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PI0003370 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003370
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:17337622..17339003
RNA-Seq ExpressionPI0003370
SyntenyPI0003370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.3e-9269.62Show/hide
Query:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY
        +APQL HAN+HLLPGRA GSRW DQFCVTR ATHVVSQYRYMFDLLQRDQ                                            DVTQEY
Subjt:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY

Query:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRP AAVGHLRSNN RLRDVADD QQV++ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYL
        GSPM MMP F AGYYDSEVGTGY D+G+ PS  YMD GPS  YM  HGH RG GEHN+YL
Subjt:  GSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.2e-8580.77Show/hide
Query:  QRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP
        Q D+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDVADDLQQ + ICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNVEEVP 
Subjt:  QRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP

Query:  VTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQ
         TQTQSQTGYGSPM MMP FEAGY D EVG GY D+GVGPS SY+D  PSTSYM  HGH RG GEHNEYLY+EAP DV D QEYQQEPENQE+  Q RVQ
Subjt:  VTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQ

Query:  SRRRQPTR
        SRRRQPTR
Subjt:  SRRRQPTR

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]3.9e-7371.36Show/hide
Query:  MFDLLQRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV
        MFDLLQRDQ + + Y    +N+   +           RSNN RLRDVADDLQQ + ICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNV
Subjt:  MFDLLQRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV

Query:  EEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELG
        EEVP  TQTQSQTGYGSPM MMP FEAGY D EVG GY D+GVGPS SY+D  PSTSYM  HGH RG GEHNEYLY+EAP DV D QEYQQEPENQE+  
Subjt:  EEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELG

Query:  QPRVQSRRRQPTR
        Q RVQSRRRQPTR
Subjt:  QPRVQSRRRQPTR

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-8566.92Show/hide
Query:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY
        +APQL HAN+HLLPGRA GS         R ATHVVSQYRYMFDLLQRDQ                                            DVTQEY
Subjt:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY

Query:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRPGAAVGHLRSNN RLRDVADD QQV++ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYL
        GSPM MMP F AGYYDSEVGTGY D+G+ PS  YMD GPS  YM  HGH RG GEHN+YL
Subjt:  GSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.1e-9962.85Show/hide
Query:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------
        +APQL H NDHLL GRA GSRW DQFCV RSAT+VV+QYRYMFDLLQRDQ                                                  
Subjt:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------

Query:  -------------------DVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEE
                           DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +D QQV+ ICNNNERYME+IH +YD+PIVPPPV+R R RVEE
Subjt:  -------------------DVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEE

Query:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQ
         ELDEVYHNVEEVPP TQTQSQTGYGSPM MMP F AGY DSEV  GY D+ VGP  SYMD GPSTSYM  +GHGRG GEHNEYLY+EAPTDV D QEYQ
Subjt:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQ

Query:  QEPENQEELGQPRVQSRRRQPTR
        QEP+NQE+  Q RVQSRRRQP R
Subjt:  QEPENQEELGQPRVQSRRRQPTR

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.3e-9369.62Show/hide
Query:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY
        +APQL HAN+HLLPGRA GSRW DQFCVTR ATHVVSQYRYMFDLLQRDQ                                            DVTQEY
Subjt:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY

Query:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRP AAVGHLRSNN RLRDVADD QQV++ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYL
        GSPM MMP F AGYYDSEVGTGY D+G+ PS  YMD GPS  YM  HGH RG GEHN+YL
Subjt:  GSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.7e-8680.77Show/hide
Query:  QRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP
        Q D+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDVADDLQQ + ICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNVEEVP 
Subjt:  QRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP

Query:  VTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQ
         TQTQSQTGYGSPM MMP FEAGY D EVG GY D+GVGPS SY+D  PSTSYM  HGH RG GEHNEYLY+EAP DV D QEYQQEPENQE+  Q RVQ
Subjt:  VTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQ

Query:  SRRRQPTR
        SRRRQPTR
Subjt:  SRRRQPTR

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X21.9e-7371.36Show/hide
Query:  MFDLLQRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV
        MFDLLQRDQ + + Y    +N+   +           RSNN RLRDVADDLQQ + ICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNV
Subjt:  MFDLLQRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNV

Query:  EEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELG
        EEVP  TQTQSQTGYGSPM MMP FEAGY D EVG GY D+GVGPS SY+D  PSTSYM  HGH RG GEHNEYLY+EAP DV D QEYQQEPENQE+  
Subjt:  EEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELG

Query:  QPRVQSRRRQPTR
        Q RVQSRRRQPTR
Subjt:  QPRVQSRRRQPTR

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.4e-8666.92Show/hide
Query:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY
        +APQL HAN+HLLPGRA GS         R ATHVVSQYRYMFDLLQRDQ                                            DVTQEY
Subjt:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DVTQEY

Query:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRPGAAVGHLRSNN RLRDVADD QQV++ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYL
        GSPM MMP F AGYYDSEVGTGY D+G+ PS  YMD GPS  YM  HGH RG GEHN+YL
Subjt:  GSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.0e-9962.85Show/hide
Query:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------
        +APQL H NDHLL GRA GSRW DQFCV RSAT+VV+QYRYMFDLLQRDQ                                                  
Subjt:  MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------

Query:  -------------------DVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEE
                           DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +D QQV+ ICNNNERYME+IH +YD+PIVPPPV+R R RVEE
Subjt:  -------------------DVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEE

Query:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQ
         ELDEVYHNVEEVPP TQTQSQTGYGSPM MMP F AGY DSEV  GY D+ VGP  SYMD GPSTSYM  +GHGRG GEHNEYLY+EAPTDV D QEYQ
Subjt:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQ

Query:  QEPENQEELGQPRVQSRRRQPTR
        QEP+NQE+  Q RVQSRRRQP R
Subjt:  QEPENQEELGQPRVQSRRRQPTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGATGGATAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAG
TCAGTATAGATACATGTTTGATCTTCTTCAACGTGATCAGGATGTGACTCAAGAATACATCCATTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAG
CTGTGGGTCATTTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCTGCAACAAGTCATTCATATATGTAATAATAATGAGAGGTACATGGAGGAGATACAT
TATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGT
GACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGAAGCAGGATATTATGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGG
TCGGTCCATCATTTTCATACATGGATGCCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCA
CCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCGAATCGACGA
CGTCCGGGTTGTGGAACACATTGATTTTCTTTTATATTTTAAATTAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGATGGATAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAG
TCAGTATAGATACATGTTTGATCTTCTTCAACGTGATCAGGATGTGACTCAAGAATACATCCATTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAG
CTGTGGGTCATTTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCTGCAACAAGTCATTCATATATGTAATAATAATGAGAGGTACATGGAGGAGATACAT
TATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGT
GACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGAAGCAGGATATTATGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGG
TCGGTCCATCATTTTCATACATGGATGCCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCA
CCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCGAATCGACGA
CGTCCGGGTTGTGGAACACATTGATTTTCTTTTATATTTTAAATTAATGTAA
Protein sequenceShow/hide protein sequence
MAPQLRHANDHLLPGRAHGSRWIDQFCVTRSATHVVSQYRYMFDLLQRDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDLQQVIHICNNNERYMEEIH
YMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYYDSEVGTGYNDSGVGPSFSYMDAGPSTSYMHGHGHGRGRGEHNEYLYYEA
PTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRIDDVRVVEHIDFLLYFKLM