NGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]5.0e-44100Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
XP_008438475.1 PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]1.6e-42100Show/hide
Query:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]5.6e-4395.79Show/hide
Query:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        MDGDSKDVNGCKEK MDSAA GEVGDHSNGEEYSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein2.4e-44100Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X27.9e-43100Show/hide
Query:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
A0A5A7U1V8 Uncharacterized protein7.9e-43100Show/hide
Query:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
A0A6J1EBY1 uncharacterized protein LOC1114317938.4e-3785.26Show/hide
Query:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        M GDS+ VNG  E+++DSAAAGEVGDH NGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
A0A6J1INK9 uncharacterized protein LOC1114791204.2e-3684.21Show/hide
Query:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        M GDS+ VNG  E+++DSAAAGEVGDH N E+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein4.2e-0446.67Show/hide
Query:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EADSCSCIIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE       SC C IM
Subjt:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EADSCSCIIM
AT1G55475.1 unknown protein4.2e-0444.19Show/hide
Query:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        + + KV+W D  G  LAEI EF+PSD  D   +   +C CII+
Subjt:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
AT2G33390.1 unknown protein8.4e-2150.54Show/hide
Query:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        G+ K+ NGC+ K + S  + E+ D    EE SES  LLPPR+GGMSR  +K +  V+WND  G+NLAE+L ++PS+VSD+ D+++DSC C IM
Subjt:  GDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCGATTCTAAGGATGTTAATGGCTGTAAAGAGAAGACTATGGACTCTGCAGCTGCCGGAGAAGTTGGGGATCACAGTAACGGCGAAGAATACAGTGAATCAAA
TGCTCTATTGCCGCCGCGCCGCGGTGGAATGTCGAGGAAATTGAATAAGCCGAGGATGAAAGTTCGGTGGAATGATAGTAATGGTAATAACCTAGCAGAGATTTTGGAGT
TTCAACCAAGTGACGTGAGTGACTCCGGTGACGAGGAGGCTGATTCTTGCAGCTGTATAATTATGTAG
mRNA sequenceShow/hide mRNA sequence
GCGATCTGTACAACGCATCACTTCATAGCAAATTTCACAATTTTGATTTTTGAGTTAAAATTTCGTTCCGTTATGTTATATTATGAAACCCCCACTGTTTATTTTTTAAT
TTTGAAGATCTTTTCGATTTGGGTTTTGGTGTGGACTTGAGTTTCTGTCACTATCTTCGGAATCTATCTATTCTAATCCCTTCTTTTTTTTTTTTGTTCATAGCTTTGTT
TGCTTGAAATTTTAGATCGGGGGTTTACTTTCCGAGAAGGGTTTTTTGATGGGTTGTTGGGTTCATAAATTTTTGAACCCGTGAGCGTTGACCCAGTTGCGAAATCGGAG
TTTCCAGTAAGAAATTTTCATTTTCTTTTTCATTGGGGTTTAGATGAAGTGGATTTCTGAGATGAGTCGATTCAGAAATCCCAAATCTGGGTCCGATTTTTGGTGTAGTT
GATAGGGTAAAATTTCGATTGGATTTGTAGTTAGTGAAAGTTTTGAACTATGGATGGCGATTCTAAGGATGTTAATGGCTGTAAAGAGAAGACTATGGACTCTGCAGCTG
CCGGAGAAGTTGGGGATCACAGTAACGGCGAAGAATACAGTGAATCAAATGCTCTATTGCCGCCGCGCCGCGGTGGAATGTCGAGGAAATTGAATAAGCCGAGGATGAAA
GTTCGGTGGAATGATAGTAATGGTAATAACCTAGCAGAGATTTTGGAGTTTCAACCAAGTGACGTGAGTGACTCCGGTGACGAGGAGGCTGATTCTTGCAGCTGTATAAT
TATGTAGATTATTACATCAGATATTAGTATATAATGACAAGAACAATGTGGTTGCTTTACGACTAAACTGATAATAATTGGAGATGTTTCTGACTGTATACCGGATTGCT
TTGCTACTACGACGACTGCCAGAAAAGTTCAAAGATCGGTTCATTGATATGTCGTTACACCAAGCGGTTTCAGGCGATGTGTCCCAGTGACATCTTGTACTGTTTCGGTT
TTTTCAAATTAGTAAGATGACCTTCCAGGTGATAATATTCTATATGGATGATGCTGATATATATTGATATTATTAAATCAAACATTCAGATTAGTTGAGCTTTTGACAGT
GCAAATGATACATTGTGTAATGCAAACACTTTGAATTTTTCATATACTTATCATGAATTCTAGAGCTTCTCTTCTCTACCTTTT
Protein sequenceShow/hide protein sequence
MDGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM