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PI0003340 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003340
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr07:15177747..15178971
RNA-Seq ExpressionPI0003340
SyntenyPI0003340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]3.7e-1039.5Show/hide
Query:  DDFMQELCDIDFDAED-LREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGL
        D     +CD     ED ++  ED +LVP  S + EVLE++VDDPL K              PSPPK+T+ Q D A E ++ + ++KFI    GKPM DG 
Subjt:  DDFMQELCDIDFDAED-LREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGL

Query:  EDIFQNQVDLHERAIKHEK
        ED+FQ Q +  E  ++ +K
Subjt:  EDIFQNQVDLHERAIKHEK

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]1.5e-1155.84Show/hide
Query:  APSPPKQTNDQQ-DIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDS---HHQ
        AP P KQ N+QQ + A E + +++++KFI +  GKP+MDG +D+FQNQVDL E   +HEKQI DLELKID+   HHQ
Subjt:  APSPPKQTNDQQ-DIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDS---HHQ

KAA0067817.1 hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]1.5e-1134.34Show/hide
Query:  EDLREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAI
        +++++ +DA LVP  S + EVLE+ +DD L K              PSPPKQ + QQD  T+E++DE+ Y                             +
Subjt:  EDLREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAI

Query:  KHEKQISDLELKIDSHHQSQHDQLAFEIASLKEQNKTMVTLIKKASLRSNRQYKSMMNYIHAAITSLVPKPAIPPQFEEPLSNVELD--AVLGPSETR
        K EK  SD+ +            L  +  +++ Q +TM T IK+ASL +  Q +++MNYIH  I SLVP P  PP+ EEPL+ VE    A + PSE R
Subjt:  KHEKQISDLELKIDSHHQSQHDQLAFEIASLKEQNKTMVTLIKKASLRSNRQYKSMMNYIHAAITSLVPKPAIPPQFEEPLSNVELD--AVLGPSETR

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]1.3e-1042.48Show/hide
Query:  LCDIDFDAED-LREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQN
        +CD     ED ++  ED +LVP  S + EVLE++VDDPL K              PSPPK+T+ Q D A E +E + ++KFI    GKPM DG ED+FQ 
Subjt:  LCDIDFDAED-LREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQN

Query:  QVDLHERAIKHEK
        Q +  E  ++ EK
Subjt:  QVDLHERAIKHEK

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]1.1e-0934.97Show/hide
Query:  NEGIDDFMQE-LCD-IDFDAEDLREAEDATLVPDDSQQTEVLEELVDDPLPK-------------APSPPKQ--------TNDQQDIATEENEDENFYKF
        +E + D +Q+ LCD + F  +  +E+E+ TL         +LE+ +DDPL K              PSPPKQ        T  ++ I  ++++DE ++KF
Subjt:  NEGIDDFMQE-LCD-IDFDAEDLREAEDATLVPDDSQQTEVLEELVDDPLPK-------------APSPPKQ--------TNDQQDIATEENEDENFYKF

Query:  INEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDS
        INE + +P+  G ED+FQ Q +L E  ++++K + DLELK DS
Subjt:  INEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDS

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein1.8e-1039.5Show/hide
Query:  DDFMQELCDIDFDAED-LREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGL
        D     +CD     ED ++  ED +LVP  S + EVLE++VDDPL K              PSPPK+T+ Q D A E ++ + ++KFI    GKPM DG 
Subjt:  DDFMQELCDIDFDAED-LREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGL

Query:  EDIFQNQVDLHERAIKHEK
        ED+FQ Q +  E  ++ +K
Subjt:  EDIFQNQVDLHERAIKHEK

A0A5A7U0L9 Uncharacterized protein7.3e-1255.84Show/hide
Query:  APSPPKQTNDQQ-DIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDS---HHQ
        AP P KQ N+QQ + A E + +++++KFI +  GKP+MDG +D+FQNQVDL E   +HEKQI DLELKID+   HHQ
Subjt:  APSPPKQTNDQQ-DIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDS---HHQ

A0A5A7VKU1 Uncharacterized protein7.3e-1234.34Show/hide
Query:  EDLREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAI
        +++++ +DA LVP  S + EVLE+ +DD L K              PSPPKQ + QQD  T+E++DE+ Y                             +
Subjt:  EDLREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAI

Query:  KHEKQISDLELKIDSHHQSQHDQLAFEIASLKEQNKTMVTLIKKASLRSNRQYKSMMNYIHAAITSLVPKPAIPPQFEEPLSNVELD--AVLGPSETR
        K EK  SD+ +            L  +  +++ Q +TM T IK+ASL +  Q +++MNYIH  I SLVP P  PP+ EEPL+ VE    A + PSE R
Subjt:  KHEKQISDLELKIDSHHQSQHDQLAFEIASLKEQNKTMVTLIKKASLRSNRQYKSMMNYIHAAITSLVPKPAIPPQFEEPLSNVELD--AVLGPSETR

A0A5D3D8Q5 Uncharacterized protein6.2e-1142.48Show/hide
Query:  LCDIDFDAED-LREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQN
        +CD     ED ++  ED +LVP  S + EVLE++VDDPL K              PSPPK+T+ Q D A E +E + ++KFI    GKPM DG ED+FQ 
Subjt:  LCDIDFDAED-LREAEDATLVPDDSQQTEVLEELVDDPLPKA-------------PSPPKQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQN

Query:  QVDLHERAIKHEK
        Q +  E  ++ EK
Subjt:  QVDLHERAIKHEK

A0A5D3E1H0 Uncharacterized protein5.2e-1034.97Show/hide
Query:  NEGIDDFMQE-LCD-IDFDAEDLREAEDATLVPDDSQQTEVLEELVDDPLPK-------------APSPPKQ--------TNDQQDIATEENEDENFYKF
        +E + D +Q+ LCD + F  +  +E+E+ TL         +LE+ +DDPL K              PSPPKQ        T  ++ I  ++++DE ++KF
Subjt:  NEGIDDFMQE-LCD-IDFDAEDLREAEDATLVPDDSQQTEVLEELVDDPLPK-------------APSPPKQ--------TNDQQDIATEENEDENFYKF

Query:  INEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDS
        INE + +P+  G ED+FQ Q +L E  ++++K + DLELK DS
Subjt:  INEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGCTTTCGGTGCGAGAAGGACACTATACAGAAGCACATTAAATGCTTCCCGCAAAAAGCACTTATAAATACCTTCAACTCCAAATTCATAATTATCAAGAGGAG
ACCATCCCGTAAGGATAGCCGGGGTGGAAAAGGCGAAAAAGAGGATGATGAAGTGGAGATTGATGATGAAGTGGAGATTGATGATGAAGAACTGGAAAGTCCAACAACAG
TCCCACTCATTCGCAAGAAGAAAGGCGAGGAAGAAGCCTCTAGGTCCAAGAAGAAGAAGAAGCATAAGGCTAAGGACCCTAGTGACCCTATTCCTCTCGCAATTGAAAGC
CTACCAAAACAGAAAAAACCTAAGTCCACCATCCCGCCTTCACCTCCCCAAGCAATAAAAGAACCACCACTTATCCCCATAATCCAAATTCCTTCTCCAAACATCCAAAA
CGCCAAGCTCTATCCACCAAGTCCAAATAATTACCACTATCACTTCCTCACGCTTAACGAAGGGATTGATGACTTCATGCAAGAACTCTGCGATATAGACTTTGATGCTG
AAGATTTAAGAGAAGCTGAGGACGCGACTCTAGTTCCTGATGACTCGCAACAAACAGAGGTTCTTGAGGAACTAGTTGATGACCCACTCCCCAAAGCTCCTTCACCGCCG
AAGCAAACAAATGACCAACAAGACATTGCGACGGAAGAAAATGAAGATGAAAATTTCTACAAATTCATCAATGAGGCGATTGGAAAGCCAATGATGGATGGACTTGAAGA
CATCTTCCAAAACCAAGTCGATCTGCATGAACGCGCGATAAAACATGAGAAGCAGATTTCGGACTTAGAGTTAAAAATTGATAGCCATCATCAATCCCAACATGACCAGC
TCGCCTTTGAGATTGCGAGCCTGAAGGAGCAAAATAAGACGATGGTAACTTTGATCAAGAAAGCTTCGTTGCGGTCGAACAGGCAATACAAATCAATGATGAACTACATT
CACGCGGCCATCACAAGTCTCGTGCCCAAGCCTGCCATACCGCCTCAGTTCGAAGAACCCCTTTCAAACGTTGAATTGGACGCTGTGCTAGGACCTTCTGAAACGCGGCT
ATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGCTTTCGGTGCGAGAAGGACACTATACAGAAGCACATTAAATGCTTCCCGCAAAAAGCACTTATAAATACCTTCAACTCCAAATTCATAATTATCAAGAGGAG
ACCATCCCGTAAGGATAGCCGGGGTGGAAAAGGCGAAAAAGAGGATGATGAAGTGGAGATTGATGATGAAGTGGAGATTGATGATGAAGAACTGGAAAGTCCAACAACAG
TCCCACTCATTCGCAAGAAGAAAGGCGAGGAAGAAGCCTCTAGGTCCAAGAAGAAGAAGAAGCATAAGGCTAAGGACCCTAGTGACCCTATTCCTCTCGCAATTGAAAGC
CTACCAAAACAGAAAAAACCTAAGTCCACCATCCCGCCTTCACCTCCCCAAGCAATAAAAGAACCACCACTTATCCCCATAATCCAAATTCCTTCTCCAAACATCCAAAA
CGCCAAGCTCTATCCACCAAGTCCAAATAATTACCACTATCACTTCCTCACGCTTAACGAAGGGATTGATGACTTCATGCAAGAACTCTGCGATATAGACTTTGATGCTG
AAGATTTAAGAGAAGCTGAGGACGCGACTCTAGTTCCTGATGACTCGCAACAAACAGAGGTTCTTGAGGAACTAGTTGATGACCCACTCCCCAAAGCTCCTTCACCGCCG
AAGCAAACAAATGACCAACAAGACATTGCGACGGAAGAAAATGAAGATGAAAATTTCTACAAATTCATCAATGAGGCGATTGGAAAGCCAATGATGGATGGACTTGAAGA
CATCTTCCAAAACCAAGTCGATCTGCATGAACGCGCGATAAAACATGAGAAGCAGATTTCGGACTTAGAGTTAAAAATTGATAGCCATCATCAATCCCAACATGACCAGC
TCGCCTTTGAGATTGCGAGCCTGAAGGAGCAAAATAAGACGATGGTAACTTTGATCAAGAAAGCTTCGTTGCGGTCGAACAGGCAATACAAATCAATGATGAACTACATT
CACGCGGCCATCACAAGTCTCGTGCCCAAGCCTGCCATACCGCCTCAGTTCGAAGAACCCCTTTCAAACGTTGAATTGGACGCTGTGCTAGGACCTTCTGAAACGCGGCT
ATAA
Protein sequenceShow/hide protein sequence
MECFRCEKDTIQKHIKCFPQKALINTFNSKFIIIKRRPSRKDSRGGKGEKEDDEVEIDDEVEIDDEELESPTTVPLIRKKKGEEEASRSKKKKKHKAKDPSDPIPLAIES
LPKQKKPKSTIPPSPPQAIKEPPLIPIIQIPSPNIQNAKLYPPSPNNYHYHFLTLNEGIDDFMQELCDIDFDAEDLREAEDATLVPDDSQQTEVLEELVDDPLPKAPSPP
KQTNDQQDIATEENEDENFYKFINEAIGKPMMDGLEDIFQNQVDLHERAIKHEKQISDLELKIDSHHQSQHDQLAFEIASLKEQNKTMVTLIKKASLRSNRQYKSMMNYI
HAAITSLVPKPAIPPQFEEPLSNVELDAVLGPSETRL