; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003339 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003339
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr02:19450399..19451829
RNA-Seq ExpressionPI0003339
SyntenyPI0003339
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7052657.1 unnamed protein product [Microthlaspi erraticum]7.0e-2140.14Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTH---GPWISRP
        MCLPK LEGL FRD   FN+AL+AKQ  ++L  PN L++++LK +YFP    L     N  S+ WR  VWGRELL+ G+++R+GNG +       WI   
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTH---GPWISRP

Query:  SLFKPIR---PPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEEI
         L  P R   P +++L+ +  +  H     R WN  +LR +   E++
Subjt:  SLFKPIR---PPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEEI

XP_021808571.1 uncharacterized protein LOC110752263 [Prunus avium]5.4e-2139.86Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLST---HGPWISRP
        +C  K+L GL FR+ E FN+AL+AKQV RV  +PN L +++ + +YFP G+VL+A      SF WR  +WGRELL  G++ R+GNGL        W+  P
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLST---HGPWISRP

Query:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE
         LF+   PP + L      V   I    HW+ + +  S  + E
Subjt:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]4.1e-2948.95Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTH---GPWISRP
        MCLPKEL GLNFRD EGFN+AL+AKQV RVL +PN+L+S+VLK KYF    VL+A +    S+FW+GF+WGR+LL  G++ R+GNG + +    PWI RP
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTH---GPWISRP

Query:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE
          F+PI  P     V+   VA  I  +  W++  +     EE+
Subjt:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.5e-2848.25Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHG---PWISRP
        MC PKE  GLNFRD EGFN+AL+AK V R L  PNLL+SKVLK KYF   S+L+A N++  S+FW+GF+WGR+LL  G++ R+GNG +      PW+ RP
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHG---PWISRP

Query:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE
        + FKP+R  +  L      VA FI    +W++  +  S   E+
Subjt:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]2.8e-2245.86Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTH---GPWISRP
        +C  K   GL FR F  +N+AL+AKQ  RVL +P  +L++VLK +YFP+ S LEA  S+  S  WRG VWG+ELL  G++RRIGNG +T     PWI RP
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTH---GPWISRP

Query:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLD
          F PI     +L+    +V+  I     WN+D
Subjt:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLD

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047872.0e-2948.95Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTH---GPWISRP
        MCLPKEL GLNFRD EGFN+AL+AKQV RVL +PN+L+S+VLK KYF    VL+A +    S+FW+GF+WGR+LL  G++ R+GNG + +    PWI RP
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTH---GPWISRP

Query:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE
          F+PI  P     V+   VA  I  +  W++  +     EE+
Subjt:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE

A0A6J1DX30 uncharacterized protein LOC1110248741.7e-2848.25Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHG---PWISRP
        MC PKE  GLNFRD EGFN+AL+AK V R L  PNLL+SKVLK KYF   S+L+A N++  S+FW+GF+WGR+LL  G++ R+GNG +      PW+ RP
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHG---PWISRP

Query:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE
        + FKP+R  +  L      VA FI    +W++  +  S   E+
Subjt:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEE

A0A803NPU7 Uncharacterized protein1.5e-2426.61Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNG---LSTHGPWISRP
        +C PK   G+ F+ F  FN+A++AKQ  RV S+P  LLS++LK +YF   S L +   +  S  W+G VWG+ELL  G++ ++G+G   L    PWI   
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNG---LSTHGPWISRP

Query:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEEILLKHYETILHVRKRIGDFAELCFVSVDSLSTLHWRSGALGVRKFQHPICQLPRI--
          FKP++  S+      H V+ FI   RHWNL+ L  +      L+   E IL +   I   ++    + ++      +SG       +    Q+P +  
Subjt:  SLFKPIRPPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEEILLKHYETILHVRKRIGDFAELCFVSVDSLSTLHWRSGALGVRKFQHPICQLPRI--

Query:  -----------GVCVPRQ-----FIGLPRHGCGFFVDVSCSASRGVTGLGVVSVDEHGSIIGAKAKLVPSLYAILLVEMLAIKEGLRFSHGLLLVSEVVF
                    + +P +     ++  P        D + +     TG G +  +  G I+ A +K V   +   ++E L++  GL++     L    + 
Subjt:  -----------GVCVPRQ-----FIGLPRHGCGFFVDVSCSASRGVTGLGVVSVDEHGSIIGAKAKLVPSLYAILLVEMLAIKEGLRFSHGLLLVSEVVF

Query:  SDCHNVVGLLCGLSNSIAEVGVLVANIKTMLSAFRGMEFHHI
        +D   V   L  LS ++++   L+++I +++S F G++  H+
Subjt:  SDCHNVVGLLCGLSNSIAEVGVLVANIKTMLSAFRGMEFHHI

A0A803P8L6 Uncharacterized protein7.3e-2430.57Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLS---THGPWISRP
        MC  KE  G+ FR+ E FN+AL+AKQ  ++L++P+ L++KVLK  YFP  + LEA   +  S  WRG VWGRELL  G +  IGNGL+      PW+ R 
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLS---THGPWISRP

Query:  SLFKPIRPPSIDLVVEPHLVAHFIMLH-RHWNLDRLRVSLTEEEILLKHYETILHVRKRIGDFAELCFVSVDSLSTLHWRSGALGVR-KFQHPICQ----
        + F  +R     + V   +  H ++ H   W  D L      E+I    +   ++  +   D     F      +       A G + +F H   Q    
Subjt:  SLFKPIRPPSIDLVVEPHLVAHFIMLH-RHWNLDRLRVSLTEEEILLKHYETILHVRKRIGDFAELCFVSVDSLSTLHWRSGALGVR-KFQHPICQ----

Query:  --LPRIGVCVPRQFIGLPRHGCGFFVDVSCSASRGVTGLGVVSVDEHGSIIGAKAKLVPSLYAILLVEMLAIKEGLRFSHGLLLVSEVVFSDCHNVVGLL
          LP +    P  +   P        D S    +   GLG+V  D  G+++ A+   +P   ++ + E LAI+ GL+ +    L +  + SDC +V   L
Subjt:  --LPRIGVCVPRQFIGLPRHGCGFFVDVSCSASRGVTGLGVVSVDEHGSIIGAKAKLVPSLYAILLVEMLAIKEGLRFSHGLLLVSEVVFSDCHNVVGLL

Query:  CGLSNSIAEVGVLV
         G ++SI + G++V
Subjt:  CGLSNSIAEVGVLV

A0A803PS58 Uncharacterized protein3.3e-2429.18Show/hide
Query:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGL---STHGPWISRP
        MC  K+  G+  R F  FN+A++AKQ  R+L  P+ LL+KVLK +Y+P  S L+A   +  S  W+G  WGR LL  G++ +IG G        PW    
Subjt:  MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGL---STHGPWISRP

Query:  SLFKPIR---PPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEEILLKHYETILHVRKRIGDFAELCFVSVDSLSTLHWRSGALGVRKFQHPICQLPR
        S F+P     PP +       +V++ I   R W+L  L+   +  +   K++ +           A+L   S  S ST    + A  V   Q  I     
Subjt:  SLFKPIR---PPSIDLVVEPHLVAHFIMLHRHWNLDRLRVSLTEEEILLKHYETILHVRKRIGDFAELCFVSVDSLSTLHWRSGALGVRKFQHPICQLPR

Query:  IGVCVPRQFIGLPRHGCGFFVDVSCSASRGVTGLGVVSVDEHGSIIGAKAKLVPSLYAILLVEMLAIKEGLRFSHGLLLVSEVVFSDCHNVVGLLCGLSN
        +    P      P       VD +  +SR +TG+G +     GS+  A +K V   +A   +E +A+   L ++  L L   ++ +D   VV  LC  S+
Subjt:  IGVCVPRQFIGLPRHGCGFFVDVSCSASRGVTGLGVVSVDEHGSIIGAKAKLVPSLYAILLVEMLAIKEGLRFSHGLLLVSEVVFSDCHNVVGLLCGLSN

Query:  SIAEVGVLVANIKTMLSAFRGMEFHHIDK
        +I+    LV +I ++LS F  +   H+ +
Subjt:  SIAEVGVLVANIKTMLSAFRGMEFHHIDK

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003103.2e-1641.12Show/hide
Query:  MCLPKELE-GLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHGPWISRPSL
        +C  KE + GL FRD   FN+AL+AKQ  R++  P+ LLS++L+ +YFP  S++E       S+ WR  + GRELL  G+ R IG+G+ T   W+ R  +
Subjt:  MCLPKELE-GLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHGPWISRPSL

Query:  FKPIRPP
         +   PP
Subjt:  FKPIRPP

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.8e-1139.74Show/hide
Query:  GLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNG
        G+ F+D E FN AL+ KQ+ R+LS P  L++KV K +YF +   L A   +  SF W+     +E+L+ G +  +GNG
Subjt:  GLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNG

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-1741.12Show/hide
Query:  MCLPKELE-GLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHGPWISRPSL
        +C  KE + GL FRD   FN+AL+AKQ  R++  P+ LLS++L+ +YFP  S++E       S+ WR  + GRELL  G+ R IG+G+ T   W+ R  +
Subjt:  MCLPKELE-GLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHGPWISRPSL

Query:  FKPIRPP
         +   PP
Subjt:  FKPIRPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTACCTAAGGAGCTTGAGGGACTTAACTTTCGTGATTTTGAGGGATTTAATAAGGCTCTCATTGCGAAACAGGTGTGTCGGGTTCTTTCATCTCCTAACCTTTT
GCTTTCCAAAGTGTTGAAGTGTAAATATTTTCCGAGGGGATCTGTTTTGGAAGCTTTGAACTCTAATGTGGATTCGTTCTTTTGGAGAGGTTTTGTATGGGGCCGCGAGC
TTCTTAAACTTGGAATCCAACGGCGAATTGGGAATGGTTTATCTACTCATGGTCCATGGATCTCTCGACCCTCTCTTTTTAAGCCCATTCGACCTCCATCGATTGATTTG
GTTGTTGAACCCCACCTTGTTGCTCATTTTATAATGCTGCATCGTCATTGGAATTTGGATCGCCTTCGGGTGTCTCTTACTGAAGAGGAAATTTTGTTAAAGCATTATGA
AACTATTCTGCATGTGAGGAAGAGGATTGGGGACTTTGCGGAGCTTTGTTTTGTGTCGGTGGATTCCCTTTCCACTTTACATTGGCGATCTGGTGCATTGGGTGTTAGGA
AATTCCAGCATCCCATTTGCCAGCTTCCTCGCATTGGTGTTTGTGTTCCACGACAGTTTATTGGGCTTCCGAGACATGGTTGTGGCTTTTTTGTGGATGTGTCCTGCTCG
GCATCTCGGGGTGTGACGGGGCTTGGTGTAGTCTCAGTTGATGAGCATGGTTCTATTATAGGGGCAAAGGCTAAGTTAGTTCCAAGCCTGTATGCTATTTTATTGGTTGA
AATGTTGGCGATTAAAGAGGGACTACGGTTTTCTCATGGCTTGCTTCTTGTTTCCGAGGTGGTTTTCTCTGATTGCCATAATGTGGTCGGATTACTTTGTGGGCTTTCTA
ATTCTATTGCTGAAGTTGGGGTCCTAGTCGCTAACATCAAAACTATGTTGTCTGCATTCCGGGGTATGGAGTTTCACCATATTGACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTACCTAAGGAGCTTGAGGGACTTAACTTTCGTGATTTTGAGGGATTTAATAAGGCTCTCATTGCGAAACAGGTGTGTCGGGTTCTTTCATCTCCTAACCTTTT
GCTTTCCAAAGTGTTGAAGTGTAAATATTTTCCGAGGGGATCTGTTTTGGAAGCTTTGAACTCTAATGTGGATTCGTTCTTTTGGAGAGGTTTTGTATGGGGCCGCGAGC
TTCTTAAACTTGGAATCCAACGGCGAATTGGGAATGGTTTATCTACTCATGGTCCATGGATCTCTCGACCCTCTCTTTTTAAGCCCATTCGACCTCCATCGATTGATTTG
GTTGTTGAACCCCACCTTGTTGCTCATTTTATAATGCTGCATCGTCATTGGAATTTGGATCGCCTTCGGGTGTCTCTTACTGAAGAGGAAATTTTGTTAAAGCATTATGA
AACTATTCTGCATGTGAGGAAGAGGATTGGGGACTTTGCGGAGCTTTGTTTTGTGTCGGTGGATTCCCTTTCCACTTTACATTGGCGATCTGGTGCATTGGGTGTTAGGA
AATTCCAGCATCCCATTTGCCAGCTTCCTCGCATTGGTGTTTGTGTTCCACGACAGTTTATTGGGCTTCCGAGACATGGTTGTGGCTTTTTTGTGGATGTGTCCTGCTCG
GCATCTCGGGGTGTGACGGGGCTTGGTGTAGTCTCAGTTGATGAGCATGGTTCTATTATAGGGGCAAAGGCTAAGTTAGTTCCAAGCCTGTATGCTATTTTATTGGTTGA
AATGTTGGCGATTAAAGAGGGACTACGGTTTTCTCATGGCTTGCTTCTTGTTTCCGAGGTGGTTTTCTCTGATTGCCATAATGTGGTCGGATTACTTTGTGGGCTTTCTA
ATTCTATTGCTGAAGTTGGGGTCCTAGTCGCTAACATCAAAACTATGTTGTCTGCATTCCGGGGTATGGAGTTTCACCATATTGACAAATAA
Protein sequenceShow/hide protein sequence
MCLPKELEGLNFRDFEGFNKALIAKQVCRVLSSPNLLLSKVLKCKYFPRGSVLEALNSNVDSFFWRGFVWGRELLKLGIQRRIGNGLSTHGPWISRPSLFKPIRPPSIDL
VVEPHLVAHFIMLHRHWNLDRLRVSLTEEEILLKHYETILHVRKRIGDFAELCFVSVDSLSTLHWRSGALGVRKFQHPICQLPRIGVCVPRQFIGLPRHGCGFFVDVSCS
ASRGVTGLGVVSVDEHGSIIGAKAKLVPSLYAILLVEMLAIKEGLRFSHGLLLVSEVVFSDCHNVVGLLCGLSNSIAEVGVLVANIKTMLSAFRGMEFHHIDK