; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003323 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003323
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description30S ribosomal protein S21
Genome locationchr12:2938595..2940986
RNA-Seq ExpressionPI0003323
SyntenyPI0003323
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21
IPR038380 - Ribosomal protein S21 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055302.1 Ribosomal_S21 domain-containing protein [Cucumis melo var. makuwa]1.1e-6571.43Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSINFQSLPK+K+TRLFASRG+V SSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFR QV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSITEEQPDQKTLQSKNRD
        KRRRFFENSQAKRKRKAREAAKRNRKR                                                 RFRRPQS TE+QPD+KT +SKN+D
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSITEEQPDQKTLQSKNRD

Query:  EEDDNWDFYQVDLPYSS
        EEDDNWDFYQVDLPYSS
Subjt:  EEDDNWDFYQVDLPYSS

TYJ99226.1 putative Ribosomal protein S21 family protein [Cucumis melo var. makuwa]1.1e-6571.43Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSINFQSLPK+K+TRLFASRG+V SSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFR QV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSITEEQPDQKTLQSKNRD
        KRRRFFENSQAKRKRKAREAAKRNRKR                                                 RFRRPQS TE+QPD+KT +SKN+D
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSITEEQPDQKTLQSKNRD

Query:  EEDDNWDFYQVDLPYSS
        EEDDNWDFYQVDLPYSS
Subjt:  EEDDNWDFYQVDLPYSS

XP_004152510.2 30S ribosomal protein S21, chloroplastic [Cucumis sativus]6.6e-7191.62Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSIN QSLP +K TRLFASRG+V SSSQEPKGV  RILNYN+LITVGENESEDQVVNRFRRQV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSIT EQPDQKT +SKNRDEEDDNWDFYQVDLPYS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYS

XP_008439325.1 PREDICTED: uncharacterized protein LOC103484145 [Cucumis melo]1.2e-7292.26Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSINFQSLPK+K+TRLFASRG+V SSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFR QV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQS TE+QPD+KT +SKN+DEEDDNWDFYQVDLPYSS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS

XP_038894121.1 30S ribosomal protein S21, chloroplastic-like [Benincasa hispida]5.0e-6384.52Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSS+T  FS LSISKSSQIHHNSVSIN QSLPK+K  RLFA+RGSV  SSQEPKGV S +  YNVLITVGENESEDQ+VNRFRRQV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS
        KRRRFFENSQAKRKRKAREAAKRNRKR FRRPQS  EEQP++KT Q KNRDEEDDNWDFYQVDLPY S
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ6 Uncharacterized protein3.2e-7191.62Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSIN QSLP +K TRLFASRG+V SSSQEPKGV  RILNYN+LITVGENESEDQVVNRFRRQV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSIT EQPDQKT +SKNRDEEDDNWDFYQVDLPYS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYS

A0A1S3AZ70 uncharacterized protein LOC1034841455.8e-7392.26Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSINFQSLPK+K+TRLFASRG+V SSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFR QV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQS TE+QPD+KT +SKN+DEEDDNWDFYQVDLPYSS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS

A0A5A7UHJ6 Ribosomal_S21 domain-containing protein5.2e-6671.43Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSINFQSLPK+K+TRLFASRG+V SSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFR QV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSITEEQPDQKTLQSKNRD
        KRRRFFENSQAKRKRKAREAAKRNRKR                                                 RFRRPQS TE+QPD+KT +SKN+D
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSITEEQPDQKTLQSKNRD

Query:  EEDDNWDFYQVDLPYSS
        EEDDNWDFYQVDLPYSS
Subjt:  EEDDNWDFYQVDLPYSS

A0A5D3BJF5 Putative Ribosomal protein S21 family protein5.2e-6671.43Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSINFQSLPK+K+TRLFASRG+V SSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFR QV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSITEEQPDQKTLQSKNRD
        KRRRFFENSQAKRKRKAREAAKRNRKR                                                 RFRRPQS TE+QPD+KT +SKN+D
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKR-------------------------------------------------RFRRPQSITEEQPDQKTLQSKNRD

Query:  EEDDNWDFYQVDLPYSS
        EEDDNWDFYQVDLPYSS
Subjt:  EEDDNWDFYQVDLPYSS

E5GBW8 Structural constituent of ribosome5.8e-7392.26Show/hide
Query:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC
        MAAAATSSITN FSFLSISKSSQIHHNSVSINFQSLPK+K+TRLFASRG+V SSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFR QV RAGILQEC
Subjt:  MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS
        KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQS TE+QPD+KT +SKN+DEEDDNWDFYQVDLPYSS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS

SwissProt top hitse value%identityAlignment
P82024 30S ribosomal protein S21, chloroplastic2.4e-1548.04Show/hide
Query:  YNVLITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRR---FRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDL
        YNV + V +NE+E++++NRFRR+V RAG++QECKRRR+FEN Q ++KRK REAAKRN +RR   FR P    EE       +   ++++ DNWD  +   
Subjt:  YNVLITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRR---FRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDL

Query:  PY
        P+
Subjt:  PY

Q1WU25 30S ribosomal protein S211.4e-0448.21Show/hide
Query:  VGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRF
        V +NES D  + RF+R V + G LQE ++R F+E    KRK+K+  A KR  KRRF
Subjt:  VGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRF

Q2JM43 30S ribosomal protein S211.4e-0448.21Show/hide
Query:  ITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR
        +T+GENE  +  + RF+RQV +AGIL++ +  R FE +  KRKRKA  A +RNR++
Subjt:  ITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR

Q7NHA1 30S ribosomal protein S21 28.5e-0548.15Show/hide
Query:  ITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNR
        + +GENES +  + RF++++ +AGIL E KRR  +E   A+RKRKA  A KR R
Subjt:  ITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNR

Q8RB59 30S ribosomal protein S216.5e-0549.09Show/hide
Query:  ITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK
        + VGENES D  + RFRRQ  +AG+L E ++R  +E+   KRK+KA  A KR  K
Subjt:  ITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK

Arabidopsis top hitse value%identityAlignment
AT3G27160.1 Ribosomal protein S21 family protein6.2e-1939.13Show/hide
Query:  AATSSITNIFSFLSISKS-----------------SQIHHNSVSINFQSLPKTKRT--RLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVV
        AA+ S+T+  SF+S  KS                 SQ   N ++I   ++ +T  T   L +   SV   S            YNV + V +NESE+++V
Subjt:  AATSSITNIFSFLSISKS-----------------SQIHHNSVSINFQSLPKTKRT--RLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVV

Query:  NRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQS-ITEEQPDQ--KTLQSKNRDEEDDNWDFYQVDLP
        NRFRR+V R G++QECKRRR+FEN Q ++KR+ R+AAKRN+K   RRPQ+  T+E  ++     +SK +DEE+DNW+    D+P
Subjt:  NRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRFRRPQS-ITEEQPDQ--KTLQSKNRDEEDDNWDFYQVDLP

AT5G63300.1 Ribosomal protein S21 family protein3.0e-1341.35Show/hide
Query:  YNVLITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRFR-RPQSITEEQPDQKTLQSKNRDEEDDNWDF--YQVDL
        YNV +   + ESE+Q+VN F+R  +RAG+LQE +RRRFFE+S  K+ RK +EAAK+ RKRR   +P+ ++  +  +    +   DE+DD+W+     +++
Subjt:  YNVLITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRRFR-RPQSITEEQPDQKTLQSKNRDEEDDNWDF--YQVDL

Query:  PYSS
        PY++
Subjt:  PYSS

AT5G63300.2 Ribosomal protein S21 family protein3.1e-1056.67Show/hide
Query:  YNVLITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR
        YNV +   + ESE+Q+VN F+R  +RAG+LQE +RRRFFE+S  K+ RK +EAAK+ RKR
Subjt:  YNVLITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCTGCAACTTCATCTATCACGAATATCTTCTCCTTCCTCTCAATCTCGAAATCATCACAAATACACCATAACTCCGTCTCTATAAACTTCCAGTCTCTTCC
AAAGACTAAACGGACTCGGTTGTTTGCCTCCAGGGGCTCTGTTCCATCTTCTTCCCAAGAACCTAAGGGTGTTTCCTCACGCATTTTAAATTATAATGTTCTGATCACCG
TGGGTGAGAATGAGTCTGAAGACCAGGTGGTGAATCGGTTTAGGAGACAGGTCTGGAGAGCAGGAATTTTGCAGGAGTGCAAGAGGAGAAGATTTTTCGAAAATAGCCAG
GCAAAGAGAAAGAGGAAAGCTAGGGAAGCTGCTAAGAGGAATCGCAAGAGAAGGTTTAGGAGGCCTCAATCAATAACTGAGGAGCAGCCAGACCAGAAAACCCTTCAGAG
TAAGAATAGAGATGAGGAAGATGACAACTGGGACTTTTACCAAGTAGACCTTCCATACAGTTCATAA
mRNA sequenceShow/hide mRNA sequence
CCGGTCCGAACAGGAAGTGGAAGACGGAGCACCGGTGAGTCGCCATGGCCGCCGCTGCAACTTCATCTATCACGAATATCTTCTCCTTCCTCTCAATCTCGAAATCATCA
CAAATACACCATAACTCCGTCTCTATAAACTTCCAGTCTCTTCCAAAGACTAAACGGACTCGGTTGTTTGCCTCCAGGGGCTCTGTTCCATCTTCTTCCCAAGAACCTAA
GGGTGTTTCCTCACGCATTTTAAATTATAATGTTCTGATCACCGTGGGTGAGAATGAGTCTGAAGACCAGGTGGTGAATCGGTTTAGGAGACAGGTCTGGAGAGCAGGAA
TTTTGCAGGAGTGCAAGAGGAGAAGATTTTTCGAAAATAGCCAGGCAAAGAGAAAGAGGAAAGCTAGGGAAGCTGCTAAGAGGAATCGCAAGAGAAGGTTTAGGAGGCCT
CAATCAATAACTGAGGAGCAGCCAGACCAGAAAACCCTTCAGAGTAAGAATAGAGATGAGGAAGATGACAACTGGGACTTTTACCAAGTAGACCTTCCATACAGTTCATA
AAGGTCACTGCCTTGAAAGAATGAAACCAATATTTGTAATGGATGAAAAGAATTACTAGATGATTAGTGTATTTTACTTGGTAGTATTTAGTTTAGTTGGTAATTTAGAA
TTAATTAGTTAATTGTCAAAGCTATAAATAGCTACTTTAGGTTGTAATATGAAGCTTTTCAATTACCATTTGGAAAATAGAATTGTTCTTGGGAGAACTCTCTTTGAATC
TTTTGTTTGGCTATGGACTTGGCATAATATCTCTACATGTTGTATTAGTAACACGTTGATGTTAATGTCATTGAAG
Protein sequenceShow/hide protein sequence
MAAAATSSITNIFSFLSISKSSQIHHNSVSINFQSLPKTKRTRLFASRGSVPSSSQEPKGVSSRILNYNVLITVGENESEDQVVNRFRRQVWRAGILQECKRRRFFENSQ
AKRKRKAREAAKRNRKRRFRRPQSITEEQPDQKTLQSKNRDEEDDNWDFYQVDLPYSS