; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003312 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003312
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:8947629..8949179
RNA-Seq ExpressionPI0003312
SyntenyPI0003312
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]1.1e-24084.52Show/hide
Query:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY
        GKGKV+V+TAQSSNPVQDTDDP+YPPGFTP H +  Q+QT QHY+AMNPLF VPPPVPDIEQLEAQAKIQDMGQNENT A++KLDVLEERLRAIEGTDVY
Subjt:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY

Query:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA
        GNI+ATQLCLVPGLIIP KFKVP FDKYDGSSCPRSHLIMYCRKMAAHI NDKLLIHCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDMA
Subjt:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA

Query:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK
        PDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMT MFMNTLR PFYDRMIGNATT+FSDIIVIGERIEYGIK+GR+ E + EYGG+K+G T K
Subjt:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK

Query:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ
        KKEGEVH +GFPN G HKS+FGQR+H+Q FPSYI+NV+H+PYNNYVP H+ SG  + VNSN  RPF QGQGSK NS+T+RFDPIPMTYTELLPQL+ NRQ
Subjt:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ

Query:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN
        LAPIP+ PIQPPYPKWYDPNARCDYHAGG GHSTENCLALKRKVQSLINAGWLSFKKA EKPDVNNNPLPNHENSKVN
Subjt:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN

XP_031738857.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]6.6e-24184.52Show/hide
Query:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY
        GKGKV+V+TAQSSNPVQDTDDP+YPPGFTP H +  Q+QT QHY+AMNPLF VPPPVPDIEQLE QAKIQDMGQNENT A++KLDVLEERLRAIEGTDVY
Subjt:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY

Query:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA
        GNI+ATQLCLVPGLIIP KFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI NDKLLIHCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDMA
Subjt:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA

Query:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK
        PDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMT MFMNTLR PFYDRMIGNATT+FSDIIVIGERIEYGIK+GR+ E + EYGG+K+G T K
Subjt:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK

Query:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ
        KKEGEVH +GFPN G HKS+FGQR+H+Q FPSYI+NV+H+PYNNYVP H+ SG  + VNSN  RPF QGQGSK NS+T+RFDPIPMTYTELLPQL+ NRQ
Subjt:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ

Query:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN
        LAPIP+ PIQPPYPKWYDPNARCDYHAGG GHSTENCLALKRKVQSLINAGWLSFKKA EKPDVNNNPLPNHENSKVN
Subjt:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN

XP_031739260.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402917 [Cucumis sativus]2.3e-24184.73Show/hide
Query:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY
        GKGKV+V+TAQSSNPVQDTDDP+YPPGFTP H +  Q+QT QHY+AMNPLF VPPPVPDIEQLEAQAKIQDMGQNENT A++KLDVLEERLRAIEGTDVY
Subjt:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY

Query:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA
        GNI+ATQLCLVPGLIIP KFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI NDKLLIHCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDMA
Subjt:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA

Query:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK
        PDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMT MFMNTLR PFYDRMIGNATT+FSDIIVIGERIEYGIK+GR+ E + EYGG+K+G T K
Subjt:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK

Query:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ
        KKEGEVH +GFPN G HKS+FGQR+H+Q FPSYI+NV+H+PYNNYVP H+ SG  + VNSN  RPF QGQGSK NS+T+RFDPIPMTYTELLPQL+ NRQ
Subjt:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ

Query:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN
        LAPIP+ PIQPPYPKWYDPNARCDYHAGG GHSTENCLALKRKVQSLINAGWLSFKKA EKPDVNNNPLPNHENSKVN
Subjt:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN

XP_031741309.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]6.6e-24184.52Show/hide
Query:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY
        GKGKV+V+TAQSSNPVQDTDDP+YPPGFTP H +  Q+QT QHY+AMNPLF VPPPVPDIEQLE QAKIQDMGQNENT A++KLDVLEERLRAIEGTDVY
Subjt:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY

Query:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA
        GNI+ATQLCLVPGLIIP KFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI NDKLLIHCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDMA
Subjt:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA

Query:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK
        PDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMT MFMNTLR PFYDRMIGNATT+FSDIIVIGERIEYGIK+GR+ E + EYGG+K+G T K
Subjt:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK

Query:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ
        KKEGEVH +GFPN G HKS+FGQR+H+Q FPSYI+NV+H+PYNNYVP H+ SG  + VNSN  RPF QGQGSK NS+T+RFDPIPMTYTELLPQL+ NRQ
Subjt:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ

Query:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN
        LAPIP+ PIQPPYPKWYDPNARCDYHAGG GHSTENCLALKRKVQSLINAGWLSFKKA EKPDVNNNPLPNHENSKVN
Subjt:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN

XP_031742360.1 uncharacterized protein LOC116404324 [Cucumis sativus]2.3e-24184.73Show/hide
Query:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY
        GKGKV+V+TAQSSNPVQDTDDP+YPPGFTP H +  Q+QT QHY+AMNPLF VPPPVPDIEQLEAQAKIQDMGQNENT A++KLDVLEERLRAIEGTDVY
Subjt:  GKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVY

Query:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA
        GNI+ATQLCLVPGLIIP KFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI NDKLLIHCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDMA
Subjt:  GNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDMA

Query:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK
        PDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMT MFMNTLR PFYDRMIGNATT+FSDIIVIGERIEYGIK+GR+ E + EYGG+K+G T K
Subjt:  PDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSK

Query:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ
        KKEGEVH +GFPN G HKS+FGQR+H+Q FPSYI+NV+H+PYNNYVP H+ SG  + VNSN  RPF QGQGSK NS+T+RFDPIPMTYTELLPQL+ NRQ
Subjt:  KKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQ

Query:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN
        LAPIP+ PIQPPYPKWYDPNARCDYHAGG GHSTENCLALKRKVQSLINAGWLSFKKA EKPDVNNNPLPNHENSKVN
Subjt:  LAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein3.5e-24083.96Show/hide
Query:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV
        MGKGK +VDTAQSSNP+QDTDDP+YPPGFTP H +VPQ+QTTQHY+  NPL+ VPP +P IE LEAQAKIQDM QNENT A++KLDVLEERLRAIE TDV
Subjt:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV

Query:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM
        YGNI+ATQLCLVPGLIIPAKFKVPEFDKYDGS+CPRSHLIMYCRKMA HI+NDKLL+HCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDM
Subjt:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM

Query:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS
        APDRLDLQR+EK+SSESFKEYAQRWRD  AEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDIIVIGERIEYGIK+GR+AEATTEYGGIK+G  S
Subjt:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS

Query:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR
        KKKEGEVH +GFPNSGKHKS FGQR++EQ FPSYI+NVSH+PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQNR
Subjt:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR

Query:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNV
        QLA IPMIPIQPPYPKWYD NARCDYHAGG GHSTENCLALKR VQSLINAGWLSFKK+ EK +V  NPLP+HEN KVNV
Subjt:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNV

A0A5A7T1W2 Retrotrans_gag domain-containing protein3.3e-21477.5Show/hide
Query:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV
        MGKGK  VDT QSSNP+QDTDDP+YPPGFTP H +VP+ +       +N +F                            +++KLDVLEERLRAIE TDV
Subjt:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV

Query:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM
        YGNI+ATQLCLVPGLIIPAKFKVPEF+KYDGS+CPRSHLIMYCRKMA HI+NDKLL+HCFQDSLT          DNAHIHVWKDLADAFLKQYK NIDM
Subjt:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM

Query:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS
        APDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDIIVIGERIEYGIK+GR+AEATTEYGGIK+G  S
Subjt:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS

Query:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR
        KKKEGEVH +GFPNSGKHKS FG R++EQ FPSYINNVSH+PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQNR
Subjt:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR

Query:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNV
        QLA IPMIPIQPPYPKWYD NARCDYHAGG GHSTENCLALKR VQSLINAGWLSFKK+ EK +VN NPLP+ EN KVNV
Subjt:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNV

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein3.4e-23582.88Show/hide
Query:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV
        MGKGK +VDTAQSSNP+QDTDDP+YPPGFTP H +VPQ+QTTQHY+  NPL+ VPP +P IE LEAQAKIQDM QNENT A++KLDVLEERLRAIE TDV
Subjt:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV

Query:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM
        YGNI+ATQLCLVPGLIIPAKFKVPEFDKYDGS+CPRSHLIMY RKMA HI+NDKLL+HCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDM
Subjt:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM

Query:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS
        APD LDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDIIVIGERIEYGIK+GR+AEATTEYG IK+G  S
Subjt:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS

Query:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR
        KKKEGEVH +GFPNSGKHKS FGQR++EQ FPSYI+NVSH+PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTE+LPQLIQNR
Subjt:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR

Query:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN
        QLA IPMIPIQPPY KWYD NARCDYHAGG GHS ENCLALKR VQSLIN GWLSFKK+ EK +V  NPLP+HEN KVN
Subjt:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN

A0A5A7V3W7 Retrotrans_gag domain-containing protein2.7e-24083.92Show/hide
Query:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV
        MGKGKV VDT QSSNP+QDTDDP+YPP FTP H +VPQ+QTTQHYI  +PL+ VPP VP +E LEAQAKIQDMGQNENT A++KLDVLEERLRAIEGTDV
Subjt:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV

Query:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM
        YGNI+ATQLCLVPGLIIPAKFKVPEFDKYDGS+CPRSHLIMYCRKMA HI+NDKLL+HCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDM
Subjt:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM

Query:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS
        AP+RLDLQRMEK+SSESFKEYAQRW+D  AEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDIIVIGERIEYGIK+GR+AE TTEYGGIK+G  S
Subjt:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS

Query:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR
        KKKEGE+H +GFPNSGKHKS FGQR++EQ FPSYI+NVS++PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQNR
Subjt:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR

Query:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN
        QLAPIPMIPIQPPYPKWYD NARCDYHAGG GHSTENC ALKR VQSLINAGWLSFKK+ EKP+VN NPLPNHEN KVN
Subjt:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVN

A0A5D3DJ57 Retrotrans_gag domain-containing protein9.7e-21476.88Show/hide
Query:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV
        MGKGKV VDT QSSNP+QDTDDP+YP GFTP H +VPQ+QTTQHYI  NP++ VPP VP IE L                               EGTDV
Subjt:  MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDV

Query:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM
        YGNI+ATQLCLVPGLIIPAKFKVPEFDKYD S+CPRS LIMYCRKMA HI+ DKLL+HCFQDSLT          DNAHIHVWKDLADAFLKQYKHNIDM
Subjt:  YGNINATQLCLVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLT----------DNAHIHVWKDLADAFLKQYKHNIDM

Query:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS
         PD LDLQRMEK+SS+SFKEYAQRWRD   EVQPPLTDKEMT +FMNTLR PFY+RMIGNA+T+FSDIIVIGERIEYGIK+GR+AEATTEYGGIK+G  S
Subjt:  APDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTS

Query:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR
        KKKEGEVH +GFPNSGKHKS F QR++EQ FPSYI+NVSH+PYN+YVPAHT S TS+PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQNR
Subjt:  KKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNR

Query:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNV
        QLAPIPMIPIQPPYPKWYD NARCDYHAGG  HSTENCLALKR VQ LINAGWLSFKK+ EKP+V  NPLP+HEN KVNV
Subjt:  QLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAGGGAAGGTCATTGTAGATACAGCACAATCAAGCAATCCAGTTCAGGACACCGATGATCCCCTTTATCCTCCAGGGTTTACACCATCTCACACGCATGTTCC
GCAGGCTCAAACCACTCAACACTATATTGCTATGAATCCACTTTTTGCTGTTCCACCTCCTGTCCCAGATATAGAGCAATTGGAAGCTCAAGCTAAAATTCAAGATATGG
GGCAAAATGAGAACACTTCGGCTAGGGAAAAACTAGATGTTTTGGAAGAAAGGCTACGAGCAATTGAAGGGACTGACGTTTATGGAAATATTAATGCAACACAACTCTGT
TTGGTGCCGGGCTTGATAATTCCAGCAAAGTTTAAAGTTCCTGAATTTGATAAATATGATGGATCCTCGTGTCCGAGAAGTCATCTTATAATGTACTGTAGAAAGATGGC
AGCGCATATTAGCAATGATAAATTGTTGATCCATTGCTTCCAAGATAGTTTGACTGACAATGCACACATTCATGTTTGGAAAGATTTAGCTGATGCATTTTTAAAGCAAT
ACAAACATAATATTGATATGGCTCCAGATCGTTTAGACTTGCAACGGATGGAGAAGAGGAGTTCTGAAAGTTTCAAAGAATATGCTCAACGATGGAGAGACAAGGCCGCT
GAGGTTCAGCCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACTTTACGAACTCCATTCTATGATCGGATGATTGGTAATGCAACAACGAGCTTTTCTGA
CATTATTGTTATTGGTGAAAGAATTGAATATGGGATAAAGTACGGGAGGATAGCAGAGGCTACAACTGAATATGGAGGAATAAAGAGAGGACCAACATCTAAGAAGAAGG
AAGGAGAGGTTCATACAGTTGGTTTTCCTAATTCAGGGAAACACAAATCGAGTTTTGGGCAAAGAGAACATGAGCAAGGTTTTCCATCATATATAAACAATGTTTCTCAT
GTCCCTTACAACAACTATGTACCAGCTCACACCTTCTCTGGAACTTCAAGGCCTGTTAACTCAAACTCTCCTCGACCATTTGCACAAGGTCAAGGTAGCAAAGCCAATTC
AGATACTTGGCGATTTGATCCAATTCCCATGACCTATACAGAGCTTTTACCCCAACTAATTCAAAATCGACAGTTAGCTCCTATTCCAATGATCCCTATACAACCTCCTT
ATCCAAAATGGTATGATCCAAATGCTCGATGTGATTATCATGCTGGAGGGGCAGGACACTCAACTGAAAATTGTTTGGCTTTGAAAAGGAAGGTGCAATCTTTGATTAAT
GCTGGATGGTTAAGCTTTAAGAAAGCTAGTGAGAAGCCAGATGTCAATAATAATCCACTCCCTAATCATGAAAATTCAAAGGTGAATGTTCACTTTTTGAAAGTCTTTTT
GAAGCAGGATATGTTGATAAGGAATATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAAGGGAAGGTCATTGTAGATACAGCACAATCAAGCAATCCAGTTCAGGACACCGATGATCCCCTTTATCCTCCAGGGTTTACACCATCTCACACGCATGTTCC
GCAGGCTCAAACCACTCAACACTATATTGCTATGAATCCACTTTTTGCTGTTCCACCTCCTGTCCCAGATATAGAGCAATTGGAAGCTCAAGCTAAAATTCAAGATATGG
GGCAAAATGAGAACACTTCGGCTAGGGAAAAACTAGATGTTTTGGAAGAAAGGCTACGAGCAATTGAAGGGACTGACGTTTATGGAAATATTAATGCAACACAACTCTGT
TTGGTGCCGGGCTTGATAATTCCAGCAAAGTTTAAAGTTCCTGAATTTGATAAATATGATGGATCCTCGTGTCCGAGAAGTCATCTTATAATGTACTGTAGAAAGATGGC
AGCGCATATTAGCAATGATAAATTGTTGATCCATTGCTTCCAAGATAGTTTGACTGACAATGCACACATTCATGTTTGGAAAGATTTAGCTGATGCATTTTTAAAGCAAT
ACAAACATAATATTGATATGGCTCCAGATCGTTTAGACTTGCAACGGATGGAGAAGAGGAGTTCTGAAAGTTTCAAAGAATATGCTCAACGATGGAGAGACAAGGCCGCT
GAGGTTCAGCCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACTTTACGAACTCCATTCTATGATCGGATGATTGGTAATGCAACAACGAGCTTTTCTGA
CATTATTGTTATTGGTGAAAGAATTGAATATGGGATAAAGTACGGGAGGATAGCAGAGGCTACAACTGAATATGGAGGAATAAAGAGAGGACCAACATCTAAGAAGAAGG
AAGGAGAGGTTCATACAGTTGGTTTTCCTAATTCAGGGAAACACAAATCGAGTTTTGGGCAAAGAGAACATGAGCAAGGTTTTCCATCATATATAAACAATGTTTCTCAT
GTCCCTTACAACAACTATGTACCAGCTCACACCTTCTCTGGAACTTCAAGGCCTGTTAACTCAAACTCTCCTCGACCATTTGCACAAGGTCAAGGTAGCAAAGCCAATTC
AGATACTTGGCGATTTGATCCAATTCCCATGACCTATACAGAGCTTTTACCCCAACTAATTCAAAATCGACAGTTAGCTCCTATTCCAATGATCCCTATACAACCTCCTT
ATCCAAAATGGTATGATCCAAATGCTCGATGTGATTATCATGCTGGAGGGGCAGGACACTCAACTGAAAATTGTTTGGCTTTGAAAAGGAAGGTGCAATCTTTGATTAAT
GCTGGATGGTTAAGCTTTAAGAAAGCTAGTGAGAAGCCAGATGTCAATAATAATCCACTCCCTAATCATGAAAATTCAAAGGTGAATGTTCACTTTTTGAAAGTCTTTTT
GAAGCAGGATATGTTGATAAGGAATATTTAG
Protein sequenceShow/hide protein sequence
MGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQTTQHYIAMNPLFAVPPPVPDIEQLEAQAKIQDMGQNENTSAREKLDVLEERLRAIEGTDVYGNINATQLC
LVPGLIIPAKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLTDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKRSSESFKEYAQRWRDKAA
EVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIVIGERIEYGIKYGRIAEATTEYGGIKRGPTSKKKEGEVHTVGFPNSGKHKSSFGQREHEQGFPSYINNVSH
VPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPIQPPYPKWYDPNARCDYHAGGAGHSTENCLALKRKVQSLIN
AGWLSFKKASEKPDVNNNPLPNHENSKVNVHFLKVFLKQDMLIRNI