; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003333 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003333
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationchr10:16013404..16018963
RNA-Seq ExpressionPI0003333
SyntenyPI0003333
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461655.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo]6.6e-14898.25Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
        HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQ  NGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

XP_022987464.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima]2.3e-14093.68Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
        HADYP SPRGA RERD ERSRQVYSPGYDNAD  D +GNGNGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

XP_023549438.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita pepo subsp. pepo]4.0e-13792.33Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDVERSRQVYSPGYDNAD--EHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
        HADYP SPRGA RERD ERSRQVYSPGYDNAD  + D NGNGNGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPESPRGAPRERDVERSRQVYSPGYDNAD--EHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

XP_038892246.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida]1.1e-14295.14Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHY---GRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHY   GRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHY---GRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
         RRHADYPESPRG PRERD ER+RQVYSPGYDNAD+H  N NGNGYHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHGR
Subjt:  GRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

XP_038892248.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida]2.6e-14496.14Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
        HADYPESPRG PRERD ER+RQVYSPGYDNAD+H  N NGNGYHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

TrEMBL top hitse value%identityAlignment
A0A0A0KNV5 RRM domain-containing protein1.4e-14095.14Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-GGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY GGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-GGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV

Query:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR
        DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR
Subjt:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR

Query:  RHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKS-GFEGED-ARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
        RH DYPESPRGAPRERDVERSRQVYSPGYDNADEH Q  NGNGYHDKS   E +D  R NWR+SPGRTSRSPSGSRSRSADASPRHGR
Subjt:  RHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKS-GFEGED-ARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL303.2e-14898.25Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
        HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQ  NGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

A0A6J1CBL6 serine/arginine-rich SC35-like splicing factor SCL301.2e-13490.03Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNW------RSSPGRTSRSPSGSRSRSADASPRHGR
        HADYP SPRGAP ERD ERS+Q YSPGYDNAD HD   +GNGYHDKS FEG D R NW      RSSPGR SRSPSGSRSRSADASPRHGR
Subjt:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNW------RSSPGRTSRSPSGSRSRSADASPRHGR

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL307.4e-13791.58Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
        HADYP SPRGA RERD ER+RQVYSPGYDNAD  D +GNGNGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL301.1e-14093.68Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
        HADYP SPRGA RERD ERSRQVYSPGYDNAD  D +GNGNGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL286.4e-2139.39Show/hide
Query:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAF
        R YS  P   SPP  R+GY        P  R +   G  G                LL+RN+P+D RP +LR  FERFG ++D+Y+P++YYTGEPRGF F
Subjt:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAF

Query:  VEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSV
        V++    +A+EA   MN K   GREI +V A E+RK P++MR       +G  GR   Y R+  RS  R    R+ S SRSR   R  S   + R D   
Subjt:  VEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSV

Query:  SPGRRHADYPESPRGAPRERDVERSRQVYSP
        SP RR      SP   PR     +SR   SP
Subjt:  SPGRRHADYPESPRGAPRERDVERSRQVYSP

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL309.1e-7662.89Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFV
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG       RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFV
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFV

Query:  EFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSV
        EFVD Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRSRSYSPAPR RG    
Subjt:  EFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSV

Query:  SPGRRHADYPESPRGAPRERDVERSRQVYSPGYDN----ADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR
                    PRG   E D   SR+ YSPGY+     A + D+NG+ N   +K G+E ED R   R+     SRSPSGSRSRS + SPR
Subjt:  SPGRRHADYPESPRGAPRERDVERSRQVYSPGYDN----ADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR

Q9BRL6 Serine/arginine-rich splicing factor 83.0e-1838.68Show/hide
Query:  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GY
        +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  M+G +  GRE+ V +A   R+   + RQ   RG S   GY
Subjt:  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GY

Query:  GGRRSHYGR----SRSRSVSRSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR----HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNG
        G R   YGR     R R  SRSR P    S SRSRYR   YS +P  R  YS S   R     + Y ES  G         S   YS  Y ++  H ++G
Subjt:  GGRRSHYGR----SRSRSVSRSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR----HADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNG

Query:  NGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASP
        +       S  +   AR   RS     SRS S SRS S   SP
Subjt:  NGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASP

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A2.0e-3040.42Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP
        R Y+P   SPP RGYG RGRSP  RG  GG            R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRH
         +A+EA++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+            P +RH
Subjt:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRH

Query:  ADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEG---EDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
            +S   +P++R  E+ R      Y  +  H      NG   +SG  G     +R   RS   R +RS +  ++RS    PR  R
Subjt:  ADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEG---EDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.8e-3144.84Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP
        R Y+P   SPP RGYG RGRSP  RG  G           GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRH
         +A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS          GDY   P RRH
Subjt:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRH

Query:  ADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR
             SPR    ER   R     SP  D +    +  +      KS       R +   SP R SRSPS  R+RS   SPR
Subjt:  ADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 331.3e-3244.84Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP
        R Y+P   SPP RGYG RGRSP  RG  G           GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRH
         +A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS          GDY   P RRH
Subjt:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRH

Query:  ADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR
             SPR    ER   R     SP  D +    +  +      KS       R +   SP R SRSPS  R+RS   SPR
Subjt:  ADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR

AT1G55310.2 SC35-like splicing factor 331.0e-3449.53Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP
        R Y+P   SPP RGYG RGRSP  RG  G           GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRR
         +A++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP   
Subjt:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRR

Query:  HAD----YPESP
          D    Y  SP
Subjt:  HAD----YPESP

AT1G55310.3 SC35-like splicing factor 334.1e-3143.34Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG------------E
        R Y+P   SPP RGYG RGRSP  RG  G           GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG            +
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG------------E

Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRW
        PRGF FV+F+DP +A++A++HM+G    GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P   RSR RS         
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRW

Query:  RGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR
         GDY   P RRH     SPR    ER   R     SP  D +    +  +      KS       R +   SP R SRSPS  R+RS   SPR
Subjt:  RGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR

AT3G13570.1 SC35-like splicing factor 30A1.4e-3140.42Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP
        R Y+P   SPP RGYG RGRSP  RG  GG            R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRH
         +A+EA++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+            P +RH
Subjt:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRH

Query:  ADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEG---EDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
            +S   +P++R  E+ R      Y  +  H      NG   +SG  G     +R   RS   R +RS +  ++RS    PR  R
Subjt:  ADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGNGYHDKSGFEG---EDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR

AT3G55460.1 SC35-like splicing factor 306.5e-7762.89Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFV
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG       RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFV
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFV

Query:  EFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSV
        EFVD Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRSRSYSPAPR RG    
Subjt:  EFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSV

Query:  SPGRRHADYPESPRGAPRERDVERSRQVYSPGYDN----ADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR
                    PRG   E D   SR+ YSPGY+     A + D+NG+ N   +K G+E ED R   R+     SRSPSGSRSRS + SPR
Subjt:  SPGRRHADYPESPRGAPRERDVERSRQVYSPGYDN----ADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGATACAGTCCACCTTACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGGGGTGGTGGCGGTGG
TGGCGGTGGGTATGGAAGACGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCATTTGAGAGGTTTG
GACTTGTTCGAGATGTGTATATTCCAAAGGACTATTACACAGGTGAACCTCGAGGATTTGCGTTTGTGGAGTTTGTTGATCCTTATGAGGCTTCTGAAGCCCAGTACCAT
ATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCTGGCTA
TGGTGGACGCCGTTCTCATTATGGACGTTCTAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTCTTACT
CTCCAGCTCCGAGATGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGATTACCCTGAATCACCCAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGC
CGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGAAATGGATATCATGACAAGTCCGGATTTGAAGGGGAGGATGCACGAGGTAA
TTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCTTCGGGGTCCCGATCCCGCTCTGCTGATGCATCCCCCAGACACGGTAGATGA
mRNA sequenceShow/hide mRNA sequence
CTTGCGATACCTGGATTCACTATTTCGTTTATGGATGTATATCTAGATGATTCTTGATCGAACCCTAAACCCATAGTTGTTTACCGCTACTTTCTTTGTTTCGATCATTC
CGAATTAGCTGTTTACCTTCACTCTTAGTTTGAATTATCTCTTTGCGTTTCTTTAGGTCAAAGAATTGGGAAAAAAGGTTGAAACATGAGAAGATACAGTCCACCTTACC
ATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGGGGTGGTGGCGGTGGTGGCGGTGGGTATGGAAGACGAAGG
GAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATTCC
AAAGGACTATTACACAGGTGAACCTCGAGGATTTGCGTTTGTGGAGTTTGTTGATCCTTATGAGGCTTCTGAAGCCCAGTACCATATGAATGGGAAAAAATTTGCTGGTA
GGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCTGGCTATGGTGGACGCCGTTCTCATTATGGA
CGTTCTAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTCTTACTCTCCAGCTCCGAGATGGCGAGGCGA
CTATTCTGTTTCCCCTGGTAGAAGGCACGCAGATTACCCTGAATCACCCAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATG
ATAATGCTGATGAGCACGATCAGAATGGAAATGGAAATGGATATCATGACAAGTCCGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACA
TCAAGATCCCCTTCGGGGTCCCGATCCCGCTCTGCTGATGCATCCCCCAGACACGGTAGATGATTTTTCTTTGAGAAAATATGACAGTAGATGATGTAAACCATCTTTTC
TAATATAAAACATTTATTATTATCCACTATCCGGAAAAGTTTTTAGATTGTATTTTGTACGATGTTCTTAGGTGTCTTGGGATTTTCTAGACGGGGAATTTTATTTGCTC
TCATTTGAAGTTCAAAAAATATTATGCTACTTTTCTGGATTACCGATGCTATATGGTTCTCTGCCTATCTCATTATTCATTAGCATCATCGACGAAACCGCGGCCCTTCT
CATTCAATACGTGCTATCAACATAAAAATTTTGATCTCTGCAGGGTTACTCTCAACCATCTTGACTTGGTTGAATTTATTTGGAAAAATGTGATTTAAGGCTTCTTTTAA
AAGTTGTAATGTTCCTCCTATTTCTATTTTTTTCGTGACTTTCAAAACTATCTTTGAG
Protein sequenceShow/hide protein sequence
MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH
MNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERS
RQVYSPGYDNADEHDQNGNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR