; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003367 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003367
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:10561037..10561745
RNA-Seq ExpressionPI0003367
SyntenyPI0003367
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.1e-4272.44Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIH Y NITRLYIT+ GAT    RSNN RL DV DD QQVLDICNNN+R++EEIH MY +PIVPP +H GRV+VEEAELDEVYHNVE++   TQ 
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEVGT
        Q+QTGYGSPM+MMP FG  YCD EV T
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEVGT

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.7e-5484.25Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIHWYNNITRLYITRP A VGHLRSNN RL DV DDPQQVL+ICNNN+RY+EEIH MYD+ IVPP VH GRVRVEEAELDEVYHNVE+VP  TQT
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEVGT
        QSQTGYGSPM MMP FGA Y DSEVGT
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEVGT

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.1e-5080.95Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIHWY+NITRLYITRPGA VG  RSNN RL DV DD QQ LDICNNNERY+EEIH MYD+PIVPP VH G VRVEEAELD+VYHNVE+VP  TQT
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEVG
        QSQTGYGSPM MMP F A YCD EVG
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEVG

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-5585.04Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIHWYNNITRLYITRPGA VGHLRSNN RL DV DDPQQVL+ICNNN+RY+EEIH MYD+ IVPP VH GRVRVEEAELDEVYHNVE+VP  TQT
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEVGT
        QSQTGYGSPM MMP FGA Y DSEVGT
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEVGT

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-5283.2Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIH YNNITRLYITRPGA VGHLRSNN RL DV +DPQQVLDICNNNERY+E+IH +YD+PIVPP VH  R RVEEAELDEVYHNVE+VP  TQT
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEV
        QSQTGYGSPM MMP FGA YCDSEV
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEV

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-4272.44Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIH Y NITRLYIT+ GAT    RSNN RL DV DD QQVLDICNNN+R++EEIH MY +PIVPP +H GRV+VEEAELDEVYHNVE++   TQ 
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEVGT
        Q+QTGYGSPM+MMP FG  YCD EV T
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEVGT

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-5484.25Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIHWYNNITRLYITRP A VGHLRSNN RL DV DDPQQVL+ICNNN+RY+EEIH MYD+ IVPP VH GRVRVEEAELDEVYHNVE+VP  TQT
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEVGT
        QSQTGYGSPM MMP FGA Y DSEVGT
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEVGT

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.4e-5080.95Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIHWY+NITRLYITRPGA VG  RSNN RL DV DD QQ LDICNNNERY+EEIH MYD+PIVPP VH G VRVEEAELD+VYHNVE+VP  TQT
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEVG
        QSQTGYGSPM MMP F A YCD EVG
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEVG

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-5585.04Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIHWYNNITRLYITRPGA VGHLRSNN RL DV DDPQQVL+ICNNN+RY+EEIH MYD+ IVPP VH GRVRVEEAELDEVYHNVE+VP  TQT
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEVGT
        QSQTGYGSPM MMP FGA Y DSEVGT
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEVGT

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein7.2e-5383.2Show/hide
Query:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT
        DVTQEYIH YNNITRLYITRPGA VGHLRSNN RL DV +DPQQVLDICNNNERY+E+IH +YD+PIVPP VH  R RVEEAELDEVYHNVE+VP  TQT
Subjt:  DVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLVTQT

Query:  QSQTGYGSPMMMMPAFGARYCDSEV
        QSQTGYGSPM MMP FGA YCDSEV
Subjt:  QSQTGYGSPMMMMPAFGARYCDSEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACCATCAGTCTTCTCGTTTGTTTTCATATTGGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAAC
TGTAGGTCATCTGAGATCGAACAATAGAAGACTTTGTGATGTTACAGATGATCCACAACAAGTCCTTGATATATGTAATAATAACGAGAGGTACGTGGAGGAGATACATT
ATATGTATGATATACCTATTGTACCTCCACTAGTTCATTGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTAGAAAAAGTGCCTCTAGTG
ACACAAACACAGAGCCAAACTGGTTATGGTAGTCCAATGATGATGATGCCAGCATTTGGAGCAAGATATTGTGATTCTGAGGTCGGTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACCATCAGTCTTCTCGTTTGTTTTCATATTGGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAAC
TGTAGGTCATCTGAGATCGAACAATAGAAGACTTTGTGATGTTACAGATGATCCACAACAAGTCCTTGATATATGTAATAATAACGAGAGGTACGTGGAGGAGATACATT
ATATGTATGATATACCTATTGTACCTCCACTAGTTCATTGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTAGAAAAAGTGCCTCTAGTG
ACACAAACACAGAGCCAAACTGGTTATGGTAGTCCAATGATGATGATGCCAGCATTTGGAGCAAGATATTGTGATTCTGAGGTCGGTACATGA
Protein sequenceShow/hide protein sequence
MADHQSSRLFSYWDVTQEYIHWYNNITRLYITRPGATVGHLRSNNRRLCDVTDDPQQVLDICNNNERYVEEIHYMYDIPIVPPLVHWGRVRVEEAELDEVYHNVEKVPLV
TQTQSQTGYGSPMMMMPAFGARYCDSEVGT